-
2
-
-
30544454226
-
Active site structure and catalytic mechanisms of human peroxidases
-
Furtmuller PG, Zederbauer M, Jantschko W, Helm J, Bogner M, Jakopitsch C, Obinger C. Active site structure and catalytic mechanisms of human peroxidases. Arch Biochem Biophys 2006;445:199-213.
-
(2006)
Arch Biochem Biophys
, vol.445
, pp. 199-213
-
-
Furtmuller, P.G.1
Zederbauer, M.2
Jantschko, W.3
Helm, J.4
Bogner, M.5
Jakopitsch, C.6
Obinger, C.7
-
3
-
-
0032730385
-
Molecular evolution of thyroid peroxidase
-
Taurog A. Molecular evolution of thyroid peroxidase. Biochimie 1999;81:557-562.
-
(1999)
Biochimie
, vol.81
, pp. 557-562
-
-
Taurog, A.1
-
4
-
-
11944274967
-
Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: Inferences from the rice genome
-
Teixeira FK, Menezes-Benavente L, Margis R, Margis-Pinheiro M. Analysis of the molecular evolutionary history of the ascorbate peroxidase gene family: inferences from the rice genome. J Mol Evol 2004;59:761-770.
-
(2004)
J Mol Evol
, vol.59
, pp. 761-770
-
-
Teixeira, F.K.1
Menezes-Benavente, L.2
Margis, R.3
Margis-Pinheiro, M.4
-
5
-
-
0036817336
-
Complexes between m-chloroperoxybenzoic acid and horseradish peroxidase compounds I and II: Implications for the kinetics of enzyme inactivation
-
Hiner AN, Hernandez Ruiz J, Arnao MB, Rodriguez Lopez JN, Garcia Canovas F, Acosta M. Complexes between m-chloroperoxybenzoic acid and horseradish peroxidase compounds I and II: implications for the kinetics of enzyme inactivation. J Enzyme Inhib Med Chem 2002;17:287-291.
-
(2002)
J Enzyme Inhib Med Chem
, vol.17
, pp. 287-291
-
-
Hiner, A.N.1
Hernandez Ruiz, J.2
Arnao, M.B.3
Rodriguez Lopez, J.N.4
Garcia Canovas, F.5
Acosta, M.6
-
6
-
-
0021519023
-
2-requiring diarylpropane oxygenase from the white rot basidiomycete, Phanerochaete chrysosporium
-
2-requiring diarylpropane oxygenase from the white rot basidiomycete, Phanerochaete chrysosporium. Arch Biochem Biophys 1984;234:353-362.
-
(1984)
Arch Biochem Biophys
, vol.234
, pp. 353-362
-
-
Gold, M.H.1
Kuwahara, M.2
Chiu, A.A.3
Glenn, J.K.4
-
7
-
-
0028587337
-
The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06 Å resolution
-
Sundaramoorthy M, Kishi K, Gold MH, Poulos TL. The crystal structure of manganese peroxidase from Phanerochaete chrysosporium at 2.06 Å resolution. J Biol Chem 1994;269:32759-32767.
-
(1994)
J Biol Chem
, vol.269
, pp. 32759-32767
-
-
Sundaramoorthy, M.1
Kishi, K.2
Gold, M.H.3
Poulos, T.L.4
-
8
-
-
0142075823
-
The peroxidase gene family in plants: A phylogenetic overview
-
Duroux L, Welinder KG. The peroxidase gene family in plants: a phylogenetic overview. J Mol Evol 2003;57:397-407.
-
(2003)
J Mol Evol
, vol.57
, pp. 397-407
-
-
Duroux, L.1
Welinder, K.G.2
-
9
-
-
32644479903
-
PeroxiBase: A class III plant peroxidase database
-
Bakalovic N, Passardi F, Ioannidis V, Cosio C, Penel C, Falquet L, Dunand C. PeroxiBase: a class III plant peroxidase database. Phytochemistry 2006;67:534-539.
