Spontaneous mutant frequency and mutation spectrum for gene A of ΦX174 grown in E. coli

Environmental and Molecular Mutagenesis

Volumn 44, Issue 2, 2004, Pages 119-127

  Raney, Jessica L ^a   Delongchamp, Robert R ^a   Valentine, Carrie R ^a  

^a NATIONAL CENTER FOR TOXICOLOGICAL RESEARCH   (United States)

Author keywords

Mutant spectra; Single burst analysis; Spontaneous mutant frequency

Indexed keywords

DNA;

ANIMAL CELL; ARTICLE; EMBRYO; ESCHERICHIA COLI; GENE; GENE A; GENE MUTATION; MOUSE; MUTANT; MUTANT SPECTRUM; NONHUMAN; PHIX174 GENE A; SPONTANEOUS MUTANT FREQUENCY; TRANSGENE; TRANSGENIC MOUSE; VIRUS MUTANT;

BACTERIOPHAGE PHI X 174; ESCHERICHIA COLI; GENES, VIRAL; MUTATION;

ANIMALIA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; MAMMALIA; MUS MUSCULUS; PROKARYOTA;

EID: 4043051461     PISSN: 08936692     EISSN: None     Source Type: Journal    
DOI: 10.1002/em.20041     Document Type: Article

References (36)

