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Volumn 18, Issue 12, 2007, Pages 5100-5112

Acclimation of Saccharomyces cerevisiae to low temperature: A chemostat-based transcriptome analysis

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; COLD SHOCK PROTEIN; GLUCOSE; TRANSCRIPTOME;

EID: 37048999147     PISSN: 10591524     EISSN: None     Source Type: Journal    
DOI: 10.1091/mbc.E07-02-0131     Document Type: Article
Times cited : (104)

References (79)
  • 1
    • 0035050040 scopus 로고    scopus 로고
    • Reciprocal regulation of anaerobic and aerobic cell wall mannoprotein gene expression in Saccharomyces cerevisiae
    • Abramova, N., Sertil, O., Mehta, S., and Lowry, C. V. (2001). Reciprocal regulation of anaerobic and aerobic cell wall mannoprotein gene expression in Saccharomyces cerevisiae. J. Bacteriol. 183, 2881-2887.
    • (2001) J. Bacteriol , vol.183 , pp. 2881-2887
    • Abramova, N.1    Sertil, O.2    Mehta, S.3    Lowry, C.V.4
  • 2
    • 0035064786 scopus 로고    scopus 로고
    • Hsf1p and Msn2/4p cooperate in the expression of Saccharomyces cerevisiae genes HSP26 and HSP104 in a gene- and stress type-dependent manner
    • Amoros, M., and Estruch, F. (2001). Hsf1p and Msn2/4p cooperate in the expression of Saccharomyces cerevisiae genes HSP26 and HSP104 in a gene- and stress type-dependent manner. Mol. Microbiol. 39, 1523-1532.
    • (2001) Mol. Microbiol , vol.39 , pp. 1523-1532
    • Amoros, M.1    Estruch, F.2
  • 3
    • 0002587184 scopus 로고
    • Anaerobic nutrition of Saccharomyces cerevisiae. I. Ergosterol requirement for growth in a defined medium
    • Andreasen, A. A., and Stier, T. J. (1953). Anaerobic nutrition of Saccharomyces cerevisiae. I. Ergosterol requirement for growth in a defined medium. J. Cell. Physiol. 41, 23-36.
    • (1953) J. Cell. Physiol , vol.41 , pp. 23-36
    • Andreasen, A.A.1    Stier, T.J.2
  • 4
    • 0000493179 scopus 로고
    • Anaerobic nutrition of Saccharomyces cerevisiae. II. Unsaturated fatty acid requirement for growth in a defined medium
    • Andreasen, A. A., and Stier, T. J. (1954). Anaerobic nutrition of Saccharomyces cerevisiae. II. Unsaturated fatty acid requirement for growth in a defined medium. J. Cell. Physiol. 43, 271-281.
    • (1954) J. Cell. Physiol , vol.43 , pp. 271-281
    • Andreasen, A.A.1    Stier, T.J.2
  • 5
    • 0036001334 scopus 로고    scopus 로고
    • Stt4 PI 4-kinase localizes to the plasma membrane and functions in the Pkc1-mediated MAP kinase cascade
    • Audhya, A., and Emr, S. D. (2002). Stt4 PI 4-kinase localizes to the plasma membrane and functions in the Pkc1-mediated MAP kinase cascade. Dev. Cell 2, 593-605.
    • (2002) Dev. Cell , vol.2 , pp. 593-605
    • Audhya, A.1    Emr, S.D.2
  • 6
    • 0024299523 scopus 로고
    • Reconstitution of SEC gene product-dependent intercompartmental protein transport
    • Baker, D., Hicke, L., Rexach, M., Schleyer, M., and Schekman, R. (1988). Reconstitution of SEC gene product-dependent intercompartmental protein transport. Cell 54, 335-344.
    • (1988) Cell , vol.54 , pp. 335-344
    • Baker, D.1    Hicke, L.2    Rexach, M.3    Schleyer, M.4    Schekman, R.5
  • 7
    • 0033893839 scopus 로고    scopus 로고
    • The mitochondrial alcohol dehydrogenase Adh3p is involved in a redox shuttle in Saccharomyces cerevisiae
    • Bakker, B. M., Bro, C., Kötter, P., Luttik, M. A., van Dijken, J. P., and Pronk, J. T. (2000). The mitochondrial alcohol dehydrogenase Adh3p is involved in a redox shuttle in Saccharomyces cerevisiae. J. Bacteriol. 182, 4730-4737.
    • (2000) J. Bacteriol , vol.182 , pp. 4730-4737
    • Bakker, B.M.1    Bro, C.2    Kötter, P.3    Luttik, M.A.4    van Dijken, J.P.5    Pronk, J.T.6
  • 8
    • 33751296527 scopus 로고    scopus 로고
    • Integration of transcriptomic and metabolic analyses for understanding the global responses of low-temperature winemaking fermentations
    • Beltran, G., Novo, M., Leberre, V., Sokol, S., Labourdette, D., Guillamon, J. M., Mas, A., Francois, J., and Rozes, N. (2006). Integration of transcriptomic and metabolic analyses for understanding the global responses of low-temperature winemaking fermentations. FEMS Yeast Res. 6, 1167-1183.