-
(2006)
Phytochemistry
, vol.67
, pp. 534-539
-
-
Bakalovic, N.1
Passardi, F.2
Ioannidis, V.3
Cosio, C.4
Penel, C.5
Falquet, L.6
Dunand, C.7
-
10
-
-
0017133108
-
Mossbauer spectroscopic study of compound ES of cytochrome c peroxidase
-
Lang G, Spartalian K, Yonetani T. Mossbauer spectroscopic study of compound ES of cytochrome c peroxidase. Biochim Biophys Acta 1976;451:250-258.
-
(1976)
Biochim Biophys Acta
, vol.451
, pp. 250-258
-
-
Lang, G.1
Spartalian, K.2
Yonetani, T.3
-
11
-
-
0019887437
-
Evidence for heme pi cation radical species in compound I of horseradish peroxidase and catalase
-
Browlett WR, Stillman MJ. Evidence for heme pi cation radical species in compound I of horseradish peroxidase and catalase. Biochim Biophys Acta 1981;660:1-7.
-
(1981)
Biochim Biophys Acta
, vol.660
, pp. 1-7
-
-
Browlett, W.R.1
Stillman, M.J.2
-
12
-
-
0019320452
-
Formation of porphyrin pi cation radical in zinc-substituted horseradish peroxidase
-
Kaneko Y, Tamura M, Yamazaki I. Formation of porphyrin pi cation radical in zinc-substituted horseradish peroxidase. Biochemistry 1980;19:5795-5799.
-
(1980)
Biochemistry
, vol.19
, pp. 5795-5799
-
-
Kaneko, Y.1
Tamura, M.2
Yamazaki, I.3
-
13
-
-
0014010171
-
Studies on cytochrome c peroxidase. III. Kinetics of the peroxidatic oxidation of ferrocytochrome c catalyzed by cytochrome c peroxidase
-
Yonetani T, Ray GS. Studies on cytochrome c peroxidase. III. Kinetics of the peroxidatic oxidation of ferrocytochrome c catalyzed by cytochrome c peroxidase. J Biol Chem 1966;241:700-706.
-
(1966)
J Biol Chem
, vol.241
, pp. 700-706
-
-
Yonetani, T.1
Ray, G.S.2
-
14
-
-
0033524352
-
Decolorization of molasses and a dye by a newly isolated strain of the fungus Geotrichum candidum Dec 1
-
Kim SJ, Shoda M. Decolorization of molasses and a dye by a newly isolated strain of the fungus Geotrichum candidum Dec 1. Biotechnol Bioeng 1999;62:114-119.
-
(1999)
Biotechnol Bioeng
, vol.62
, pp. 114-119
-
-
Kim, S.J.1
Shoda, M.2
-
15
-
-
0038702590
-
Isolation and cDNA cloning of novel hydrogen peroxide-dependent phenol oxidase from the basidiomycete Termitomyces albuminosus
-
Johjima T, Ohkuma M, Kudo T. Isolation and cDNA cloning of novel hydrogen peroxide-dependent phenol oxidase from the basidiomycete Termitomyces albuminosus. Appl Microbiol Biotechnol 2003;61:220-225.
-
(2003)
Appl Microbiol Biotechnol
, vol.61
, pp. 220-225
-
-
Johjima, T.1
Ohkuma, M.2
Kudo, T.3
-
16
-
-
21344463375
-
Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8
-
Ebihara A, Okamoto A, Kousumi Y, Yamamoto H, Masui R, Ueyama N, Yokoyama S, Kuramitsu S. Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8. J Struct Funct Genomics 2005;6:21-32.
