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Volumn 1769, Issue 7-8, 2007, Pages 462-471

Modulation of 16S rRNA function by ribosomal protein S12

Author keywords

Capreomycin; Paromomycin; Ribosomal protein S12; Streptomycin; Translation

Indexed keywords

AMINOGLYCOSIDE; ANTIBIOTIC G 418; CAPREOMYCIN; GENTAMICIN; KANAMYCIN A; NEOMYCIN; PAROMOMYCIN; PROLINE; RIBOSOMAL PROTEIN S12; RIBOSOME PROTEIN; RNA 16S; STREPTOMYCIN; TRANSFER RNA; UNCLASSIFIED DRUG;

EID: 34447562896     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbaexp.2007.04.004     Document Type: Article
Times cited : (24)

References (51)
  • 1
    • 18844413446 scopus 로고    scopus 로고
    • Structural insights into translational fidelity
    • Ogle J.M., and Ramakrishnan V. Structural insights into translational fidelity. Annu. Rev. Biochem. 74 (2005) 129-177
    • (2005) Annu. Rev. Biochem. , vol.74 , pp. 129-177
    • Ogle, J.M.1    Ramakrishnan, V.2
  • 2
    • 0038403669 scopus 로고    scopus 로고
    • Insights into the decoding mechanism from recent ribosome structures
    • Ogle J.M., Carter A.P., and Ramakrishnan V. Insights into the decoding mechanism from recent ribosome structures. Trends Biochem. Sci. 28 (2003) 259-266
    • (2003) Trends Biochem. Sci. , vol.28 , pp. 259-266
    • Ogle, J.M.1    Carter, A.P.2    Ramakrishnan, V.3
  • 3
    • 0037184536 scopus 로고    scopus 로고
    • Selection of tRNA by the ribosome requires a transition from an open to a closed form
    • Ogle J.M., Murphy F.V., Tarry M.J., and Ramakrishnan V. Selection of tRNA by the ribosome requires a transition from an open to a closed form. Cell 111 (2002) 721-732
    • (2002) Cell , vol.111 , pp. 721-732
    • Ogle, J.M.1    Murphy, F.V.2    Tarry, M.J.3    Ramakrishnan, V.4
  • 7
    • 84958116650 scopus 로고
    • Spontaneous mutation to streptomycin resistance and dependence in Escherichia coli
    • Newcombe H.B., and Hawirko R. Spontaneous mutation to streptomycin resistance and dependence in Escherichia coli. J. Bacteriol. 57 (1949) 565-572
    • (1949) J. Bacteriol. , vol.57 , pp. 565-572
    • Newcombe, H.B.1    Hawirko, R.2
  • 8
    • 0023615466 scopus 로고
    • Mechanism of bactericidal action of aminoglycosides
    • Davis B.D. Mechanism of bactericidal action of aminoglycosides. Rev 51 (1987) 341-350
    • (1987) Rev , vol.51 , pp. 341-350
    • Davis, B.D.1
  • 9
    • 0014992066 scopus 로고
    • Genetic analysis of streptomycin dependence in Escherichia coli
    • Momose H., and Gorini L. Genetic analysis of streptomycin dependence in Escherichia coli. Genetics 67 (1971) 19-38
    • (1971) Genetics , vol.67 , pp. 19-38
    • Momose, H.1    Gorini, L.2
  • 10
    • 0015222988 scopus 로고
    • Drug dependence reversed by a ribosomal ambiguity mutation, ram, in Escherichia coli
    • Bjare U., and Gorini L. Drug dependence reversed by a ribosomal ambiguity mutation, ram, in Escherichia coli. J. Mol. Biol. 57 (1971) 423-435
    • (1971) J. Mol. Biol. , vol.57 , pp. 423-435
    • Bjare, U.1    Gorini, L.2
  • 11
    • 0032896612 scopus 로고    scopus 로고
    • Novel ribosomal mutations affecting translational accuracy, antibiotic resistance and virulence of Salmonella typhimurium
    • Bjorkman J., Samuelsson P., Andersson D.I., and Hughes D. Novel ribosomal mutations affecting translational accuracy, antibiotic resistance and virulence of Salmonella typhimurium. Mol. Microbiol. 31 (1999) 53-58
    • (1999) Mol. Microbiol. , vol.31 , pp. 53-58
    • Bjorkman, J.1    Samuelsson, P.2    Andersson, D.I.3    Hughes, D.4
  • 12
    • 0036431723 scopus 로고    scopus 로고
    • Compensatory adaptation to the deleterious effect of antibiotic resistance in Salmonella typhimurium
    • Maisnier-Patin S., Berg O.G., Liljas L., and Andersson D.I. Compensatory adaptation to the deleterious effect of antibiotic resistance in Salmonella typhimurium. Mol. Microbiol. 46 (2002) 355-366
    • (2002) Mol. Microbiol. , vol.46 , pp. 355-366
    • Maisnier-Patin, S.1    Berg, O.G.2    Liljas, L.3    Andersson, D.I.4
  • 14
    • 0023689711 scopus 로고
    • A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin
