Response and fluctuations of a two-state signaling module with feedback

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 76, Issue 2, 2007, Pages

  Gopalakrishnan, Manoj ^a   Borowski, Peter ^a   Jülicher, Frank ^a   Zapotocky, Martin ^a  

^a MAX PLANCK INSTITUT FÜR PHYSIK KOMPLEXER SYSTEME   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER SIMULATION; FEEDBACK; PERTURBATION TECHNIQUES; SENSORY FEEDBACK; STATISTICS; STOCHASTIC CONTROL SYSTEMS;

ANALYTICAL RESULTS; SYSTEMATIC FRAMEWORK;

SIGNAL SYSTEMS;

EID: 34547837670     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.76.021904     Document Type: Article

References (42)

1. H. C. Berg and E. M. Purcell, Biophys. J. BIOJAU 0006-3495 20, 193 (1977).
2. W. Bialek, Annu. Rev. Biophys. Biophys. Chem. ARBCEY 0883-9182 10.1146/annurev.bb.16.060187.002323 16, 455 (1987).
3. C. V. Rao, D. M. Wolf, and A. P. Arkin, Nature (London) NATUAS 0028-0836 10.1038/nature01258 420, 231 (2002).
4. M. Falcke, L. S. Tsimring, and H. Levine, Phys. Rev. E PLEEE8 1063-651X 10.1103/PhysRevE.62.2636 62, 2636 (2000).
5. T. B. Kepler and T. C. Elston, Biophys. J. BIOJAU 0006-3495 81, 3116 (2001).
6. P. S. Swain, M. B. Elowitz, and E. D. Siggia, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.162041399 99, 12795 (2002).
7. J. Paulsson, Nature (London) NATUAS 0028-0836 10.1038/nature02257 427, 415 (2004).
8. U. S. Bhalla, Biophys. J. BIOJAU 0006-3495 10.1529/biophysj.104.040469 87, 733 (2004).
9. B. Mazzag, C. J. Tignanelli, and G. D. Smith, J. Theor. Biol. JTBIAP 0022-5193 235, 121 (2005).
10. W. Bialek and S. Setayeshgar, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.0504321102 102, 10040 (2005).
11. I. Goychuk, P. Hänggi, J. L. Vega, and S. Miret-Artes, Phys. Rev. E PLEEE8 1063-651X 10.1103/PhysRevE.71.061906 71, 061906 (2005).
12. A. Arkin, J. Ross, and H. H. McAdams, Genetics GENTAE 0016-6731 149, 1633 (1998).
13. J. M. Vilar, H. Y. Kueh, N. Barkai, and S. Leibler, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.092133899 99, 5988 (2002).
14. C. McNeilage, E. N. Ivanov, P. R. Stockwell, and J. H. Searls, Proceedings of the IEEE 1998 International Frequency Control Symposium (IEEE Press, New York, 1998), 146 (1998).
15. L. H. Hartwell, J. J. Hopfield, S. Leibler, and A. W. Murray, Nature (London) NATUAS 0028-0836 10.1038/35011540 402, C47 (1999).
16. E. Yeger-Lotem, S. Sattath, N. Kashtan, S. Itzkovitz, R. Milo, R. Y. Pinter, U. Alon, and H. Margalit, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.0306752101 101, 5934 (2004).
17. P. B. Detwiler, S. Ramanathan, A. Sengupta, and B. Shraiman, Biophys. J. BIOJAU 0006-3495 79, 2801 (2000).
18. S. Firestein, Nature (London) NATUAS 0028-0836 413, 211 (2001).
19. D. Schild and D. Restrepo, Physiol. Rev. PHREA7 0031-9333 78, 429 (1998).
20. N. G. van Kampen, Stochastic Processes in Physics and Chemistry (North-Holland, Amsterdam, 1992).
21. M. Thattai and A. van Oudenaarden, Biophys. J. BIOJAU 0006-3495 82, 2943 (2002).
22. I. Goychuk and P. Hänggi, Phys. Rev. E PLEEE8 1063-651X 10.1103/PhysRevE.61.4272 61, 4272 (2000).
23. F. Zufall and T. Leinders-Zufall, Chem. Senses ZZZZZZ 0379-864X 25, 473 (2000).
24. J. Bradley, D. Reuter, and S. Frings, Science SCIEAS 0036-8075 294, 2176 (2001).
25. J. Reidl, P. Borowski, A. Sensse, J. Starke, M. Zapotocky, and M. Eiswirth, Biophys. J. BIOJAU 0006-3495 90, 1147 (2006).
26. L. D. Landau and E. M. Lifshitz, Statistical Physics, Part (Pergamon Press, New York, 1997).
27. P. Martin, A. J. Hudspeth, and F. Jülicher, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.251530598 98, 14380 (2001).
28. M. L. Simpson, C. D. Cox, and G. S. Sayler, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 10.1073/pnas.0736140100 100, 4551 (2003).
29. P. Borowski, dissertation, TU Dresden, 2006.
30. J. Bradley, J. Reisert, and S. Frings, Curr. Opin. Neurobiol. COPUEN 0959-4388 15, 343 (2005).
31. S. Pifferi, A. Boccaccio, and A. Menini, FEBS Lett. FEBLAL 0014-5793 580, 2853 (2006).
32. V. Bhandawat, J. Reisert, and K. W. Yau, Science SCIEAS 0036-8075 308, 1931 (2005).
33. S. R. Henderson, H. Reuss, and R. C. Hardie, J. Physiol. (London) JPHYA7 0022-3751 524, 179 (2000).
34. H. Takeuchi and T. Kurahashi, J. Physiol. (London) JPHYA7 0022-3751 541, 825 (2002).
35. G. Lowe and G. H. Gold, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 92, 7864 (1995).
36. D. T. Gillespie, J. Phys. Chem. JPCHAX 0022-3654 10.1021/j100540a008 81, 2340 (1977).
37. J. Reisert, P. J. Bauer, K. W. Yau, and S. Frings, J. Gen. Physiol. JGPLAD 0022-1295 122, 349 (2003).
38. M. Ruiz and J. W. Karpen, J. Gen. Physiol. JGPLAD 0022-1295 113, 873 (1999).
39. P. Gavazzo, C. Picco, E. Eismann, U. B. Kaupp, and A. Menini, J. Gen. Physiol. JGPLAD 0022-1295 116, 311 (2000).
40. U. Kaupp and R. Seifert, Physiol. Rev. PHREA7 0031-9333 82, 769 (2002).
41. S. J. Kleene, J. Neurophysiol. JONEA4 0022-3077 81, 2675 (1999).
42. J. Bradley, W. Bönigk, K. W. Yau, and S. Frings, Nat. Neurosci. NANEFN 1097-6256 7, 705 (2004).