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Volumn 7, Issue , 2007, Pages

Evolution under strong balancing selection: How many codons determine specificity at the female self-incompatibility gene SRK in Brassicaceae?

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARABIDOPSIS; ARABIDOPSIS HALLERI; ARABIDOPSIS LYRATA; ARTICLE; BRASSICA; BRASSICACEAE; CODON; CONTROLLED STUDY; EUROPE; GENE; GENE FREQUENCY; GENE SEQUENCE; GENE SRK; GENETIC POLYMORPHISM; GENETIC SELECTION; MOLECULAR EVOLUTION; MOLECULAR INTERACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; SELF COMPATIBILITY; SIMULATION; ALLELE; CLASSIFICATION; GENETICS; HAPLOTYPE; PHYLOGENY;

EID: 35648958288     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-7-132     Document Type: Article
Times cited : (47)

References (59)
  • 1
    • 32544445408 scopus 로고    scopus 로고
    • Evolution of reproductive proteins from animals and plants
    • 10.1530/rep.1.00357. 16388004
    • Evolution of reproductive proteins from animals and plants. NL Clark JE Aagaard WJ Swanson, Reproduction 2006 131 11 22 10.1530/rep.1.00357 16388004
    • (2006) Reproduction , vol.131 , pp. 11-22
    • Clark, N.L.1    Aagaard, J.E.2    Swanson, W.J.3
  • 2
    • 0034103858 scopus 로고    scopus 로고
    • How can two-gene models of self-incompatibility generate new specificities?
    • 10715316. 10.1105/tpc.12.3.309
    • How can two-gene models of self-incompatibility generate new specificities? D Charlesworth, Plant Cell 2000 12 309 310 10715316 10.1105/tpc.12.3.309
    • (2000) Plant Cell , vol.12 , pp. 309-310
    • Charlesworth, D.1
  • 3
    • 0034103859 scopus 로고    scopus 로고
    • Evolutionary dynamics of dual-specificity self-incompatibility alleles
    • 10715317. 10.1105/tpc.12.3.310
    • Evolutionary dynamics of dual-specificity self-incompatibility alleles. MK Uyenoyama E Newbigin, Plant Cell 2000 12 310 311 10715317 10.1105/tpc.12.3.310
    • (2000) Plant Cell , vol.12 , pp. 310-311
    • Uyenoyama, M.K.1    Newbigin, E.2
  • 4
    • 0035053179 scopus 로고    scopus 로고
    • On the origin of self-incompatibility haplotypes: Transition through self-compatible intermediates
    • 11290732
    • On the origin of self-incompatibility haplotypes: Transition through self-compatible intermediates. MK Uyenoyama Y Zhang E Newbigin, Genetics 2001 157 1805 1817 11290732
    • (2001) Genetics , vol.157 , pp. 1805-1817
    • Uyenoyama, M.K.1    Zhang, Y.2    Newbigin, E.3
  • 5
    • 33645691679 scopus 로고    scopus 로고
    • Evolution of hormone-receptor complexity by molecular exploitation
    • 10.1126/science.1123348. 16601189
    • Evolution of hormone-receptor complexity by molecular exploitation. JT Bridgham SM Carroll JW Thornton, Science 2006 312 97 101 10.1126/science.1123348 16601189
    • (2006) Science , vol.312 , pp. 97-101
    • Bridgham, J.T.1    Carroll, S.M.2    Thornton, J.W.3
  • 7
    • 0035823245 scopus 로고    scopus 로고
    • Allele-specific receptor-ligand interactions in Brassica self-incompatibility
    • 10.1126/science.1062509. 11546871
    • Allele-specific receptor-ligand interactions in Brassica self-incompatibility. A Kachroo CR Schopfer ME Nasrallah JB Nasrallah, Science 2001 293 1824 1826 10.1126/science.1062509 11546871
    • (2001) Science , vol.293 , pp. 1824-1826
    • Kachroo, A.1    Schopfer, C.R.2    Nasrallah, M.E.3    Nasrallah, J.B.4
