메뉴 건너뛰기




Volumn 88, Issue 1, 2006, Pages 45-56

Comparative gene mapping in Arabidopsis lyrata chromosomes 6 and 7 and A. thaliana chromosome IV: Evolutionary history, rearrangements and local recombination rates

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS LYRATA; ARTICLE; CENTROMERE; CHROMOSOME 4; CHROMOSOME 6; CHROMOSOME 7; CHROMOSOME REARRANGEMENT; COMPARATIVE GENE MAPPING; CONTROLLED STUDY; GENE TRANSLOCATION; GENETIC INCOMPATIBILITY; GENETIC RECOMBINATION; GENOME; MARKER GENE; NONHUMAN; PLANT CHROMOSOME; PREDICTION; SPECIES DIFFERENTIATION;

EID: 33746407614     PISSN: 00166723     EISSN: 14695073     Source Type: Journal    
DOI: 10.1017/S0016672306008287     Document Type: Article
Times cited : (26)

References (45)
  • 2
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative (2000). Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 3
    • 2342597892 scopus 로고    scopus 로고
    • Uneven segregation of sporophytic self-incompatibility alleles in Arabidopsis lyrata
    • Bechsgaard, J., Bataillon, T. & Schierup, M. H. (2004). Uneven segregation of sporophytic self-incompatibility alleles in Arabidopsis lyrata. Journal of Evolutionary Biology 17, 554-561.
    • (2004) Journal of Evolutionary Biology , vol.17 , pp. 554-561
    • Bechsgaard, J.1    Bataillon, T.2    Schierup, M.H.3
  • 4
    • 3042586217 scopus 로고    scopus 로고
    • The Arabidopsis genome sequence as a tool for genome analysis in Brassicaceae: A comparison of the Arabidopsis and Capsella rubella genomes
    • Boivin, K., Acarkan, A., Mbulu, R.-S., Clarenz, O. & Schmidt, R. (2004). The Arabidopsis genome sequence as a tool for genome analysis in Brassicaceae: A comparison of the Arabidopsis and Capsella rubella genomes. Plant Physiology 134, 735-744.
    • (2004) Plant Physiology , vol.134 , pp. 735-744
    • Boivin, K.1    Acarkan, A.2    Mbulu, R.-S.3    Clarenz, O.4    Schmidt, R.5
  • 7
    • 11944273191 scopus 로고
    • Genetic loads and estimates of mutation rates in very inbred plant populations
    • Charlesworth, B., Charlesworth, D. & Morgan, M. T. (1990). Genetic loads and estimates of mutation rates in very inbred plant populations. Nature 347, 380-382.
    • (1990) Nature , vol.347 , pp. 380-382
    • Charlesworth, B.1    Charlesworth, D.2    Morgan, M.T.3
  • 8
    • 0017376244 scopus 로고
    • Effects of selfing on selection for recombination
    • Charlesworth, D., Charlesworth, B. & Strobeck, C. (1977). Effects of selfing on selection for recombination. Genetics 68, 213-226.
    • (1977) Genetics , vol.68 , pp. 213-226
    • Charlesworth, D.1    Charlesworth, B.2    Strobeck, C.3
  • 9
    • 0013519271 scopus 로고
    • Selection for recombination in self-fertilising species
    • Charlesworth, D., Charlesworth, B. & Strobeck, C. (1979). Selection for recombination in self-fertilising species. Genetics 93, 237-244.
    • (1979) Genetics , vol.93 , pp. 237-244
    • Charlesworth, D.1    Charlesworth, B.2    Strobeck, C.3
  • 10
    • 33646719967 scopus 로고    scopus 로고
    • Measuring genome-wide recombination and centromere functions in Arabidopsis meiosis
    • Copenhaver, G. P., Browne, W. E. & Preuss, D. (1997). Measuring genome-wide recombination and centromere functions in Arabidopsis meiosis. Molecular Biology of the Cell 8, 1557.
    • (1997) Molecular Biology of the Cell , vol.8 , pp. 1557
    • Copenhaver, G.P.1    Browne, W.E.2    Preuss, D.3
  • 12
    • 2642710921 scopus 로고    scopus 로고
    • Recombination occurs uniformly in the bronze gene, a recombination hotspot in the maize genome
    • Dooner, H. K. & Martinez-Férez, I. M. (1997). Recombination occurs uniformly in the bronze gene, a recombination hotspot in the maize genome. The Plant Cell 9, 1633-1646.