    • (2006) FEMS Yeast Res , vol.6 , pp. 1167-1183
    • Beltran, G.1    Novo, M.2    Leberre, V.3    Sokol, S.4    Labourdette, D.5    Guillamon, J.M.6    Mas, A.7    Francois, J.8    Rozes, N.9
  • 9
    • 0031910875 scopus 로고    scopus 로고
    • Msn2p and Msn4p control a large number of genes induced at the diauxic transition which are repressed by cyclic AMP in Saccharomyces cerevisiae
    • Boy-Marcotte, E., Perrot, M., Bussereau, F., Boucherie, H., and Jacquet, M. (1998). Msn2p and Msn4p control a large number of genes induced at the diauxic transition which are repressed by cyclic AMP in Saccharomyces cerevisiae. J. Bacteriol. 180, 1044-1052.
    • (1998) J. Bacteriol , vol.180 , pp. 1044-1052
    • Boy-Marcotte, E.1    Perrot, M.2    Bussereau, F.3    Boucherie, H.4    Jacquet, M.5
  • 10
    • 0031904230 scopus 로고    scopus 로고
    • Multiple duplications of yeast hexose transport genes in response to selection in a glucose-limited environment
    • Brown, C. J., Todd, K. M., and Rosenzweig, R. F. (1998). Multiple duplications of yeast hexose transport genes in response to selection in a glucose-limited environment. Mol. Biol. Evol. 15, 931-942.
    • (1998) Mol. Biol. Evol , vol.15 , pp. 931-942
    • Brown, C.J.1    Todd, K.M.2    Rosenzweig, R.F.3
  • 11
    • 34247630099 scopus 로고    scopus 로고
    • Growth control of the eukaryote cell: A systems biology study in yeast
    • doi:10.1186/jbiol54
    • Castrillo, J. I. et al. (2007). Growth control of the eukaryote cell: a systems biology study in yeast. J. Biol. 6, 4 (doi:10.1186/jbiol54).
    • (2007) J. Biol , vol.6 , pp. 4
    • Castrillo, J.I.1
  • 12
    • 0035253751 scopus 로고    scopus 로고
    • Induction and repression of DAN1 and the family of anaerobic mannoprotein genes in Saccharomyces cerevisiae occurs through a complex array of regulatory sites
    • Cohen, B. D., Sertil, O., Abramova, N. E., Davies, K. J., and Lowry, C. V. (2001). Induction and repression of DAN1 and the family of anaerobic mannoprotein genes in Saccharomyces cerevisiae occurs through a complex array of regulatory sites. Nucleic Acids Res. 29, 799-808.
    • (2001) Nucleic Acids Res , vol.29 , pp. 799-808
    • Cohen, B.D.1    Sertil, O.2    Abramova, N.E.3    Davies, K.J.4    Lowry, C.V.5
  • 13
    • 0036024577 scopus 로고    scopus 로고
    • Transmitting the signal of excess nitrogen in Saccharomyces cerevisiae from the Tor proteins to the GATA factors: Connecting the dots
    • Cooper, T. G. (2002). Transmitting the signal of excess nitrogen in Saccharomyces cerevisiae from the Tor proteins to the GATA factors: connecting the dots. FEMS Microbiol. Rev. 26, 223-238.
    • (2002) FEMS Microbiol. Rev , vol.26 , pp. 223-238
    • Cooper, T.G.1
  • 14
    • 0025983819 scopus 로고
    • Expression of the DAL80 gene, whose product is homologous to the GATA factors and is a negative regulator of multiple nitrogen catabolic genes in Saccharomyces cerevisiae, is sensitive to nitrogen catabolite repression
    • Cunningham, T. S., and Cooper, T. G. (1991). Expression of the DAL80 gene, whose product is homologous to the GATA factors and is a negative regulator of multiple nitrogen catabolic genes in Saccharomyces cerevisiae, is sensitive to nitrogen catabolite repression. Mol. Cell. Biol. 11, 6205-6215.
    • (1991) Mol. Cell. Biol , vol.11 , pp. 6205-6215
    • Cunningham, T.S.1    Cooper, T.G.2
  • 15
    • 1542350073 scopus 로고    scopus 로고
    • Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study
    • Daran-Lapujade, P., Jansen, M. L., Daran, J. M., van Gulik, W., de Winde, J. H., and Pronk, J. T. (2004). Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study. J. Biol. Chem. 279, 9125-9138.