  • 9
    • 0742270978 scopus 로고    scopus 로고
    • Specificity determinants and diversification of the Brassica self-incompatibility pollen ligand
    • 14694189. 10.1073/pnas.2637116100
    • Specificity determinants and diversification of the Brassica self-incompatibility pollen ligand. T Chookajorn A Kachroo DR Ripoll AG Clark JB Nasrallah, Proc Nat Acad Sci USA 2003 101 911 917 14694189 10.1073/pnas. 2637116100
    • (2003) Proc Nat Acad Sci USA , vol.101 , pp. 911-917
    • Chookajorn, T.1    Kachroo, A.2    Ripoll, D.R.3    Clark, A.G.4    Nasrallah, J.B.5
  • 10
    • 21644442843 scopus 로고    scopus 로고
    • Diversification and alteration of recognition specificity of the pollen ligand SP11 /SCR in self-incompatibility of Brassica and Raphanus
    • 15548734. 10.1105/tpc.104.027029
    • Diversification and alteration of recognition specificity of the pollen ligand SP11 /SCR in self-incompatibility of Brassica and Raphanus. Y Sato S Okamoto T Nishio, The Plant Cell 2004 16 3230 3241 15548734 10.1105/tpc.104. 027029
    • (2004) The Plant Cell , vol.16 , pp. 3230-3241
    • Sato, Y.1    Okamoto, S.2    Nishio, T.3
  • 11
    • 0031432860 scopus 로고    scopus 로고
    • Hypervariable domains of self-incompatibility RNases mediate allele-specific pollen recognition
    • 12237346. 10.2307/3870522
    • Hypervariable domains of self-incompatibility RNases mediate allele-specific pollen recognition. DP Matton O Maes G Laublin Q Xike C Bertrand D Morse M Cappadocia, The Plant Cell 1997 9 1757 1766 12237346 10.2307/3870522
    • (1997) The Plant Cell , vol.9 , pp. 1757-1766
    • Matton, D.P.1    Maes, O.2    Laublin, G.3    Xike, Q.4    Bertrand, C.5    Morse, D.6    Cappadocia, M.7
  • 12
    • 0032029097 scopus 로고    scopus 로고
    • Are the hyper-variable regions of S RNases sufficient for allele-specific recognition of pollen?
    • 10.2307/3870590. 9546820
    • Are the hyper-variable regions of S RNases sufficient for allele-specific recognition of pollen? JA Verica AG McCubbin TH Kao, The Plant Cell 1998 10 314 316 10.2307/3870590 9546820
    • (1998) The Plant Cell , vol.10 , pp. 314-316
    • Verica, J.A.1    McCubbin, A.G.2    Kao, T.H.3
  • 13
    • 33645703019 scopus 로고    scopus 로고
    • Interspecific pairs of class II S haplotypes having different recognition specificities between Brassica oleracea and Brassica rapa
    • 10.1093/pcp/pci250. 16381659
    • Interspecific pairs of class II S haplotypes having different recognition specificities between Brassica oleracea and Brassica rapa. Y Sato K Sato T Nishio, Plant Cell Physiol 2006 47 340 345 10.1093/pcp/pci250 16381659
    • (2006) Plant Cell Physiol , vol.47 , pp. 340-345
    • Sato, Y.1    Sato, K.2    Nishio, T.3
  • 14
    • 36849146903 scopus 로고
    • Amino-acid sequence of glycoproteins encoded by three alleles of the S locus of Brassica oleracea
    • 10.1038/326617a0
    • Amino-acid sequence of glycoproteins encoded by three alleles of the S locus of Brassica oleracea. JB Nasrallah TH Kao CH Chen ML Goldberg ME Nasrallah, Nature 1987 326 617 619 10.1038/326617a0
    • (1987) Nature , vol.326 , pp. 617-619
    • Nasrallah, J.B.1    Kao, T.H.2    Chen, C.H.3    Goldberg, M.L.4    Nasrallah, M.E.5
  • 15
    • 0030844297 scopus 로고    scopus 로고
