Genomic implications of H2O2 for cell proliferation and growth of Caco-2 cells

Digestive Diseases and Sciences

Volumn 52, Issue 11, 2007, Pages 3005-3015

  Herring, Theresa A ^a   Cuppett, Susan L ^a   Zempleni, Janos ^a  

^a UNIVERSITY OF NEBRASKA LINCOLN   (United States)

Author keywords

Caco 2 cells; Cell proliferation; Microarray; Oxidation

Indexed keywords

ANTIOXIDANT; GLUTATHIONE PEROXIDASE 1; GLUTATHIONE PEROXIDASE 2; GLUTATHIONE PEROXIDASE 4; HYDROGEN PEROXIDE; PROTEIN TYROSINE KINASE; UNCLASSIFIED DRUG;

ANGIOGENESIS; ARTICLE; CELL ADHESION; CELL CYCLE PROGRESSION; CELL DIVISION; CELL GROWTH; CELL PROLIFERATION; CELL STRAIN CACO 2; CONTROLLED STUDY; CYTOSKELETON; ENTEROPATHY; FLOW CYTOMETRY; GENE EXPRESSION; GENOME; HUMAN; HUMAN CELL; INTESTINE INJURY; LIPOGENESIS; MICROARRAY ANALYSIS; OXIDATIVE STRESS; PRIORITY JOURNAL; RNA PROCESSING; RNA TRANSLATION;

CACO-2 CELLS; CELL PROLIFERATION; DNA, NEOPLASM; FLOW CYTOMETRY; GENE EXPRESSION REGULATION, NEOPLASTIC; GENES, NEOPLASM; HUMANS; HYDROGEN PEROXIDE; INTESTINAL MUCOSA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OXIDATIVE STRESS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

EID: 34848898960     PISSN: 01632116     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10620-006-9663-6     Document Type: Article

References (60)