    • (2004) J. Biol. Chem , vol.279 , pp. 9125-9138
    • Daran-Lapujade, P.1    Jansen, M.L.2    Daran, J.M.3    van Gulik, W.4    de Winde, J.H.5    Pronk, J.T.6
  • 16
    • 22044443709 scopus 로고    scopus 로고
    • The Sequence Ontology: A tool for the unification of genome annotations
    • doi: 10.1186/gb-2005-6-5-r44
    • Eilbeck, K., Lewis, S. E., Mungall, C. J., Yandell, M., Stein, L., Durbin, R. and Ashburner, M. (2005). The Sequence Ontology: a tool for the unification of genome annotations. Genome Biol. 6, R44 (doi: 10.1186/gb-2005-6-5-r44).
    • (2005) Genome Biol , vol.6
    • Eilbeck, K.1    Lewis, S.E.2    Mungall, C.J.3    Yandell, M.4    Stein, L.5    Durbin, R.6    Ashburner, M.7
  • 17
    • 0031721651 scopus 로고    scopus 로고
    • Effect of temperature on in vivo protein synthetic capacity in Escherichia coli
    • Farewell, A., and Neidhardt, F. C. (1998). Effect of temperature on in vivo protein synthetic capacity in Escherichia coli. J. Bacteriol. 180, 4704-4710.
    • (1998) J. Bacteriol , vol.180 , pp. 4704-4710
    • Farewell, A.1    Neidhardt, F.C.2
  • 19
    • 0035161939 scopus 로고    scopus 로고
    • Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae
    • François, J., and Parrou, J. L. (2001). Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae. FEMS Microbiol. Rev. 25, 125-145.
    • (2001) FEMS Microbiol. Rev , vol.25 , pp. 125-145
    • François, J.1    Parrou, J.L.2
  • 20
    • 0032913365 scopus 로고    scopus 로고
    • Structure of the glucan-binding sugar chain of Tip1p, a cell wall protein of Saccharomyces cerevisiae
    • Fujii, T., Shimoi, H., and Iimura, Y. (1999). Structure of the glucan-binding sugar chain of Tip1p, a cell wall protein of Saccharomyces cerevisiae. Biochim. Biophys. Acta 1427, 133-144.
    • (1999) Biochim. Biophys. Acta , vol.1427 , pp. 133-144
    • Fujii, T.1    Shimoi, H.2    Iimura, Y.3
  • 22
    • 0026031060 scopus 로고
    • Lipid content and cryotolerance of Bakers' yeast in frozen doughs
    • Gelinas, P., Fiset, G., Willemot, C., and Goulet, J. (1991). Lipid content and cryotolerance of Bakers' yeast in frozen doughs. Appl. Environ. Microbiol. 57, 463-468.
    • (1991) Appl. Environ. Microbiol , vol.57 , pp. 463-468
    • Gelinas, P.1    Fiset, G.2    Willemot, C.3    Goulet, J.4
  • 24
    • 4544352942 scopus 로고    scopus 로고
    • Transcriptional regulatory code of a eukaryotic genome
    • Harbison, C. T. et al. (2004). Transcriptional regulatory code of a eukaryotic genome. Nature 431, 99-104.
    • (2004) Nature , vol.431 , pp. 99-104
    • Harbison, C.T.1
  • 26
    • 0038686802 scopus 로고    scopus 로고
    • Yeast gene expression during growth at low temperature
    • Homma, T., Iwahashi, H., and Komatsu, Y. (2003). Yeast gene expression during growth at low temperature. Cryobiology 46, 230-237.
    • (2003) Cryobiology , vol.46 , pp. 230-237
    • Homma, T.1    Iwahashi, H.2    Komatsu, Y.3
  • 27
    • 22944442648 scopus 로고    scopus 로고
    • Comparative analysis of promoter regions containing binding sites of the heterodimeric transcription factor Ino2/Ino4 involved in yeast phospholipid biosynthesis
    • Hoppen, J., Repenning, A., Albrecht, A., Geburtig, S., and Schuller, H. J. (2005). Comparative analysis of promoter regions containing binding sites of the heterodimeric transcription factor Ino2/Ino4 involved in yeast phospholipid biosynthesis. Yeast 22, 601-613.
    • (2005) Yeast , vol.22 , pp. 601-613
    • Hoppen, J.1    Repenning, A.2    Albrecht, A.3    Geburtig, S.4    Schuller, H.J.5
  • 28
    • 27144469038 scopus 로고    scopus 로고
    • Continuous culture - making a comeback?
    • Hoskisson, P. A., and Hobbs, G. (2005). Continuous culture - making a comeback? Microbiology 151, 3153-3159.
    • (2005) Microbiology , vol.151 , pp. 3153-3159
    • Hoskisson, P.A.1    Hobbs, G.2
  • 29
    • 34547589578 scopus 로고    scopus 로고
    • DAVID Bioinformatics Resources: Expanded annotation database and novel algorithms to better extract biology from large gene lists
    • doi:10.1093/nar/gkm415
    • Huang, D. W. et al. (2007). DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists. Nucleic Acids Res. (doi:10.1093/nar/gkm415).