    • Striking sequence similarity in inter- and intra-specific comparisons of class I SLG alleles from Brassica oleracea and Brassica campestris: Implications for the evolution and recognition mechanism
    • 9207151. 10.1073/pnas.94.14.7673
    • Striking sequence similarity in inter- and intra-specific comparisons of class I SLG alleles from Brassica oleracea and Brassica campestris: implications for the evolution and recognition mechanism. M Kusaba T Nishio Y Satta K Hinata D Ockendon, Proc Nat Acad Sci USA 1997 94 7673 7678 9207151 10.1073/pnas.94.14.7673
    • (1997) Proc Nat Acad Sci USA , vol.94 , pp. 7673-7678
    • Kusaba, M.1    Nishio, T.2    Satta, Y.3    Hinata, K.4    Ockendon, D.5
  • 17
    • 2542441987 scopus 로고    scopus 로고
    • Distribution of similar self-incompatibility (S) haplotypes in different genera, Raphanus and Brassica
    • 10.1007/s00497-004-0211-2
    • Distribution of similar self-incompatibility (S) haplotypes in different genera, Raphanus and Brassica. S Okamoto Y Sato K Sakamoto T Nishio, Sex Plant Reprod 2004 17 33 39 10.1007/s00497-004-0211-2
    • (2004) Sex Plant Reprod , vol.17 , pp. 33-39
    • Okamoto, S.1    Sato, Y.2    Sakamoto, K.3    Nishio, T.4
  • 18
    • 0035024080 scopus 로고    scopus 로고
    • Identification and characterization of a polymorphic receptor kinase gene linked to the self-incompatibility locus of Arabidopsis lyrata
    • 11333247
    • Identification and characterization of a polymorphic receptor kinase gene linked to the self-incompatibility locus of Arabidopsis lyrata. MH Schierup BK Mable P Awadalla D Charlesworth, Genetics 2001 158 387 399 11333247
    • (2001) Genetics , vol.158 , pp. 387-399
    • Schierup, M.H.1    Mable, B.K.2    Awadalla, P.3    Charlesworth, D.4
  • 19
    • 0033958474 scopus 로고    scopus 로고
    • Sequence and structural diversity of the S locus genes from different lines with the same self-recognition specificities in Brassica oleracea
    • 10628999
    • Sequence and structural diversity of the S locus genes from different lines with the same self-recognition specificities in Brassica oleracea. M Kusaba M Matsushita K Okazaki Y Satta T Nishio, Genetics 2000 154 413 420 10628999
    • (2000) Genetics , vol.154 , pp. 413-420
    • Kusaba, M.1    Matsushita, M.2    Okazaki, K.3    Satta, Y.4    Nishio, T.5
  • 21
    • 0033058237 scopus 로고    scopus 로고
    • Comparative analysis of S haplotypes with very similar SLG alleles in Brassica rapa and B. oleracea
    • 10.1046/j.1365-313X.1999.00355.x. 10069069
    • Comparative analysis of S haplotypes with very similar SLG alleles in Brassica rapa and B. oleracea. M Kusaba T Nishio, Plant J 1999 17 83 92 10.1046/j.1365-313X.1999.00355.x 10069069
    • (1999) Plant J , vol.17 , pp. 83-92
    • Kusaba, M.1    Nishio, T.2
  • 22
    • 33748173668 scopus 로고    scopus 로고
    • The transition to self-compatibility in Arabidopsis thaliana and evolution within S-haplotypes over 10 Myr
    • 10.1093/molbev/msl042. 16782760
    • The transition to self-compatibility in Arabidopsis thaliana and evolution within S-haplotypes over 10 Myr. JS Bechsgaard V Castric D Charlesworth X Vekemans MH Schierup, Mol Biol Evol 2006 23 1741 1750 10.1093/molbev/msl042 16782760
    • (2006) Mol Biol Evol , vol.23 , pp. 1741-1750
    • Bechsgaard, J.S.1    Castric, V.2    Charlesworth, D.3    Vekemans, X.4    Schierup, M.H.5
  • 23
    • 14544281087 scopus 로고    scopus 로고