    • (1997) The Plant Cell , vol.9 , pp. 1633-1646
    • Dooner, H.K.1    Martinez-Férez, I.M.2
  • 14
    • 1942508888 scopus 로고    scopus 로고
    • Molecular evolution of the S locus controlling mating in the Brassicaceae
    • Fobis-Loisy, I., Miege, C. & Gaude, T. (2004). Molecular evolution of the S locus controlling mating in the Brassicaceae. Plant Biology 6, 109-118.
    • (2004) Plant Biology , vol.6 , pp. 109-118
    • Fobis-Loisy, I.1    Miege, C.2    Gaude, T.3
  • 16
    • 0034603206 scopus 로고    scopus 로고
    • Integrated cytogenetic map of chromosome arm 4S of A. thaliana L.: Structural organization of heterochromatic knob and centromere region
    • Fransz, P. F., Armstrong, S. J., Jong, H., de, Parnell, L. D., Drunen, C. van, Dean, C., Zabel, P., Bisseling, T. & Jones, G. H. (2000). Integrated cytogenetic map of chromosome arm 4S of A. thaliana L.: structural organization of heterochromatic knob and centromere region. Cell 100, 367-376.
    • (2000) Cell , vol.100 , pp. 367-376
    • Fransz, P.F.1    Armstrong, S.J.2    Jong, H.3    de Parnell, L.D.4    Drunen, C.5    van Dean, C.6    Zabel, P.7    Bisseling, T.8    Jones, G.H.9
  • 17
    • 0036263045 scopus 로고    scopus 로고
    • Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana
    • Hagenblad, J. & Nordborg, M. (2002). Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana. Genetics 161, 289-298.
    • (2002) Genetics , vol.161 , pp. 289-298
    • Hagenblad, J.1    Nordborg, M.2
  • 18
    • 33644638092 scopus 로고    scopus 로고
    • Dynamic evolution at pericentromeres
    • Hall, A. E., Kettler, G. C. & Preuss, D. (2006). Dynamic evolution at pericentromeres. Genome Research 16, 355-364.
    • (2006) Genome Research , vol.16 , pp. 355-364
    • Hall, A.E.1    Kettler, G.C.2    Preuss, D.3
  • 19
    • 27244436959 scopus 로고    scopus 로고
    • A simple method to score single nucleotide polymorphisms based on allele-specific PCR and primer-induced fragment-length variation
    • Hansson, B. & Kawabe, A. (2005). A simple method to score single nucleotide polymorphisms based on allele-specific PCR and primer-induced fragment-length variation. Molecular Ecology Notes 5, 692-696.
    • (2005) Molecular Ecology Notes , vol.5 , pp. 692-696
    • Hansson, B.1    Kawabe, A.2
  • 20
    • 33646750303 scopus 로고    scopus 로고
    • Comparative gene mapping in Arabidopsis lyrata chromosomes 1 and 2 and the corresponding A. thaliana chromosome 1: Recombination rates, rearrangements and centromere location
    • in press
    • Hansson, B., Kawabe, A., Preuss, S., Kuittinen, H. & Charlesworth, D. (2006). Comparative gene mapping in Arabidopsis lyrata chromosomes 1 and 2 and the corresponding A. thaliana chromosome 1: Recombination rates, rearrangements and centromere location. Genetical Research in press.
    • (2006) Genetical Research
    • Hansson, B.1    Kawabe, A.2    Preuss, S.3    Kuittinen, H.4    Charlesworth, D.5
  • 22
    • 26244445553 scopus 로고    scopus 로고
    • Balancing selection and low recombination affect diversity near the self-Incompatibility loci of the plant Arabidopsis lyrata
    • Kamau, E. & Charlesworth, D. (2005). Balancing selection and low recombination affect diversity near the self-Incompatibility loci of the plant Arabidopsis lyrata. Current Biology 15, 1773-1778.
    • (2005) Current Biology , vol.15 , pp. 1773-1778
    • Kamau, E.1    Charlesworth, D.2
  • 23
    • 33746388441 scopus 로고    scopus 로고
    • Centromere locations and associated chromosome rearrangements in A. lyrata and A. thaliana
    • in press
    • Kawabe, A., Hansson, B., Hagenblad, J., Forrest, A. & Charlesworth, D. (2006). Centromere locations and associated chromosome rearrangements in A. lyrata and A. thaliana. Genetics in press.