    • (2007) Nucleic Acids Res
    • Huang, D.W.1
  • 30
    • 0015514736 scopus 로고
    • Lipid composition of Saccharomyces cerevisiae as influenced by growth temperature
    • Hunter, K., and Rose, A. H. (1972). Lipid composition of Saccharomyces cerevisiae as influenced by growth temperature. Biochim. Biophys. Acta 260, 639-653.
    • (1972) Biochim. Biophys. Acta , vol.260 , pp. 639-653
    • Hunter, K.1    Rose, A.H.2
  • 31
    • 3142675034 scopus 로고    scopus 로고
    • Specific growth rate and not cell density controls the general stress response in Escherichia coli
    • Ihssen, J., and Egli, T. (2004). Specific growth rate and not cell density controls the general stress response in Escherichia coli. Microbiology 150, 1637-1648.
    • (2004) Microbiology , vol.150 , pp. 1637-1648
    • Ihssen, J.1    Egli, T.2
  • 32
    • 19044396051 scopus 로고    scopus 로고
    • Prolonged selection in aerobic, glucose-limited chemostat cultures of Saccharomyces cerevisiae causes a partial loss of glycolytic capacity
    • Jansen, M. L., Diderich, J. A., Mashego, M., Hassane, A., de Winde, J. H., Daran-Lapujade, P., and Pronk, J. T. (2005). Prolonged selection in aerobic, glucose-limited chemostat cultures of Saccharomyces cerevisiae causes a partial loss of glycolytic capacity. Microbiology 151, 1657-1669.
    • (2005) Microbiology , vol.151 , pp. 1657-1669
    • Jansen, M.L.1    Diderich, J.A.2    Mashego, M.3    Hassane, A.4    de Winde, J.H.5    Daran-Lapujade, P.6    Pronk, J.T.7
  • 33
    • 0028363836 scopus 로고
    • The cold-shock response - a hot topic
    • Jones, P. G., and Inouye, M. (1994). The cold-shock response - a hot topic. Mol. Microbiol. 11, 811-818.
    • (1994) Mol. Microbiol , vol.11 , pp. 811-818
    • Jones, P.G.1    Inouye, M.2
  • 34
    • 0028953910 scopus 로고
    • Regulation of carbon metabolism in chemostat cultures of Saccharomyces cerevisiae grown on mixtures of glucose and ethanol
    • Jong-Gubbels, P., Vanrolleghem, P., Heijnen, S., van Dijken, J. P., and Pronk, J. T. (1995). Regulation of carbon metabolism in chemostat cultures of Saccharomyces cerevisiae grown on mixtures of glucose and ethanol. Yeast 11, 407-418.
    • (1995) Yeast , vol.11 , pp. 407-418
    • Jong-Gubbels, P.1    Vanrolleghem, P.2    Heijnen, S.3    van Dijken, J.P.4    Pronk, J.T.5
  • 35
    • 1842578963 scopus 로고    scopus 로고
    • Yeast adapt to near-freezing temperatures by STRE/Msn2,4- dependent induction of trehalose synthesis and certain molecular chaperones
    • Kandror, O., Bretschneider, N., Kreydin, E., Cavalieri, D., and Goldberg, A. L. (2004). Yeast adapt to near-freezing temperatures by STRE/Msn2,4- dependent induction of trehalose synthesis and certain molecular chaperones. Mol. Cell 13, 771-781.
    • (2004) Mol. Cell , vol.13 , pp. 771-781
    • Kandror, O.1    Bretschneider, N.2    Kreydin, E.3    Cavalieri, D.4    Goldberg, A.L.5
  • 37
    • 33745459776 scopus 로고    scopus 로고
    • Kolkman, A., Daran-Lapujade, P., Fullaondo, A., Olsthoorn, M. M., Pronk, J. T., Slijper, M., and Heck, A. J. (2006). Proteome analysis of yeast response to various nutrient limitations. Mol. Syst. Biol. 2, 2006.0026 (doi: 10.1038/msb4100069).
    • Kolkman, A., Daran-Lapujade, P., Fullaondo, A., Olsthoorn, M. M., Pronk, J. T., Slijper, M., and Heck, A. J. (2006). Proteome analysis of yeast response to various nutrient limitations. Mol. Syst. Biol. 2, 2006.0026 (doi: 10.1038/msb4100069).
  • 38
    • 0026000531 scopus 로고
    • TIP1, a cold shock-inducible gene of Saccharomyces cerevisiae
    • Kondo, K., and Inouye, M. (1991). TIP1, a cold shock-inducible gene of Saccharomyces cerevisiae. J. Biol. Chem. 266, 17537-17544.