    • Positive selection of primate TRIM5α identifies a criticalspecies-specific retroviral restriction domain
    • 15689398. 10.1073/pnas.0409853102
    • Positive selection of primate TRIM5α identifies a criticalspecies-specific retroviral restriction domain. SL Sawyer LI Wu M Emerman HS Malik, Proc Nat Acad Sci USA 2005 102 2832 2837 15689398 10.1073/pnas.0409853102
    • (2005) Proc Nat Acad Sci USA , vol.102 , pp. 2832-2837
    • Sawyer, S.L.1    Wu, L.I.2    Emerman, M.3    Malik, H.S.4
  • 24
    • 0001389016 scopus 로고
    • The distribution of self-sterility alleles in populations
    • 17246937
    • The distribution of self-sterility alleles in populations. S Wright, Genetics 1939 24 538 552 17246937
    • (1939) Genetics , vol.24 , pp. 538-552
    • Wright, S.1
  • 25
    • 0242666324 scopus 로고    scopus 로고
    • Patterns of variation within self-incompatibility loci
    • 10.1093/molbev/msg209. 12885955
    • Patterns of variation within self-incompatibility loci. N Takebayashi PB Brewer E Newbigin MK Uyenoyama, Mol Biol Evol 2003 20 1778 1794 10.1093/molbev/msg209 12885955
    • (2003) Mol Biol Evol , vol.20 , pp. 1778-1794
    • Takebayashi, N.1    Brewer, P.B.2    Newbigin, E.3    Uyenoyama, M.K.4
  • 26
    • 18844420035 scopus 로고    scopus 로고
    • Detecting site-specific physicochemical selective pressures: Applications to the class-I HLA of the human major histocompatibility complex and the SRK of the plant sporophytic self-incompatibility system
    • 10.1007/s00239-004-0153-1. 15871042
    • Detecting site-specific physicochemical selective pressures: applications to the class-I HLA of the human major histocompatibility complex and the SRK of the plant sporophytic self-incompatibility system. R Sainudiin WSW Wong K Yogeeswaran JB Nasrallah Z Yang R Nielsen, J Mol Evol 2005 60 315 326 10.1007/s00239-004-0153-1 15871042
    • (2005) J Mol Evol , vol.60 , pp. 315-326
    • Sainudiin, R.1    Wong, W.S.W.2    Yogeeswaran, K.3    Nasrallah, J.B.4    Yang, Z.5    Nielsen, R.6
  • 27
    • 0036272936 scopus 로고    scopus 로고
    • Accuracy and power of Bayes prediction of amino acid sites under positive selection
    • 12032251
    • Accuracy and power of Bayes prediction of amino acid sites under positive selection. M Anisimova JP Bielawski Z Yang, Mol Biol Evol 2002 19 950 958 12032251
    • (2002) Mol Biol Evol , vol.19 , pp. 950-958
    • Anisimova, M.1    Bielawski, J.P.2    Yang, Z.3
  • 28
    • 0041316996 scopus 로고    scopus 로고
    • Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata
    • 12930757
    • Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata. D Charlesworth BK Mable MH Schierup C Bartolomé P Awadalla, Genetics 2003 164 1519 1535 12930757
    • (2003) Genetics , vol.164 , pp. 1519-1535
    • Charlesworth, D.1    Mable, B.K.2    Schierup, M.H.3    Bartolomé, C.4    Awadalla, P.5
  • 29
    • 2342597892 scopus 로고    scopus 로고
    • Uneven segregation of sporophytic self-incompatibility alleles in Arabidopsis lyrata
    • 10.1111/j.1420-9101.2004.00699.x. 15149398
    • Uneven segregation of sporophytic self-incompatibility alleles in Arabidopsis lyrata. J Bechsgaard T Bataillon MH Schierup, J Evol Biol 2004 17 554 561 10.1111/j.1420-9101.2004.00699.x 15149398
    • (2004) J Evol Biol , vol.17 , pp. 554-561
    • Bechsgaard, J.1    Bataillon, T.2    Schierup, M.H.3
  • 30
    • 0033818179 scopus 로고    scopus 로고