1. Engler JA, Gupta A, Li L, Rao RK (1999) Inhibition of DNA synthesis in Caco-2 cells by oxidative stress. Amelioration by epidermal growth factor. Dig Dis Sci 44:1902-1909
2. Bestwick CS, Milne L (2001) Alteration of culture regime modifies antioxidant defenses independent of intracellular reactive oxygen levels and resistance to severe oxidative stress within confluent Caco-2 ''intestinal cells.'' Dig Dis Sci 46:417-423
3. Tadjali M, Seidelin JB, Olsen J, Troelsen JT (2002) Transcriptome changes during intestinal cell differentiation. Biochim Biophys Acta 1589:160-167
4. Peters WHN, Roelofs HMJ (1989) Time-dependent activity and expression of glutathione S-transferases in the human colon adenocarcinoma cell line Caco-2. Biochem J 264:613-616
5. Sun D, Lennernas H, Welage LS, Barnett JL, Landowski CP, Foster D, Fleisher D, Lee K, Amidon GL (2002) Comparison of human duodenum and Caco-2 gene expression profiles for 12,000 gene sequence tags and correlation with permeability of 26 drugs. Pharm Res 19:1400-1416
6. Desikan R, Mackerness SAH, Hancock JT, Neill SJ (2001) Regulation of the Arabidopsis transcriptome by oxidative stress. Plant Physiol 127:159-172
7. Aherne SA, O'Brien NM (1999) Protection by the flavonoids myricetin, quercetin, and rutin against hydrogen peroxide-induced DNA damage in Caco-2 and Hep G2 cells. Nutr Cancer 34:160-166
8. Rao RK, Li L, Baker RD, Baker SS, Gupta A (2000) Glutathione oxidation and PTPase inhibition by hydrogen peroxide in Caco-2 cell monolayer. Am J Physiol Gastrointest Liver Physiol 279:G332-G340
9. Mariadason JM, Arango D, Corner GA, Aranes MJ, Hotchkiss KA, Yang W, Augenlicht LH (2002) A gene expression profile that defines colon cell maturation in vitro. Cancer Res 62:4791-4804
10. Blanchard RK, Moore JB, Green CL, Cousins RJ (2001) Modulation of intestinal gene expression by dietary zinc status: effectiveness of cDNA arrays for expression profiling of a single nutrient deficiency. Proc Natl Acad Sci USA 98:13507-13513
11. Li Y, Sarkar FH (2002) Gene expression profiles of genistein-treated PC3 prostate cancer cells. J Nutr 132:3623-3631
12. Roy S, Lado BH, Khanna S, Sen CK (2002) Vitamin E sensitive genes in the developing rat fetal brain: a high-density oligonucleotide microarray analysis. FEBS Lett 530:17-23
13. Burton JL, Madsen SA, Yao J, Sipkovsky SS, Coussens PM (2001) An immunogenomics approach to understanding periparturient immunosuppression and mastitis susceptibility in dairy cows. Acta Vet Scand 42:407-424
14. 2+ release in HepG2 human hepatoblastoma cells. Biochem Biophys Res Commun 261:682-688
15. Hirschi KD, Kreps JA, Hirschi KK (2001) Molecular approaches to studying nutrient metabolism and function: an array of possibilities. J Nutr 131:1605S-1609S
16. Kaminski N, Friedman N (2002) Practical approaches to analyzing results of microarray experiments. Am J Respir Cell Mol Biol 27:125-132
17. Pfaffl MW, Gerstmayer B, Bosio A, Windisch W (2003) Effect of zinc deficiency on the mRNA expression pattern in liver and jejunum of adult rats: monitoring gene expression using cDNA microarrays combined with real-time RT-PCR. J Nutr Biochem 14:691-702
18. Corey EJ, Matsuda SPT, Bartel B (1994) Molecular cloning, characterization, and overexpression of ERG7, the Saccharomyces cerevisiae gene encoding lanosterol synthase. Proc Natl Acad Sci USA 91:2211-2215
19. Cho HP, Nakamura MT, Clarke SD (1999) Cloning, expression, and nutritional regulation of the mammalian Δ-6 desaturase. J Biol Chem 274:471-477
20. Scaglia N, Igal RA (2005) Stearoyl-CoA desaturase is involved in the control of proliferation, anchorage-independent growth, and survival in human transformed cells. J Biol Chem 280:25339-25349
21. Zhang H, Kobayashi R, Galaktionov K, Beach D (1995) p19Skp1 and p45Skp2 are essential elements of the cyclin A-CDK2 S phase kinase. Cell 82:915-925
22. Bell GI, Merryweather JP, Sanchez-Pescador R, Stempien MM, Priestley L, Scott J, Rall LB (1984) Sequence of a cDNA clone encoding human preproinsulin-like growth factor II. Nature 310:775-777