1. Burkhart JG, Burkhart BA, Sampson K, Malling HV. 1992. Evidence for a previously undetected CpG methyl-directed restriction system in E. coli. Nucl Acids Res 20:4368.
2. Cariello NF, Piegorsch WW, Adams WT, Skopek TR. 1994. Computer program for the analysis of mutational spectra: application of p53 mutations. Carcinogenesis 15:2281-2285.
3. Casadaban MJ, Cohen SN. 1980. Analysis of gene control signals by DNA fusion and cloning in Escherichia coli. J Mol Biol 138:179-207.
4. Chambers RW. 1989. On the nature of suppression by Escherichia coli HF4714. Mutat Res 210:207-209.
5. Chen T, Mittelstaedt RA, Shelton SD, Dass SB, Manjanatha MG, Casciano DA, Heflich RH. 2001. Gene- and tissue-specificity of mutation in Big Blue rats treated with the hepatocarcinogen N-hydroxy-2-acetylaminofluorene. Environ Mol Mutagen 37:203-214.
6. Chen T, da Costa GG, Marques MM, Shelton SD, Beland FA, Manjanatha MG. 2002. Mutations induced by α-hydroxytamoxifen in the lacI and cH gene of Big Blue transgenic rats. Carcinogen 23:1751-1757.
7. Delongchamp RR, Valentine CR, Malling HV. 2001. Estimation of the average burst size of ΦX174am3,cs70 for use in mutation assays with transgenic mice. Environ Mol Mutagen 37:356-360.
8. Dollé MET, Snyder WK, Dunson DB, Vijg J. 2002. Mutational fingerprints of aging. Nucl Acids Res 30:545-549
9. Drake JW. 1991. A constant rate of spontaneous mutation in DNA-based microbes. Proc Natl Acad Sci USA 88:7160-7164.
10. Eggertsson G, Söll D. 1988. Transfer ribonucleic acid-mediated suppression of termination codons in Escherichi coli. Microbiol Rev 52: 354-324.
11. Ekechukwu MC, Oberste DJ, Fane BA. 1995. Host and ΦX174 mutations affecting the morphogenesis of the 50S complex, a single-stranded DNA synthesizing intermediate. Genetics 140:1167-1174.
12. Fane BA, Hayashi M. 1991. Second-site suppressors of a cold-sensitive prohead accessory protein of bacteriophage ΦX174. Genetics 128: 663-671.
13. Grant SGN, Jessee J, Bloom FR, Hanahan D. 1990. Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants. Proc Natl Acad Sci USA 87:4645-4649.
14. Hayashi M, Aoyama A, Richardson DL Jr, Hayashi MN. 1988. Biology of the bacteriophage ΦX174. In: Calendar R, editor. The bacteriophages, vol. 2. New York: Plenum. p 1-71.
15. Hill KA, Buettner VL, Glickman BW, Sommer SS. 1999. Spontaneous mutations in the Big Blue transgenic system are primarily mouse derived. Mutat Res 436:11-19.
16. Kohara A, Suzuki T, Honma M, Hirano N, Ohsawa K-I, Ohwada T, Hayashi M. 2001. Mutation spectrum of o-aminoazotoluene in the cII gene of lambda/lacZ transgenic mice (Muta mouse). Mutat Res 491:211-220.
17. Kohler SW, Provost GS, Fieck A, Kretz P, Bullock WO, Sorge JA, Putman DL, Short JM. 1991 Spectra of spontaneous and mutagen-induced mutations in the lacI gene in transgenic mice. Proc Natl Acad Sci USA 88:7958-7962.
18. Lindahl T, Nyberg B. 1974. Heat-induced deamiation of cytosine residues in deoxyribonucleic acid. Biochemistry 13:3405-3410.
19. Louro H, Silva MJ, Boavida MG. 2002. Mutagenic activity of cisplatin in the lacZ plasmid-based transgenic mouse model. Environ Mol Mutagen 40:283-291.
20. Luria SE, Delbrück M. 1943. Mutations of bacteria from virus sensitivity to virus resistance. Genetics 28:491-511.
21. Maki H. 2002. Origins of spontaneous mutations: specificity and directionality of base substitution, frameshift, and sequence substitution mutatgenesis. Ann Rev Genet 36:279-303.
22. Malling HV, Delongchamp RR. 2001. Direct separation of in vivo and in vitro am3 revertants in transgenic mice carrying the ΦX174 am3, cs70 vector. Environ Mol Mutagen 37:345-355.
23. Malling HV, Delongchamp RR, Valentine CR. 2003. Three origins of ΦX174 am3 revertants in transgenic cell culture. Environ Mol Mutagen 42:258-273.
24. Masumura K, Matsui M, Katoh M, Horiya N, Ueda O, Tanabe H, Yamada M, Suzuki H, Sofuni T, Nohmi T. 1999. Spectra of gpt mutations in ethylnitrosourea-treated and untreated transgenic mice. Environ Mol Mutagen 43:1-8.
25. Ono T, Ikehata H, Nakamura S, Saito Y, Komura J, Hosoi Y, Yamamoto K. 1999. Molecular nature of mutations induced by a high dose of X-rays in spleen, liver, and brain of the lacZ-transgenic mouse. Environ Mol Mutagen 34:97-105.
26. Ono T, Ikehata H, Nakamura S, Saito Y, Hosoi Y, Takai Y, Yamada S, Onodera J, Yamamoto K. 2000. Age-associated increase of spontaneous mutant frequency and molecular nature of mutation in newborn and old lacZ-transgenic mouse. Mutat Res 447:165-177.
27. Paashuis-Lew Y, Zhang SB, Heddle JA. 1997. On the origin of spontaneous somatic mutations and sectored plaques detected in transgenic mice. Mutat Res 373:277-284.
28. Sanger F, Coulson AR, Friedman T, Air GM, Barrell BG, Brown NL, Fiddes JC, Hutchison CA III, Slocombe PM, Smith M. 1978. The nucleotide sequence of bacteriophage ΦX174. J Mol Biol 125:225-246.
29. Schaaper RM, Dunn RL. 1991. Spontaneous mutation in the Escherichia coli lacI gene. Genetics 129:317-326.
30. 6-alkylguanine-DNA alkyltransferase defieciency in Eschierichia coli as the host of the detection of mutations in lacI transgenic mice. Environ Mol Mutagen 34:221-226.
31. Valentine CR, Montgomery BA, Miller SG, Delongchamp RR, Fane BA, Malling HV. 2002. Characterization of mutant spectra generated by a forward mutational assay for gene A of ΦX174 from ENU-treated transgenic mouse embryonic cell line PX-2. Environ Mol Mutagen 39:55-68.
32. Valentine CR, Raney JL, Shaddock JG, Dobrovolsky VN, Delongchamp RR. 2004. Determination of experimental parameters for single burst analysis applied to the forward assay for gene A of bacteriophage ΦX174 from mouse splenic lymphocytes. Environ Mol Mutagen 44:128-149.
33. Wolfram S. 1999. The Mathematica book, 4th ed. New York: Wolfram Media/Cambridge University Press.
34. Yamada K, Suzuki T, Kohara A, Hayashi M, Hakura A, Mizutani T, Saeki K-I. 2002. Effect of 10-aza-substitution on benzo[a]pyrene mutagenicity in vivo and in vitro. Mutat Res 521:187-200.
35. Yatagai F, Glickman BW. 1990. Specificity of spontaneous mutation in the lacI gene cloned into bacteriophage M13. Mutat Res 243:21-28.
36. Zhang XB, Urlando C, Tao KS, Heddle JA. 1995. Factors affecting somatic mutation frequencies in vivo. Mutat Res 338:189-201.