    • Sequence diversity of SLG and SRK in Brassica oleracea L
    • 10.1006/anbo.1999.1041
    • Sequence diversity of SLG and SRK in Brassica oleracea L. T Nishio M Kusaba, Annals of Botany 2000 85 141 146 10.1006/anbo.1999.1041
    • (2000) Annals of Botany , vol.85 , pp. 141-146
    • Nishio, T.1    Kusaba, M.2
  • 31
    • 34548557170 scopus 로고    scopus 로고
    • The genetic basis of zinc tolerance in the metallophyte Arabidopsis halleri ssp. halleri (Brassicaceae): An analysis of quantitative trait loci
    • 17409091
    • The genetic basis of zinc tolerance in the metallophyte Arabidopsis halleri ssp. halleri (Brassicaceae): an analysis of quantitative trait loci. G Willems C Godé DB Dräger M Courbot N Verbruggen P Saumitou-Laprade, Genetics 2007 17409091
    • (2007) Genetics
    • Willems, G.1    Godé, C.2    Dräger, D.B.3    Courbot, M.4    Verbruggen, N.5    Saumitou-Laprade, P.6
  • 32
    • 0035056575 scopus 로고    scopus 로고
    • Self-incompatibility in the genus Arabidopsis : cccharacterization of the S-locus in the outcrossing a lyrata and its autogamous relative a thaliana
    • 11251101. 10.2307/3871411
    • Self-incompatibility in the genus Arabidopsis : characterization of the S-locus in the outcrossing A lyrata and its autogamous relative A thaliana. M Kusaba K Dwyer J Hendershot J Vrebalov JB Nasrallah ME Nasrallah, The Plant Cell 2001 13 627 643 11251101 10.2307/3871411
    • (2001) The Plant Cell , vol.13 , pp. 627-643
    • Kusaba, M.1    Dwyer, K.2    Hendershot, J.3    Vrebalov, J.4    Nasrallah, J.B.5    Nasrallah, M.E.6
  • 33
    • 20444372250 scopus 로고    scopus 로고
    • Phenotypic and genotypic expression of self-incompatibility haplotypes in Arabidopsis lyrata suggests unique origin of alleles in different dominance classes
    • 10.1093/molbev/msi153. 15858208
    • Phenotypic and genotypic expression of self-incompatibility haplotypes in Arabidopsis lyrata suggests unique origin of alleles in different dominance classes. NL Prigoda A Nassuth BK Mable, Mol Biol Evol 2005 22 1609 1620 10.1093/molbev/msi153 15858208
    • (2005) Mol Biol Evol , vol.22 , pp. 1609-1620
    • Prigoda, N.L.1    Nassuth, A.2    Mable, B.K.3
  • 34
    • 0025366147 scopus 로고
    • A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism
    • 2320564. 10.1073/pnas.87.7.2419
    • A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism. N Takahata, Proc Nat Acad Sci USA 1990 87 2419 2423 2320564 10.1073/pnas.87.7.2419
    • (1990) Proc Nat Acad Sci USA , vol.87 , pp. 2419-2423
    • Takahata, N.1
  • 35
    • 0242666380 scopus 로고    scopus 로고
    • Haplotype structure of the stigmatic self-incompatibility gene in natural populations of Arabidopsis lyrata
    • 10.1093/molbev/msg170. 12832651
    • Haplotype structure of the stigmatic self-incompatibility gene in natural populations of Arabidopsis lyrata. D Charlesworth C Bartolome MH Schierup BK Mable, Mol Biol Evol 2003 20 1741 1753 10.1093/molbev/msg170 12832651
    • (2003) Mol Biol Evol , vol.20 , pp. 1741-1753
    • Charlesworth, D.1    Bartolome, C.2    Schierup, M.H.3    Mable, B.K.4
  • 36
    • 1642274061 scopus 로고    scopus 로고
    • Multilocus analysis of variation and speciation in the closely related species Arabidopsis halleri and a lyrata
    • 15020431. 10.1534/genetics.166.1.373