    • Melancon P., Lemieux C., and Brakier-Gingras L. A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin. Nucleic Acids Res. 16 (1988) 9631-9639
    • (1988) Nucleic Acids Res. , vol.16 , pp. 9631-9639
    • Melancon, P.1    Lemieux, C.2    Brakier-Gingras, L.3
  • 15
    • 0025916683 scopus 로고
    • Mutations in the 915 region of Escherichia coli 16S ribosomal RNA reduce the binding of streptomycin to the ribosome
    • Leclerc D., Melancon P., and Brakier-Gingras L. Mutations in the 915 region of Escherichia coli 16S ribosomal RNA reduce the binding of streptomycin to the ribosome. Nucleic Acids Res. 19 (1991) 3973-3977
    • (1991) Nucleic Acids Res. , vol.19 , pp. 3973-3977
    • Leclerc, D.1    Melancon, P.2    Brakier-Gingras, L.3
  • 16
    • 21844446585 scopus 로고    scopus 로고
    • Mutational analysis of 16S and 23S rRNA genes of Thermus thermophilus
    • Gregory S.T., Carr J.F., Rodriguez-Correa D., and Dahlberg A.E. Mutational analysis of 16S and 23S rRNA genes of Thermus thermophilus. J. Bacteriol. 187 (2005) 4804-4812
    • (2005) J. Bacteriol. , vol.187 , pp. 4804-4812
    • Gregory, S.T.1    Carr, J.F.2    Rodriguez-Correa, D.3    Dahlberg, A.E.4
  • 17
    • 0025305692 scopus 로고
    • Effects of mutagenesis of a conserved base-paired site near the decoding region of Escherichia coli 16 S ribosomal RNA
    • De Stasio E.A., and Dahlberg A.E. Effects of mutagenesis of a conserved base-paired site near the decoding region of Escherichia coli 16 S ribosomal RNA. J. Mol. Biol. 212 (1990) 127-133
    • (1990) J. Mol. Biol. , vol.212 , pp. 127-133
    • De Stasio, E.A.1    Dahlberg, A.E.2
  • 18
    • 0033515041 scopus 로고    scopus 로고
    • An Escherichia coli strain with all chromosomal rRNA operons inactivated: complete exchange of rRNA genes between bacteria
    • Asai T., Zaporojets D., Squires C., and Squires C.L. An Escherichia coli strain with all chromosomal rRNA operons inactivated: complete exchange of rRNA genes between bacteria. Proc. Natl. Acad. Sci. U. S. A. 96 (1999) 1971-1976
    • (1999) Proc. Natl. Acad. Sci. U. S. A. , vol.96 , pp. 1971-1976
    • Asai, T.1    Zaporojets, D.2    Squires, C.3    Squires, C.L.4
  • 19
    • 0026703121 scopus 로고
    • A ribosomal ambiguity mutation in the 530 loop of E. coli 16S rRNA
    • O'Connor M., Goringer H.U., and Dahlberg A.E. A ribosomal ambiguity mutation in the 530 loop of E. coli 16S rRNA. Nucleic Acids Res. 20 (1992) 4221-4227
    • (1992) Nucleic Acids Res. , vol.20 , pp. 4221-4227
    • O'Connor, M.1    Goringer, H.U.2    Dahlberg, A.E.3
  • 21
    • 0033011939 scopus 로고    scopus 로고
    • Construction and initial characterization of Escherichia coli strains with few or no intact chromosomal rRNA operons
    • Asai T., Condon C., Voulgaris J., Zaporojets D., Shen B., Al-Omar M., Squires C., and Squires C.L. Construction and initial characterization of Escherichia coli strains with few or no intact chromosomal rRNA operons. J. Bacteriol. 181 (1999) 3803-3809
    • (1999) J. Bacteriol. , vol.181 , pp. 3803-3809
    • Asai, T.1    Condon, C.2    Voulgaris, J.3    Zaporojets, D.4    Shen, B.5    Al-Omar, M.6    Squires, C.7    Squires, C.L.8
  • 22
    • 0032078373 scopus 로고    scopus 로고
    • The importance of base pairing in the penultimate stem of Escherichia coli 16S rRNA for ribosomal subunit association
    • Firpo M.A., and Dahlberg A.E. The importance of base pairing in the penultimate stem of Escherichia coli 16S rRNA for ribosomal subunit association. Nucleic Acids Res. 26 (1998) 2156-2160
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2156-2160
    • Firpo, M.A.1    Dahlberg, A.E.2
  • 23
    • 0035253420 scopus 로고    scopus 로고
    • Mutagenesis of the peptidyltransferase center of 23S rRNA: the invariant U2449 is dispensable
    • O'Connor M., Lee W.M., Mankad A., Squires C.L., and Dahlberg A.E. Mutagenesis of the peptidyltransferase center of 23S rRNA: the invariant U2449 is dispensable. Nucleic Acids Res. 29 (2001) 710-715
    • (2001) Nucleic Acids Res. , vol.29 , pp. 710-715
    • O'Connor, M.1    Lee, W.M.2    Mankad, A.3    Squires, C.L.4    Dahlberg, A.E.5
  • 24
    • 0036884873 scopus 로고    scopus 로고