23. Russell AJ, Fincher EF, Millman L, Smith R, Vela V, Waterman EA, Dey CN, Guide S, Weaver VM, Marinkovich MP (2003) Alpha 6 beta 4 integrin regulates keratinocyte chemotaxis through differential GTPase activation and antagonism of alpha 3 beta 1 integrin. J Cell Sci 116:3543-3556
24. Lydersen BK, Pettijohn DE (1980) Human-specific nuclear protein that associates with the polar region of the mitotic apparatus: distribution in a human/hamster hybrid cell. Cell 22:489- 499
25. Meller N, Irani-Tehrani M, Kiosses WB, Del Pozo MA, Schwartz MA (2002) Zizimin1, a novel Cdc42 activator, reveals a new GEF domain for Rho proteins. Nat Cell Biol 4:639-647
26. Tian H, McKnight SL, Russell DW (1997) Endothelial PAS domain protein 1 (EPAS1), a transcription factor selectively expressed in endothelial cells. Genes Dev 11:72-82
27. Takashima S, Kitakaze M, Asakura M, Asanuma H, Sanada S, Tashiro F, Niwa H, Miyazaki Ji J, Hirota S, Kitamura Y, Kitsukawa T, Fujisawa H, Klagsbrun M, Hori M (2002) Targeting of both mouse neuropilin-1 and neuropilin-2 genes severely impairs developmental yolk sac and embryonic angiogenesis. Proc Natl Acad Sci USA 99:3657-3662
28. Cadoret A, Baron-Delage S, Bertrand F, Kornprost M, Groyer A, Gespach C, Capeau J, Cherqui G (1998) Oncogene-induced up-regulation of Caco-2 cell proliferation involves IGF-II gene activation through a protein kinase C-mediated pathway. Oncogene 17:877-887
29. Zhou G, Hashimoto Y, Kwak I, Tsai SY, Tsai MJ (2003) Role of the steroid receptor coactivator SRC-3 in cell growth. Mol Cell Biol 23:7742-7755
30. Nakatsu Y, Asahina H, Citterio E, Rademakers S, Vermeulen W, Kamiuchi S, Yeo JP, Khaw MC, Saijo M, Kodo N, Matsuda T, Hoeijmakers JH, Tanaka K (2000) XAB2, a novel tetratricopeptide repeat protein involved in transcription-coupled DNA repair and transcription. J Biol Chem 275:34931-34937
31. Ustrell V, Hoffman L, Pratt G, Rechsteiner M (2002) PA200, a nuclear proteasome activator involved in DNA repair. EMBO J 21:3516-3525
32. Valdez BC, Henning D, Busch RK, Woods K, Flores-Rozas H, Hurwitz J, Perlaky L, Busch H (1996) A nucleolar RNA helicase recognized by autoimmune antibodies from a patient with watermelon stomach disease. Nucleic Acids Res 24:1220-1224
33. Tetsuka T, Uranishi H, Sanda T, Asamitsu K, Yang JP, Wong-Staal F, Okamoto T (2004) RNA helicase A interacts with nuclear factor kappaB p65 and functions as a transcriptional coactivator. Eur J Biochem 271:3741-3751
34. Stanford DR, Kehl M, Perry CA, Holicky EL, Harvey SE, Rohleder AM, Rehder Jr K, Luhrmann R, Wieben ED (1988) The complete primary structure of the human snRNP E protein. Nucleic Acids Res 16:10593-10605
35. Krull S, Thyberg J, Bjorkroth B, Rackwitz HR, Cordes VC (2004) Nucleoporins as components of the nuclear pore complex core structure and Tpr as the architectural element of the nuclear basket. Mol Biol Cell 15:4261-4277
36. Johnson ME, Viggiano L, Bailey JA, Abdul-Rauf M, Goodwin G, Rocchi M, Eichler EE (2001) Positive selection of a gene family during the emergence of humans and African apes. Nature 413:514-519
37. Saha DP, Tirumalai PS, Scala LA, Howells RD (1993) Human ribosomal protein L37a: a cloning of the cDNA and analysis of differential gene expression in tissues and cell lines. Gene 132:285-289
38. Diefenbach RJ, Diefenbach E, Douglas MW, Cunningham AL (2004) The ribosome receptor, p180, interacts with kinesin heavy chain, KIF5B. Biochem Biophys Res Commun 319:987- 992
39. Gradi A, Imataka H, Svitkin YV, Rom E, Raught B, Morino S, Sonenberg N (1998) A novel functional human eukaryotic translation initiation factor 4G. Mol Cell Biol 18:334-342
40. +-ATPase 16 kDa subunit (ATP6VOC) genes in the murine genome. Cytogenet Genome Res 97:111- 115
41. Presley JF, Ward TH, Pfeifer AC, Siggia ED, Phair RD, Lippincott-Schwartz J (2002) Dissection of COPI and Arf1 dynamics in vivo and role in Golgi membrane transport. Nature 417:187-193
42. Takatsu H, Yoshino K, Toda K, Nakayama K (2002) GGA proteins associate with Golgi membranes through interaction between their GGAH domains and ADP-ribosylation factors. Biochem J 365:369-378