-
(2005)
J Struct Funct Genomics
, vol.6
, pp. 21-32
-
-
Ebihara, A.1
Okamoto, A.2
Kousumi, Y.3
Yamamoto, H.4
Masui, R.5
Ueyama, N.6
Yokoyama, S.7
Kuramitsu, S.8
-
17
-
-
4143128834
-
A unique dye-decolorizing peroxidase, DyP, from Thanatephorus cucumeris Dec 1: Heterologous expression, crystallization and preliminary X-ray analysis
-
Sato T, Hara S, Matsui T, Sazaki G, Saijo S, Ganbe T, Tanaka N, Sugano Y, Shoda M. A unique dye-decolorizing peroxidase, DyP, from Thanatephorus cucumeris Dec 1: heterologous expression, crystallization and preliminary X-ray analysis. Acta Crystallogr D Biol Crystallogr 2004;60:149-152.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 149-152
-
-
Sato, T.1
Hara, S.2
Matsui, T.3
Sazaki, G.4
Saijo, S.5
Ganbe, T.6
Tanaka, N.7
Sugano, Y.8
Shoda, M.9
-
18
-
-
34548809711
-
-
Zubieta C, Krishna SS, Kapoor M, Kozbial P, McMullan D, Axelrod HL, Miller MD, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Hampton E, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Schimmel P, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA. Crystal structures of two novel dye-decolorizing peroxidases reveal a β-barrel fold with a conserved heme-binding motif. Proteins 2007;69:223-233.
-
Zubieta C, Krishna SS, Kapoor M, Kozbial P, McMullan D, Axelrod HL, Miller MD, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Hampton E, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Schimmel P, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA. Crystal structures of two novel dye-decolorizing peroxidases reveal a β-barrel fold with a conserved heme-binding motif. Proteins 2007;69:223-233.
-
-
-
-
19
-
-
0023056543
-
Cytochrome c peroxidase compound ES is identical with horseradish peroxide compound I in iron-ligand distances
-
Chance M, Powers L, Poulos T, Chance B. Cytochrome c peroxidase compound ES is identical with horseradish peroxide compound I in iron-ligand distances. Biochemistry 1986;25:1266-1270.
-
(1986)
Biochemistry
, vol.25
, pp. 1266-1270
-
-
Chance, M.1
Powers, L.2
Poulos, T.3
Chance, B.4
-
20
-
-
33744917575
-
YcdB from Escherichia coli reveals a novel class of Tat-dependently translocated hemoproteins
-
Sturm A, Schierhorn A, Lindenstrauss U, Lilie H, Bruser T. YcdB from Escherichia coli reveals a novel class of Tat-dependently translocated hemoproteins. J Biol Chem 2006;281:13972-13978.
-
(2006)
J Biol Chem
, vol.281
, pp. 13972-13978
-
-
Sturm, A.1
Schierhorn, A.2
Lindenstrauss, U.3
Lilie, H.4
Bruser, T.5
-
21
-
-
0032031476
-
Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of γB- and βB2-crystallin
-
Tickle IJ, Laskowski RA, Moss DS. Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of γB- and βB2-crystallin. Acta Crystallogr D Biol Crystallogr 1998;54:243-252.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 243-252
-
-
Tickle, I.J.1
Laskowski, R.A.2
Moss, D.S.3
-
22
-
-
0028103275
-
-
The CCP4 suite: programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 1994;50:760-763.
-
The CCP4 suite: programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 1994;50:760-763.
-
-
-
-
23
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch W. Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J Appl Crystallogr 1993;26:795-800.
-
(1993)
J Appl Crystallogr
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
26
-
-
0013461295
-
Macromolecular TLS refinement in REFMAC at moderate resolutions
-
Winn MD, Murshudov GN, Papiz MZ. Macromolecular TLS refinement in REFMAC at moderate resolutions. Methods Enzymol 2003;374:300-321.