    • (1991) J. Biol. Chem , vol.266 , pp. 17537-17544
    • Kondo, K.1    Inouye, M.2
  • 39
    • 0026731812 scopus 로고
    • Cold shock induction of yeast NSR1 protein and its role in pre-rRNA processing
    • Kondo, K., Kowalski, L. R., and Inouye, M. (1992). Cold shock induction of yeast NSR1 protein and its role in pre-rRNA processing. J. Biol. Chem. 267, 16259-16265.
    • (1992) J. Biol. Chem , vol.267 , pp. 16259-16265
    • Kondo, K.1    Kowalski, L.R.2    Inouye, M.3
  • 40
    • 0028931382 scopus 로고
    • Cold-shock induction of a family of TIP1-related proteins associated with the membrane in Saccharomyces cerevisiae
    • Kowalski, L. R., Kondo, K., and Inouye, M. (1995). Cold-shock induction of a family of TIP1-related proteins associated with the membrane in Saccharomyces cerevisiae. Mol. Microbiol. 15, 341-353.
    • (1995) Mol. Microbiol , vol.15 , pp. 341-353
    • Kowalski, L.R.1    Kondo, K.2    Inouye, M.3
  • 42
    • 12144288423 scopus 로고    scopus 로고
    • Kuyper, M., Harhangi, H. R., Stave, A. K., Winkler, A. A., Jetten, M. S., de Laat, W. T., den Ridder, J. J., Op den Camp, H. J., van Dijken, J. P., and Pronk, J. T. (2003). High-level functional expression of a fungal xylose isomerase: the key to efficient ethanolic fermentation of xylose by Saccharomyces cerevisiae? FEMS Yeast Res. 4, 69-78.
    • Kuyper, M., Harhangi, H. R., Stave, A. K., Winkler, A. A., Jetten, M. S., de Laat, W. T., den Ridder, J. J., Op den Camp, H. J., van Dijken, J. P., and Pronk, J. T. (2003). High-level functional expression of a fungal xylose isomerase: the key to efficient ethanolic fermentation of xylose by Saccharomyces cerevisiae? FEMS Yeast Res. 4, 69-78.
  • 43
    • 0026776083 scopus 로고
    • NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits
    • Lee, W. C., Zabetakis, D., and Melese, T. (1992). NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits. Mol. Cell. Biol. 12, 3865-3871.
    • (1992) Mol. Cell. Biol , vol.12 , pp. 3865-3871
    • Lee, W.C.1    Zabetakis, D.2    Melese, T.3
  • 44
    • 0027394884 scopus 로고
    • Role of growth phase and ethanol in freeze-thaw stress resistance of Saccharomyces cerevisiae
    • Lewis, J. G., Learmonth, R. P., and Watson, K. (1993). Role of growth phase and ethanol in freeze-thaw stress resistance of Saccharomyces cerevisiae. Appl. Environ. Microbiol. 59, 1065-1071.
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 1065-1071
    • Lewis, J.G.1    Learmonth, R.P.2    Watson, K.3
  • 45
    • 0036919883 scopus 로고    scopus 로고
    • Purification and characterization of fructose bisphosphate aldolase from the ground squirrel, Spermophilus lateralis: Enzyme role in mammalian hibernation
    • MacDonald, J. A., and Storey, K. B. (2002). Purification and characterization of fructose bisphosphate aldolase from the ground squirrel, Spermophilus lateralis: enzyme role in mammalian hibernation. Arch. Biochem. Biophys. 408, 279-285.
    • (2002) Arch. Biochem. Biophys , vol.408 , pp. 279-285
    • MacDonald, J.A.1    Storey, K.B.2
  • 46
    • 11444260525 scopus 로고    scopus 로고
    • Temperature and phosphate effects on allosteric phenomena of phosphofructokinase from a hibernating ground squirrel (Spermophilus lateralis)
    • MacDonald, J. A., and Storey, K. B. (2005). Temperature and phosphate effects on allosteric phenomena of phosphofructokinase from a hibernating ground squirrel (Spermophilus lateralis). FEBS J. 272, 120-128.
    • (2005) FEBS J , vol.272 , pp. 120-128
    • MacDonald, J.A.1    Storey, K.B.2
  • 47
    • 0034613279 scopus 로고    scopus 로고
    • Cloning and characterization of a Saccharomyces cerevisiae alkaline ceramidase with specificity for dihydroceramide
    • Mao, C., Xu, R., Bielawska, A., Szulc, Z. M., and Obeid, L. M. (2000). Cloning and characterization of a Saccharomyces cerevisiae alkaline ceramidase with specificity for dihydroceramide. J. Biol. Chem. 275, 31369-31378.