    • (2006) Genetics
    • Kawabe, A.1    Hansson, B.2    Hagenblad, J.3    Forrest, A.4    Charlesworth, D.5
  • 24
    • 16244366488 scopus 로고    scopus 로고
    • Genome evolution among cruciferous plants: A lecture from the comparison of the genetic map of three diploid species - Capsella rubella, Arabidopsis lyrata subsp. petraea, and A. thaliana
    • Koch, M. & Kiefer, M. (2005). Genome evolution among cruciferous plants: a lecture from the comparison of the genetic map of three diploid species - Capsella rubella, Arabidopsis lyrata subsp. petraea, and A. thaliana. American Journal of Botany 92, 761-767.
    • (2005) American Journal of Botany , vol.92 , pp. 761-767
    • Koch, M.1    Kiefer, M.2
  • 26
    • 0030948243 scopus 로고    scopus 로고
    • A new recombinant in the heteromorphy 'S' supergene in Primula
    • Kurian, V. & Richards, A. J. (1997). A new recombinant in the heteromorphy 'S' supergene in Primula. Heredity 78, 383-390.
    • (1997) Heredity , vol.78 , pp. 383-390
    • Kurian, V.1    Richards, A.J.2
  • 27
    • 0035056575 scopus 로고    scopus 로고
    • Self-incompatibility in the genus Arabidopsis: Characterization of the S locus in the outcrossing A. lyrata and its autogamous relative, A. thaliana
    • Kusaba, M., Dwyer, K., Hendershot, J., Vrebalov, J., Nasrallah, J. B. & Nasrallah, M. E. (2001). Self-incompatibility in the genus Arabidopsis: characterization of the S locus in the outcrossing A. lyrata and its autogamous relative, A. thaliana. The Plant Cell 13, 627-643.
    • (2001) The Plant Cell , vol.13 , pp. 627-643
    • Kusaba, M.1    Dwyer, K.2    Hendershot, J.3    Vrebalov, J.4    Nasrallah, J.B.5    Nasrallah, M.E.6
  • 28
    • 0036667687 scopus 로고    scopus 로고
    • DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana: Extensive nonsynonymous variation is consistent with local selection for flowering time
    • LeCorre, V., Roux, F. & Reboud, X. (2002). DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana: Extensive nonsynonymous variation is consistent with local selection for flowering time. Molecular Biology and Evolution 19, 1261-1271.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 1261-1271
    • LeCorre, V.1    Roux, F.2    Reboud, X.3
  • 29
    • 0037847458 scopus 로고    scopus 로고
    • Recent progress in chromosome painting of Arabidopsis and related species
    • Lysak, M. A., Pecinka, A. & Schubert, I. (2003). Recent progress in chromosome painting of Arabidopsis and related species. Chromosome Research 11, 195-204.
    • (2003) Chromosome Research , vol.11 , pp. 195-204
    • Lysak, M.A.1    Pecinka, A.2    Schubert, I.3
  • 31
    • 0031193961 scopus 로고    scopus 로고
    • Physical mapping of the 5S ribosomal RNA genes in Arabidopsis thaliana by multi-color fluorescence in situ hybridization with cosmid clones
    • Murata, M., Heslop-Harrison, J. S. & Motoyoshi, F. (1997). Physical mapping of the 5S ribosomal RNA genes in Arabidopsis thaliana by multi-color fluorescence in situ hybridization with cosmid clones. The Plant Journal 12, 31-37.
    • (1997) The Plant Journal , vol.12 , pp. 31-37
    • Murata, M.1    Heslop-Harrison, J.S.2    Motoyoshi, F.3
  • 32
    • 0027449231 scopus 로고
    • Chiasma and recombination data in plants: Are they compatible?
    • Nilsson, N. O., Sall, T. & Bengtsson, B. O. (1993). Chiasma and recombination data in plants: Are they compatible? Trends in Genetics 9, 344-348.
    • (1993) Trends in Genetics , vol.9 , pp. 344-348
    • Nilsson, N.O.1    Sall, T.2    Bengtsson, B.O.3
  • 33
    • 27744554510 scopus 로고    scopus 로고
    • Correlation between sequence conservation and the genomic context after gene duplication
    • Notebaar, R. A., Huynen, M. A., Teusink, B., Siezen, R. J. & Snel, B. (2005). Correlation between sequence conservation and the genomic context after gene duplication. Nucleic Acids Research 33, 6164-6171.