-
(2003)
Methods Enzymol
, vol.374
, pp. 300-321
-
-
Winn, M.D.1
Murshudov, G.N.2
Papiz, M.Z.3
-
27
-
-
16644393507
-
Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank
-
Yang H, Guranovic V, Dutta S, Feng Z, Berman HM, Westbrook JD. Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank. Acta Crystallogr D Biol Crystallogr 2004;60:1833-1839.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 1833-1839
-
-
Yang, H.1
Guranovic, V.2
Dutta, S.3
Feng, Z.4
Berman, H.M.5
Westbrook, J.D.6
-
28
-
-
0037441653
-
-
Lovell SC, Davis IW, Arendall WB, 3rd, de Bakker PI, Word JM, Prisant MG, Richardson JS, Richardson DC. Structure validation by Cα geometry: π, ψ and Cβ deviation. Proteins 2003;50:437-450.
-
Lovell SC, Davis IW, Arendall WB, 3rd, de Bakker PI, Word JM, Prisant MG, Richardson JS, Richardson DC. Structure validation by Cα geometry: π, ψ and Cβ deviation. Proteins 2003;50:437-450.
-
-
-
-
29
-
-
0025609563
-
Parameter relation rows: A query system for protein structure function relationships
-
Vriend G. Parameter relation rows: a query system for protein structure function relationships. Protein Eng 1990;4:221-223.
-
(1990)
Protein Eng
, vol.4
, pp. 221-223
-
-
Vriend, G.1
-
30
-
-
0027231963
-
The Asp-His-Fe triad of cytochrome c peroxidase controls the reduction potential, electronic structure, and coupling of the tryptophan free radical to the heme
-
Goodin DB, McRee DE. The Asp-His-Fe triad of cytochrome c peroxidase controls the reduction potential, electronic structure, and coupling of the tryptophan free radical to the heme. Biochemistry 1993;32:3313-3324.
-
(1993)
Biochemistry
, vol.32
, pp. 3313-3324
-
-
Goodin, D.B.1
McRee, D.E.2
-
31
-
-
0021723457
-
Crystal structure of yeast cytochrome c peroxidase refined at 1.7-A resolution
-
Finzel BC, Poulos TL, Kraut J. Crystal structure of yeast cytochrome c peroxidase refined at 1.7-A resolution. J Biol Chem 1984;259:13027-13036.
-
(1984)
J Biol Chem
, vol.259
, pp. 13027-13036
-
-
Finzel, B.C.1
Poulos, T.L.2
Kraut, J.3
-
32
-
-
0028773124
-
Laue diffraction study on the structure of cytochrome c peroxidase compound I
-
Fulop V, Phizackerley RP, Soltis SM, Clifton IJ, Wakatsuki S, Erman J, Hajdu J, Edwards SL. Laue diffraction study on the structure of cytochrome c peroxidase compound I. Structure 1994;2:201-208.
-
(1994)
Structure
, vol.2
, pp. 201-208
-
-
Fulop, V.1
Phizackerley, R.P.2
Soltis, S.M.3
Clifton, I.J.4
Wakatsuki, S.5
Erman, J.6
Hajdu, J.7
Edwards, S.L.8
-
33
-
-
0032170496
-
Stereochemistry of the chloroperoxidase active site: Crystallographic and molecular-modeling studies
-
Sundaramoorthy M, Terner J, Poulos TL. Stereochemistry of the chloroperoxidase active site: crystallographic and molecular-modeling studies. Chem Biol 1998;5:461-473.
-
(1998)
Chem Biol
, vol.5
, pp. 461-473
-
-
Sundaramoorthy, M.1
Terner, J.2
Poulos, T.L.3
-
34
-
-
0031149926
-
Identification of intermediates in the catalytic cycle of chloroperoxidase
-
Wagenknecht HA, Woggon WD. Identification of intermediates in the catalytic cycle of chloroperoxidase. Chem Biol 1997;4:367-372.
-
(1997)
Chem Biol
, vol.4
, pp. 367-372
-
-
Wagenknecht, H.A.1
Woggon, W.D.2
|