    • Multilocus analysis of variation and speciation in the closely related species Arabidopsis halleri and A lyrata. SE Ramos-Onsins BE Stranger T Mitchell-Olds M Aguadé Genetics 2004 166 373 388 15020431 10.1534/genetics.166.1.373
    • (2004) Genetics , vol.166 , pp. 373-388
    • Ramos-Onsins, S.E.1    Stranger, B.E.2    Mitchell-Olds, T.3    Aguadé, M.4
  • 37
    • 33750012104 scopus 로고    scopus 로고
    • Variability patterns and positively selected sites at the gametophytic self-incompatibility pollen SFB gene in a wild self-incompatible Prunus spinosa (Rosaceae) population
    • 10.1111/j.1469-8137.2006.01838.x. 17083687
    • Variability patterns and positively selected sites at the gametophytic self-incompatibility pollen SFB gene in a wild self-incompatible Prunus spinosa (Rosaceae) population. MDS Nunes RAM Santos SM Ferreira J Vieira CP Vieira, New Phytologist 2006 172 577 587 10.1111/j.1469-8137.2006.01838.x 17083687
    • (2006) New Phytologist , vol.172 , pp. 577-587
    • Nunes, M.D.S.1    Santos, R.A.M.2    Ferreira, S.M.3    Vieira, J.4    Vieira, C.P.5
  • 38
    • 33745822098 scopus 로고    scopus 로고
    • Gametophytic self-incompatibility in Lycium parishii (Solanaceae): Allelic diversity, genealogical structure, and patterns of molecular evolution at the S-RNase locus
    • 10.1038/sj.hdy.6800818. 16622475
    • Gametophytic self-incompatibility in Lycium parishii (Solanaceae): allelic diversity, genealogical structure, and patterns of molecular evolution at the S-RNase locus. AE Savage JS Miller, Heredity 2006 96 434 444 10.1038/sj.hdy.6800818 16622475
    • (2006) Heredity , vol.96 , pp. 434-444
    • Savage, A.E.1    Miller, J.S.2
  • 39
    • 0001997846 scopus 로고
    • Evolutionary inferences from molecular characterization of self-incompatiblity alleles
    • Sunderland, MA: Sinauer Associates Takahata N, Clark AG
    • Evolutionary inferences from molecular characterization of self-incompatiblity alleles. AG Clark, Mechanisms of molecular evolution Sunderland, MA: Sinauer Associates, Takahata N, Clark AG, 1993 79 108
    • (1993) Mechanisms of Molecular Evolution , pp. 79-108
    • Clark, A.G.1
  • 40
    • 0042208362 scopus 로고    scopus 로고
    • Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites
    • 12871927
    • Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites. M Anisimova R Nielsen Z Yang, Genetics 2003 164 1229 1236 12871927
    • (2003) Genetics , vol.164 , pp. 1229-1236
    • Anisimova, M.1    Nielsen, R.2    Yang, Z.3
  • 41
    • 33645229840 scopus 로고    scopus 로고
    • Estimating diversifying selection and functional constraint in the presence of recombination
    • 16387887. 10.1534/genetics.105.044917
    • Estimating diversifying selection and functional constraint in the presence of recombination. DJ Wilson G McVean, Genetics 2006 172 1411 1425 16387887 10.1534/genetics.105.044917
    • (2006) Genetics , vol.172 , pp. 1411-1425
    • Wilson, D.J.1    McVean, G.2
  • 42
    • 33746407614 scopus 로고    scopus 로고
    • Comparative gene mapping in Arabidopsis lyrata chromosomes 6 and 7 and a thaliana chromosome IV : eeevolutionary history, rearrangements and local recombination rates
    • Comparative gene mapping in Arabidopsis lyrata chromosomes 6 and 7 and A thaliana chromosome IV : evolutionary history, rearrangements and local recombination rates. A Kawabe B Hansson A Forrest J Hagenblad D Charlesworth, Genet Res Camb 2006 88 1 45 56