    • (2005) Nucleic Acids Research , vol.33 , pp. 6164-6171
    • Notebaar, R.A.1    Huynen, M.A.2    Teusink, B.3    Siezen, R.J.4    Snel, B.5
  • 34
    • 0035184850 scopus 로고    scopus 로고
    • A short pseudoautosomal region in laboratory mice
    • Perry, J., Palmer, S., Gabriel, A. & Ashworth, A. (2001). A short pseudoautosomal region in laboratory mice. Genome Research 11, 1826-1832.
    • (2001) Genome Research , vol.11 , pp. 1826-1832
    • Perry, J.1    Palmer, S.2    Gabriel, A.3    Ashworth, A.4
  • 37
    • 0034015984 scopus 로고    scopus 로고
    • Spontaneous mutational effects on reproductive traits of Arabidopsis thaliana
    • Shaw, R. G., Byers, D. L. & Darmo, E. (2000). Spontaneous mutational effects on reproductive traits of Arabidopsis thaliana. Genetics 155, 369-378.
    • (2000) Genetics , vol.155 , pp. 369-378
    • Shaw, R.G.1    Byers, D.L.2    Darmo, E.3
  • 38
    • 1842855265 scopus 로고    scopus 로고
    • Sheltered load associated with S-alleles in Solanum carolinense
    • Stone, J. L. (2004). Sheltered load associated with S-alleles in Solanum carolinense. Heredity 92, 335-342.
    • (2004) Heredity , vol.92 , pp. 335-342
    • Stone, J.L.1
  • 39
    • 4644276942 scopus 로고    scopus 로고
    • Maximum-likelihood estimation of rates of recombination within mating-type regions
    • Takebayashi, N., Newbigin, E. & Uyenoyama, M. K. (2004). Maximum-likelihood estimation of rates of recombination within mating-type regions. Genetics 167, 2097-2109.
    • (2004) Genetics , vol.167 , pp. 2097-2109
    • Takebayashi, N.1    Newbigin, E.2    Uyenoyama, M.K.3
  • 40
    • 0017767139 scopus 로고
    • Is recombination confined to structural genes on the eukaryotic genome?
    • Thuriaux, P. (1977). Is recombination confined to structural genes on the eukaryotic genome? Nature 268, 460-462.
    • (1977) Nature , vol.268 , pp. 460-462
    • Thuriaux, P.1
  • 42
    • 0041707987 scopus 로고    scopus 로고
    • Theory of the effects of population structure and sampling on patterns of linkage disequilibrium applied to genomic data from humans
    • Wakeley, J. & Lessard, S. (2003). Theory of the effects of population structure and sampling on patterns of linkage disequilibrium applied to genomic data from humans. Genetics 164, 1043-1053.
    • (2003) Genetics , vol.164 , pp. 1043-1053
    • Wakeley, J.1    Lessard, S.2
  • 43
    • 0038075570 scopus 로고    scopus 로고
    • Subdivision and haplotype structure in natural populations of Arabidopsis lyrata
    • Wright, S. I., Lauga, B. & Charlesworth, D. (2003). Subdivision and haplotype structure in natural populations of Arabidopsis lyrata. Molecular Ecology 12, 1247-1263,
    • (2003) Molecular Ecology , vol.12 , pp. 1247-1263
    • Wright, S.I.1    Lauga, B.2    Charlesworth, D.3
  • 44
    • 0029556714 scopus 로고
    • Meiotic recombination break points resolve at high rates at the 5′ end of a maize coding sequence
    • Xu, X., Hsia, A. P., Zhang, L., Nikolau, B. J. & Schnable, P. S. (1995). Meiotic recombination break points resolve at high rates at the 5′ end of a maize coding sequence. The Plant Cell 7, 2151-2161.
    • (1995) The Plant Cell , vol.7 , pp. 2151-2161
    • Xu, X.1    Hsia, A.P.2    Zhang, L.3    Nikolau, B.J.4    Schnable, P.S.5
  • 45
    • 17844387345 scopus 로고    scopus 로고
    • Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana
    • Yogeeswaran, K., Frary, A., York, T.L. Amenta, A. Lesser, A. H., Nasrallah, J. B., Tanksley, S.D. & Nasrallah, M.E. (2005). Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana. Genome Research 15, 505-515.
    • (2005) Genome Research , vol.15 , pp. 505-515
    • Yogeeswaran, K.1    Frary, A.2    York, T.L.3    Amenta, A.4    Lesser, A.H.5    Nasrallah, J.B.6    Tanksley, S.D.7    Nasrallah, M.E.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.