43. Landells LJ, Szilagy CM, Jones NA, Banner KH, Allen JM, Doherty A, O'Connor BJ, Spina D, Page CP (2001) Identification and quantification of phosphodiesterase 4 subtypes in CD4 and CD8 lymphocytes from healthy and asthmatic subjects. Br J Pharmacol 133:722-729
44. Frantz DJ, Hughes BG, Nelson DR, Murray BK, Christensen MJ (2000) Cell cycle arrest and differential gene expression in HT-29 cells exposed to an aqueous garlic extract. Nutr Cancer 38:255-264
45. Pelicci G, Lanfrancone L, Grignani F, McGlade J, Cavallo F, Forni G, Nicoletti I, Grignani F, Pawson T, Pelicci PG (1992) A novel transforming protein (SHC) with an SH2 domain is implicated in mitogenic signal transduction. Cell 70:93-104
46. Salgia R, Li JL, Lo SH, Brunkhorst B, Kansas GS, Sobhany ES, Sun Y, Pisick E, Hallek M, Ernst T, Tantravahi R, Chen LB, Griffin JD (1995) Molecular cloning of human paxillin, a focal adhesion protein phosphorylated by P210BCR/ABL. J Biol Chem 270:5039-5047
47. Grossmann KS, Grund C, Huelsken J, Behrend M, Erdmann B, Franke WW, Birchmeier W (2004) Requirement of plakophilin 2 for heart morphogenesis and cardiac junction formation. J Cell Biol 167:149-160
48. Geerts D, Fontao L, Nievers MG, Schaapveld RQ, Purkis PE, Wheeler GN, Lane EB, Leigh IM, Sonnenberg A (1999) Binding of integrin alpha6beta4 to plectin prevents plectin association with F-actin but does not interfere with intermediate filament binding. J Cell Biol 147:417-434
49. Lee A, Fischer RS, Fowler VM (2000) Stabilization and remodeling of the membrane skeleton during lens fiber cell differentiation and maturation. Dev Dyn 217:257-270
50. Beeler JF, LaRochelle WJ, Chedid M, Tronick SR, Aaronson SA (1994) Prokaryotic expression cloning of a novel human tyrosine kinase. Mol Cell Biol 14:982-988
51. Zhang M, Breitwieser GE (2005) High affinity interaction with filamin A protects against calcium-sensing receptor degradation. J Biol Chem 280:11140-11146
52. Swart-Mataraza JM, Li Z, Sacks DB (2002) IQGAP1 is a component of Cdc42 signaling to the cytoskeleton. J Biol Chem 277:24753-24763
53. Kotani N, Asano M, Iwakura Y, Takasaki S (2001) Knockout of mouse beta 1,4-galactosyltransferase-1 gene results in a dramatic shift of outer chain moieties of N-glycans from type 2 to type 1 chains in hepatic membrane and plasma glycoproteins. Biochem J 357:827-834
54. Coltella N, Manara MC, Cerisano V, Trusolino L, Di Renzo MF, Scotlandi K, Ferracini R (2003) Role of the MET/HGF receptor in proliferation and invasive behavior of osteosarcoma. FASEB J 17:1162-1164
55. Boulanger MJ, Chow DC, Brevnova EE, Garcia KC (2003) Hexameric structure and assembly of the interleukin-6/IL-6 alpha-receptor/gp130 complex. Science 300:2101-2104
56. Pirvola U, Ylikoski J, Trokovic R, Hebert JM, McConnell SK, Partanen J (2002) FGFR1 is required for the development of the auditory sensory epithelium. Neuron 35:671-680
57. Dong Y, Lathrop W, Weaver D, Qiu Q, Cini J, Bertolini D, Chen D (1998) Molecular cloning and characterization of LR3, a novel LDL receptor family protein with mitogenic activity. Biochem Biophys Res Commun 251:784-790
58. Cuddeback SM, Yamaguchi H, Komatsu K, Miyashita T, Yamada M, Wu C, Singh S, Wang HG (2001) Molecular cloning and characterization of Bif-1. A novel Src homology 3 domain-containing protein that associates with Bax. J Biol Chem 276:20559-20565
59. Hirata T, Nagai H, Koizumi K, Okino K, Harada A, Onda M, Nagahata T, Mikami I, Hirai K, Haraguchi S, Jin E, Kawanami O, Shimizu K, Emi M (2004) Amplification, up-regulation and over-expression of C3G (CRK SH3 domain-binding guanine nucleotide-releasing factor) in non-small cell lung cancers. J Hum Genet 49:290-295
60. Cheng JQ, Godwin AK, Bellacosa A, Taguchi T, Franke TF, Hamilton TC, Tsichlis PN, Testa JR (1992) AKT2, a putative oncogene encoding a member of a subfamily of protein-serine/threonine kinases, is amplified in human ovarian carcinomas. Proc Natl Acad Sci USA 89:9267-9271