    • (2006) Genet Res Camb , vol.88 , Issue.1 , pp. 45-56
    • Kawabe, A.1    Hansson, B.2    Forrest, A.3    Hagenblad, J.4    Charlesworth, D.5
  • 43
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • 10.1093/bib/5.2.150. 15260895
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. S Kumar K Tamura M Nei, Briefings in Bioinformatics 2004 5 150 163 10.1093/bib/5.2.150 15260895
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 44
    • 0033823102 scopus 로고    scopus 로고
    • Population-level studies of multiallelic self-incompatibility loci, with particular reference to Brassicaceae
    • 10.1006/anbo.1999.1015
    • Population-level studies of multiallelic self-incompatibility loci, with particular reference to Brassicaceae. D Charlesworth P Awadalla BK Mable MH Schierup, Annals of Botany 2000 85 227 239 10.1006/anbo.1999.1015
    • (2000) Annals of Botany , vol.85 , pp. 227-239
    • Charlesworth, D.1    Awadalla, P.2    Mable, B.K.3    Schierup, M.H.4
  • 45
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • 10.1093/nar/25.24.4876
    • The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins, Nucleic Acids Research 1997 24 4876 4882 10.1093/nar/25.24.4876
    • (1997) Nucleic Acids Research , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 46
    • 0026046099 scopus 로고
    • Molecular cloning of a putative receptor protein kinase gene encoded at the self-incompatibility locus of Brassica oleracea
    • 1681543. 10.1073/pnas.88.19.8816
    • Molecular cloning of a putative receptor protein kinase gene encoded at the self-incompatibility locus of Brassica oleracea. JC Stein B Howlett DC Boyes ME Nasrallah JB Nasrallah, Proc Nat Acad Sci USA 1991 88 8816 8820 1681543 10.1073/pnas.88.19.8816
    • (1991) Proc Nat Acad Sci USA , vol.88 , pp. 8816-8820
    • Stein, J.C.1    Howlett, B.2    Boyes, D.C.3    Nasrallah, M.E.4    Nasrallah, J.B.5
  • 47
    • 0028425890 scopus 로고
    • The sequences of S-glycoproteins involved in self-incompatibility of Brassica campestris and their distribution among Brassicaceae
    • 7764979
    • The sequences of S-glycoproteins involved in self-incompatibility of Brassica campestris and their distribution among Brassicaceae. S Yamakawa H Shiba M Watanabe H Shiozawa S Takayama K Hinata A Isogai A Suzuki, Biosci Biotechnol Biochem 1994 58 921 925 7764979
    • (1994) Biosci Biotechnol Biochem , vol.58 , pp. 921-925
    • Yamakawa, S.1    Shiba, H.2    Watanabe, M.3    Shiozawa, H.4    Takayama, S.5    Hinata, K.6    Isogai, A.7    Suzuki, A.8
  • 48
    • 9744280420 scopus 로고    scopus 로고
    • Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin
    • 10.1093/glycob/cwh106. 15175256
    • Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin. M Zhang B Gaschen W Blay B Foley N Haigwood C Kuiken B Korber, Glycobiology 2004 14 1229 1246 10.1093/glycob/cwh106 15175256
    • (2004) Glycobiology , vol.14 , pp. 1229-1246
    • Zhang, M.1    Gaschen, B.2    Blay, W.3    Foley, B.4    Haigwood, N.5    Kuiken, C.6    Korber, B.7
  • 49
    • 35648968864 scopus 로고    scopus 로고
    • http://hiv-web.lanl.gov/content/hiv-db/GLYCOSITE/glycosite.html
  • 50
    • 35648951920 scopus 로고    scopus 로고
    • http://www.stats.ox.ac.uk/∼mcvean/LDhat/
  • 51