    • (2000) J. Biol. Chem , vol.275 , pp. 31369-31378
    • Mao, C.1    Xu, R.2    Bielawska, A.3    Szulc, Z.M.4    Obeid, L.M.5
  • 48
    • 0030791422 scopus 로고    scopus 로고
    • A family of ammonium transporters in Saccharomyces cerevisiae
    • Marini, A. M., Soussi-Boudekou, S., Vissers, S., and Andre, B. (1997). A family of ammonium transporters in Saccharomyces cerevisiae. Mol. Cell. Biol. 17, 4282-4293.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 4282-4293
    • Marini, A.M.1    Soussi-Boudekou, S.2    Vissers, S.3    Andre, B.4
  • 50
    • 11144273952 scopus 로고    scopus 로고
    • TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1
    • Martin, D. E., Soulard, A., and Hall, M. N. (2004). TOR regulates ribosomal protein gene expression via PKA and the Forkhead transcription factor FHL1. Cell 119, 969-979.
    • (2004) Cell , vol.119 , pp. 969-979
    • Martin, D.E.1    Soulard, A.2    Hall, M.N.3
  • 51
    • 0038034719 scopus 로고    scopus 로고
    • Critical evaluation of sampling techniques for residual glucose determination in carbon-limited chemostat culture of Saccharomyces cerevisiae
    • Mashego, M. R., Van Gulik, W. M., Vinke, J. L., and Heijnen, J. J. (2003). Critical evaluation of sampling techniques for residual glucose determination in carbon-limited chemostat culture of Saccharomyces cerevisiae. Biotechnol. Bioeng. 83, 395-399.
    • (2003) Biotechnol. Bioeng , vol.83 , pp. 395-399
    • Mashego, M.R.1    Van Gulik, W.M.2    Vinke, J.L.3    Heijnen, J.J.4
  • 52
    • 0001639179 scopus 로고
    • The growth of bacterial cultures
    • Monod, J. (1949). The growth of bacterial cultures. Annu. Rev. Microbiol. 3, 371-394.
    • (1949) Annu. Rev. Microbiol , vol.3 , pp. 371-394
    • Monod, J.1
  • 53
    • 33645967739 scopus 로고    scopus 로고
    • Genome-wide expression analysis of yeast response during exposure to 4 degrees C
    • Murata, Y. et al. (2006). Genome-wide expression analysis of yeast response during exposure to 4 degrees C. Extremophiles 10, 117-128.
    • (2006) Extremophiles , vol.10 , pp. 117-128
    • Murata, Y.1
  • 54
    • 0036295001 scopus 로고    scopus 로고
    • Mga2p is a putative sensor for low temperature and oxygen to induce OLE1 transcription in Saccharomyces cerevisiae
    • Nakagawa, Y., Sakumoto, N., Kaneko, Y., and Harashima, S. (2002). Mga2p is a putative sensor for low temperature and oxygen to induce OLE1 transcription in Saccharomyces cerevisiae. Biochem. Biophys. Res. Commun. 291, 707-713.
    • (2002) Biochem. Biophys. Res. Commun , vol.291 , pp. 707-713
    • Nakagawa, Y.1    Sakumoto, N.2    Kaneko, Y.3    Harashima, S.4
  • 55
    • 0001519096 scopus 로고
    • Experiments with the chemostat on spontaneous mutations of bacteria
    • Novick, A., and Szilard, L. (1950). Experiments with the chemostat on spontaneous mutations of bacteria. Proc. Natl. Acad. Sci. USA 36, 708-719.
    • (1950) Proc. Natl. Acad. Sci. USA , vol.36 , pp. 708-719
    • Novick, A.1    Szilard, L.2
  • 56
    • 33646192122 scopus 로고    scopus 로고
    • A downshift in temperature activates the high osmolarity glycerol (HOG) pathway, which determines freeze tolerance in Saccharomyces cerevisiae
    • Panadero, J., Pallotti, C., Rodriguez-Vargas, S., Randez-Gil, F., and Prieto, J. A. (2006). A downshift in temperature activates the high osmolarity glycerol (HOG) pathway, which determines freeze tolerance in Saccharomyces cerevisiae. J. Biol. Chem. 281, 4638-4645.
    • (2006) J. Biol. Chem , vol.281 , pp. 4638-4645
    • Panadero, J.1    Pallotti, C.2    Rodriguez-Vargas, S.3    Randez-Gil, F.4    Prieto, J.A.5
  • 57
    • 0031570353 scopus 로고    scopus 로고
    • A simplified procedure for a rapid and reliable assay of both glycogen and trehalose in whole yeast cells
    • Parrou, J. L., and Francois, J. (1997). A simplified procedure for a rapid and reliable assay of both glycogen and trehalose in whole yeast cells. Anal. Biochem. 248, 186-188.
    • (1997) Anal. Biochem , vol.248 , pp. 186-188
    • Parrou, J.L.1    Francois, J.2
  • 58
    • 0037020260 scopus 로고    scopus 로고
    • Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae
    • Piper, M. D., Daran-Lapujade, P., Bro, C., Regenberg, B., Knudsen, S., Nielsen, J., and Pronk, J. T. (2002). Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae. J. Biol. Chem. 277, 37001-37008.
