Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics

BMC Bioinformatics

Volumn 8, Issue , 2007, Pages

  Jiang, Xinning ^a   Jiang, Xiaogang ^a   Han, Guanghui ^a   Ye, Mingliang ^a   Zou, Hanfa ^a  

^a DALIAN INSTITUTE OF CHEMICAL PHYSICS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DATABASE SEARCHING; FILTERING CRITERIA; MACHINE LEARNING APPROACHES; OPTIMIZATION APPROACH; PROTEOMIC ANALYSIS; SEARCHING ALGORITHMS; SHOTGUN PROTEOMICS; STATISTICAL APPROACH;

DATABASE SYSTEMS; INFORMATION RETRIEVAL; MOLECULAR BIOLOGY; OPTIMIZATION; PEPTIDES; SEARCH ENGINES;

GENETIC ALGORITHMS;

PEPTIDE; PROTEOME;

ADULT; ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; GENETIC ALGORITHM; HUMAN; HUMAN TISSUE; INFORMATION PROCESSING; MACHINE LEARNING; MALE; PREDICTION; PROCESS OPTIMIZATION; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEOMICS; SAMPLING; SCORING SYSTEM; SEQUEST DATABASE; ALGORITHM; AMINO ACID SEQUENCE; CHEMISTRY; DATA BASE; EVALUATION; INFORMATION RETRIEVAL; MASS SPECTROMETRY; METHODOLOGY; MOLECULAR GENETICS; PEPTIDE MAPPING; SEQUENCE ANALYSIS;

ALGORITHMS; AMINO ACID SEQUENCE; DATABASE MANAGEMENT SYSTEMS; DATABASES, PROTEIN; INFORMATION STORAGE AND RETRIEVAL; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PEPTIDE MAPPING; PROTEOME; PROTEOMICS; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE;

EID: 35448965232     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-323     Document Type: Article

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