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • PAML: a program package for phylogenetic analysis by maximum likelihood. Z Yang, Computer Applications in BioSciences 1997 13 5 555 556
    • (1997) Computer Applications in BioSciences , vol.13 , Issue.5 , pp. 555-556
    • Yang, Z.1
  • 52
    • 0003437302 scopus 로고    scopus 로고
    • PHYLIP (Phylogeny Inference Package) version 3.6
    • Department of Genome Sciences, University of Washington, Seattle
    • PHYLIP (Phylogeny Inference Package) version 3.6. J Felsenstein, Distributed by the author Department of Genome Sciences, University of Washington, Seattle 2005
    • (2005) Distributed by the Author
    • Felsenstein, J.1
  • 53
    • 0031972161 scopus 로고    scopus 로고
    • Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
    • 9539414
    • Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene. R Nielsen Z Yang, Genetics 1998 148 929 936 9539414
    • (1998) Genetics , vol.148 , pp. 929-936
    • Nielsen, R.1    Yang, Z.2
  • 54
    • 8544225780 scopus 로고    scopus 로고
    • Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites
    • 15514074. 10.1534/genetics.104.031153
    • Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites. WSW Wong Z Yang N Goldman R Nielsen, Genetics 2004 168 1041 1051 15514074 10.1534/genetics.104.031153
    • (2004) Genetics , vol.168 , pp. 1041-1051
    • Wong, W.S.W.1    Yang, Z.2    Goldman, N.3    Nielsen, R.4
  • 55
    • 16344378246 scopus 로고    scopus 로고
    • Bayes empirical bayes inference of amino acid sites under positive selection
    • 10.1093/molbev/msi097. 15689528
    • Bayes empirical bayes inference of amino acid sites under positive selection. Z Yang WSW Wong R Nielsen, Mol Biol Evol 2005 22 1107 1118 10.1093/molbev/msi097 15689528
    • (2005) Mol Biol Evol , vol.22 , pp. 1107-1118
    • Yang, Z.1    Wong, W.S.W.2    Nielsen, R.3
  • 56
    • 15844406550 scopus 로고    scopus 로고
    • HyPhy: Hypothesis testing using phylogenies
    • 10.1093/bioinformatics/bti079. 15509596
    • HyPhy: hypothesis testing using phylogenies. SL Kosakovsky Pond SDW Frost SV Muse, Bioinformatics 2005 21 676 679 10.1093/bioinformatics/bti079 15509596
    • (2005) Bioinformatics , vol.21 , pp. 676-679
    • Kosakovsky Pond, S.L.1    Frost, S.D.W.2    Muse, S.V.3
  • 57
    • 0036134765 scopus 로고    scopus 로고
    • Codon-substitution models to detect adaptive evolution that account for heterogeneous selective pressures among site classes
    • 11752189
    • Codon-substitution models to detect adaptive evolution that account for heterogeneous selective pressures among site classes. Z Yang WJ Swanson, Mol Biol Evol 2002 19 49 57 11752189
    • (2002) Mol Biol Evol , vol.19 , pp. 49-57
    • Yang, Z.1    Swanson, W.J.2
  • 58
    • 27844569825 scopus 로고    scopus 로고
    • Site-to-site variation of synonymous substitution rates
    • 10.1093/molbev/msi232. 16107593
    • Site-to-site variation of synonymous substitution rates. SL Kosakovsky Pond SV Muse, Mol Biol Evol 2005 22 2375 2385 10.1093/molbev/msi232 16107593
    • (2005) Mol Biol Evol , vol.22 , pp. 2375-2385
    • Kosakovsky Pond, S.L.1    Muse, S.V.2
  • 59
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • 10.1093/bioinformatics/btg180. 12912839
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 1574 10.1093/bioinformatics/btg180 12912839
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2


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