    • (2002) J. Biol. Chem , vol.277 , pp. 37001-37008
    • Piper, M.D.1    Daran-Lapujade, P.2    Bro, C.3    Regenberg, B.4    Knudsen, S.5    Nielsen, J.6    Pronk, J.T.7
  • 60
    • 33845935641 scopus 로고    scopus 로고
    • Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae
    • doi: 10.1186/gb-2006-7-11-r107
    • Regenberg, B., Grotkjaer, T., Winther, O., Fausboll, A., Akesson, M., Bro, C., Hansen, L. K., Brunak, S. and Nielsen, J. (2006). Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae. Genome Biol. 7, R107 (doi: 10.1186/gb-2006-7-11-r107).
    • (2006) Genome Biol , vol.7
    • Regenberg, B.1    Grotkjaer, T.2    Winther, O.3    Fausboll, A.4    Akesson, M.5    Bro, C.6    Hansen, L.K.7    Brunak, S.8    Nielsen, J.9
  • 61
    • 0030891998 scopus 로고    scopus 로고
    • Kinetic characterization of individual hexose transporters of Saccharomyces cerevisiae and their relation to the triggering mechanisms of glucose repression
    • Reifenberger, E., Boles, E., and Ciriacy, M. (1997). Kinetic characterization of individual hexose transporters of Saccharomyces cerevisiae and their relation to the triggering mechanisms of glucose repression. Eur. J. Biochem. 245, 324-333.
    • (1997) Eur. J. Biochem , vol.245 , pp. 324-333
    • Reifenberger, E.1    Boles, E.2    Ciriacy, M.3
  • 62
    • 0036272099 scopus 로고    scopus 로고
    • Gene expression analysis of cold and freeze stress in Baker's yeast
    • Rodriguez-Vargas, S., Estruch, F., and Randez-Gil, F. (2002). Gene expression analysis of cold and freeze stress in Baker's yeast. Appl. Environ. Microbiol. 68, 3024-3030.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 3024-3030
    • Rodriguez-Vargas, S.1    Estruch, F.2    Randez-Gil, F.3
  • 63
    • 0029395010 scopus 로고
    • Stress signaling in yeast
    • Ruis, H., and Schuller, C. (1995). Stress signaling in yeast. Bioessays 17, 959-965.
    • (1995) Bioessays , vol.17 , pp. 959-965
    • Ruis, H.1    Schuller, C.2
  • 64
    • 0037147211 scopus 로고    scopus 로고
    • Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature
    • Sahara, T., Goda, T., and Ohgiya, S. (2002). Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature. J. Biol. Chem. 277, 50015-50021.
    • (2002) J. Biol. Chem , vol.277 , pp. 50015-50021
    • Sahara, T.1    Goda, T.2    Ohgiya, S.3
  • 65
    • 4344685444 scopus 로고    scopus 로고
    • Nutritional homeostasis in batch and steady-state culture of yeast
    • Saldanha, A. J., Brauer, M. J., and Botstein, D. (2004). Nutritional homeostasis in batch and steady-state culture of yeast. Mol. Biol. Cell 15, 4089-4104.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 4089-4104
    • Saldanha, A.J.1    Brauer, M.J.2    Botstein, D.3
  • 67
    • 0014468138 scopus 로고
    • Control of mixed-substrate utilization in continuous cultures of Escherichia coli
    • Silver, R. S., and Mateles, R. I. (1969). Control of mixed-substrate utilization in continuous cultures of Escherichia coli. J. Bacteriol. 97, 535-543.
    • (1969) J. Bacteriol , vol.97 , pp. 535-543
    • Silver, R.S.1    Mateles, R.I.2
  • 68
    • 0025242338 scopus 로고
    • The OLE1 gene of Saccharomyces cerevisiae encodes the delta 9 fatty acid desaturase and can be functionally replaced by the rat stearoyl-CoA desaturase gene
    • Stukey, J. E., McDonough, V. M., and Martin, C. E. (1990). The OLE1 gene of Saccharomyces cerevisiae encodes the delta 9 fatty acid desaturase and can be functionally replaced by the rat stearoyl-CoA desaturase gene. J. Biol. Chem. 265, 20144-20149.
    • (1990) J. Biol. Chem , vol.265 , pp. 20144-20149
    • Stukey, J.E.1    McDonough, V.M.2    Martin, C.E.3
  • 69
    • 12844281816 scopus 로고    scopus 로고
    • Two-dimensional transcriptome analysis in chemostat cultures: Combinatorial effects of oxygen availability and macronutrient limitation in Saccharomyces cerevisiae
    • Tai, S. L., Boer, V. M., Daran-Lapujade, P., Walsh, M. C., de Winde, J. H., Daran, J. M., and Pronk, J. T. (2005). Two-dimensional transcriptome analysis in chemostat cultures: combinatorial effects of oxygen availability and macronutrient limitation in Saccharomyces cerevisiae. J. Biol. Chem. 280, 437-447.
    • (2005) J. Biol. Chem , vol.280 , pp. 437-447
    • Tai, S.L.1    Boer, V.M.2    Daran-Lapujade, P.3    Walsh, M.C.4    de Winde, J.H.5    Daran, J.M.6    Pronk, J.T.7
  • 70
    • 34249851330 scopus 로고    scopus 로고
    • Control of the glycolytic flux in Saccharomyces cerevisiae grown at low temperature: A multi-level analysis in anaerobic chemostat cultures
    • Tai, S. L., Daran-Lapujade, P., Luttik, M. A., Walsh, M. C., Diderich, J. A., Krijger, G. C., Van Gulik, W. M., Pronk, J. T., and Daran, J. M. (2007). Control of the glycolytic flux in Saccharomyces cerevisiae grown at low temperature: a multi-level analysis in anaerobic chemostat cultures. J. Biol. Chem. 282, 10243-10251.
    • (2007) J. Biol. Chem , vol.282 , pp. 10243-10251
    • Tai, S.L.1    Daran-Lapujade, P.2    Luttik, M.A.3    Walsh, M.C.4    Diderich, J.A.5    Krijger, G.C.6    Van Gulik, W.M.7    Pronk, J.T.8    Daran, J.M.9
  • 72
    • 0142010078 scopus 로고    scopus 로고
    • Effects of fermentation temperature and Saccharomyces species on the cell fatty acid composition and presence of volatile compounds in wine
    • Torija, M. J., Beltran, G., Novo, M., Poblet, M., Guillamon, J. M., Mas, A., and Rozes, N. (2003). Effects of fermentation temperature and Saccharomyces species on the cell fatty acid composition and presence of volatile compounds in wine. Int. J. Food Microbiol. 85, 127-136.
    • (2003) Int. J. Food Microbiol , vol.85 , pp. 127-136
    • Torija, M.J.1    Beltran, G.2    Novo, M.3    Poblet, M.4    Guillamon, J.M.5    Mas, A.6    Rozes, N.7
  • 73
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher, V. G., Tibshirani, R., and Chu, G. (2001). Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA 98, 5116-5121.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 74
    • 0028797308 scopus 로고
    • Differential importance of trehalose in stress resistance in fermenting and nonfermenting Saccharomyces cerevisiae cells
    • Van Dijck, P., Colavizza, D., Smet, P., and Thevelein, J. M. (1995). Differential importance of trehalose in stress resistance in fermenting and nonfermenting Saccharomyces cerevisiae cells. Appl. Environ. Microbiol. 61, 109-115.
    • (1995) Appl. Environ. Microbiol , vol.61 , pp. 109-115
    • Van Dijck, P.1    Colavizza, D.2    Smet, P.3    Thevelein, J.M.4
  • 75
    • 0034731822 scopus 로고    scopus 로고
    • A web site for the computational analysis of yeast regulatory sequences
    • van Helden, J., Andre, B., and Collado-Vides, J. (2000). A web site for the computational analysis of yeast regulatory sequences. Yeast 16, 177-187.
    • (2000) Yeast , vol.16 , pp. 177-187
    • van Helden, J.1    Andre, B.2    Collado-Vides, J.3
  • 76
    • 0025318231 scopus 로고
    • Physiology of Saccharomyces cerevisiae in anaerobic glucose-limited chemostat cultures
    • Verduyn, C., Postma, E., Scheffers, W. A., and van Dijken, J. P. (1990). Physiology of Saccharomyces cerevisiae in anaerobic glucose-limited chemostat cultures. J. Gen. Microbiol. 136, 395-403.
    • (1990) J. Gen. Microbiol , vol.136 , pp. 395-403
    • Verduyn, C.1    Postma, E.2    Scheffers, W.A.3    van Dijken, J.P.4
  • 77
    • 0002596942 scopus 로고
    • Temperature relations
    • The Yeasts, ed. A. H. Rose and J. S. Harrison, London: Academic Press
    • Watson, K. (1987). Temperature relations. In: The Yeasts, ed. A. H. Rose and J. S. Harrison, Yeasts and the Environment, Vol. 2, London: Academic Press, 41-71.
    • (1987) Yeasts and the Environment , vol.2 , pp. 41-71
    • Watson, K.1
  • 79
    • 0027380639 scopus 로고
    • Multiple regions of NSR1 are sufficient for accumulation of a fusion protein within the nucleolus
    • Yan, C., and Melese, T. (1993). Multiple regions of NSR1 are sufficient for accumulation of a fusion protein within the nucleolus. J. Cell Biol. 123, 1081-1091.
    • (1993) J. Cell Biol , vol.123 , pp. 1081-1091
    • Yan, C.1    Melese, T.2


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