    • Isolation of spectinomycin resistance mutations in the 16S rRNA of Salmonella enterica serovar Typhimurium and expression in Escherichia coli and Salmonella
    • O'Connor M., and Dahlberg A.E. Isolation of spectinomycin resistance mutations in the 16S rRNA of Salmonella enterica serovar Typhimurium and expression in Escherichia coli and Salmonella. Curr. Microbiol. 45 (2002) 429-433
    • (2002) Curr. Microbiol. , vol.45 , pp. 429-433
    • O'Connor, M.1    Dahlberg, A.E.2
  • 25
  • 26
    • 0027506721 scopus 로고
    • Suppression of rpsL phenotypes by tuf mutations reveals a unique relationship between translation elongation and growth rate
    • Tubulekas I., and Hughes D. Suppression of rpsL phenotypes by tuf mutations reveals a unique relationship between translation elongation and growth rate. Mol. Microbiol. 7 (1993) 275-284
    • (1993) Mol. Microbiol. , vol.7 , pp. 275-284
    • Tubulekas, I.1    Hughes, D.2
  • 27
    • 0025866195 scopus 로고
    • Mutant ribosomes can generate dominant kirromycin resistance
    • Tubulekas I., Buckingham R.H., and Hughes D. Mutant ribosomes can generate dominant kirromycin resistance. J. Bacteriol. 173 (1991) 3635-3643
    • (1991) J. Bacteriol. , vol.173 , pp. 3635-3643
    • Tubulekas, I.1    Buckingham, R.H.2    Hughes, D.3
  • 28
    • 18244364594 scopus 로고    scopus 로고
    • Severity of the streptomycin resistance and streptomycin dependence phenotypes of ribosomal protein S12 of Thermus thermophilus depends on the identity of highly conserved amino acid residues
    • Carr J.F., Gregory S.T., and Dahlberg A.E. Severity of the streptomycin resistance and streptomycin dependence phenotypes of ribosomal protein S12 of Thermus thermophilus depends on the identity of highly conserved amino acid residues. J. Bacteriol. 187 (2005) 3548-3550
    • (2005) J. Bacteriol. , vol.187 , pp. 3548-3550
    • Carr, J.F.1    Gregory, S.T.2    Dahlberg, A.E.3
  • 29
    • 0016725415 scopus 로고
    • Analysis of ribosomal proteins in streptomycin resistant and dependent mutants isolated from streptomycin independent Escherichia coli strains
    • Wittmann H.G., and Apirion D. Analysis of ribosomal proteins in streptomycin resistant and dependent mutants isolated from streptomycin independent Escherichia coli strains. Mol. Gen. Genet. 141 (1975) 331-341
    • (1975) Mol. Gen. Genet. , vol.141 , pp. 331-341
    • Wittmann, H.G.1    Apirion, D.2
  • 30
    • 0029165449 scopus 로고
    • Growth rate effects of mutations conferring streptomycin-dependence and of ancillary mutations in the rpsL gene of Escherichia coli: implications for the clustering (hypermutation) hypothesis for spontaneous mutation
    • Timms A.R., Dewan K.K., and Bridges B.A. Growth rate effects of mutations conferring streptomycin-dependence and of ancillary mutations in the rpsL gene of Escherichia coli: implications for the clustering (hypermutation) hypothesis for spontaneous mutation. Mutagenesis 10 (1995) 463-466
    • (1995) Mutagenesis , vol.10 , pp. 463-466
    • Timms, A.R.1    Dewan, K.K.2    Bridges, B.A.3
  • 31
    • 0027323589 scopus 로고
    • Double, independent mutational events in the rpsL gene of Escherichia coli: an example of hypermutability?
    • Timms A.R., and Bridges B.A. Double, independent mutational events in the rpsL gene of Escherichia coli: an example of hypermutability?. Mol. Microbiol. 9 (1993) 335-342
    • (1993) Mol. Microbiol. , vol.9 , pp. 335-342
    • Timms, A.R.1    Bridges, B.A.2
  • 32
    • 0035367324 scopus 로고    scopus 로고
    • Streptomycin-resistant and streptomycin-dependent mutants of the extreme thermophile Thermus thermophilus
    • Gregory S.T., Cate J.H., and Dahlberg A.E. Streptomycin-resistant and streptomycin-dependent mutants of the extreme thermophile Thermus thermophilus. J. Mol. Biol. 309 (2001) 333-338
    • (2001) J. Mol. Biol. , vol.309 , pp. 333-338
    • Gregory, S.T.1    Cate, J.H.2    Dahlberg, A.E.3
  • 33
    • 12544252978 scopus 로고    scopus 로고
    • Mutagenesis of 16S rRNA C1409-G1491 base-pair differentiates between 6′OH and 6′NH3+ aminoglycosides
    • Pfister P., Hobbie S., Brull C., Corti N., Vasella A., Westhof E., and Bottger E.C. Mutagenesis of 16S rRNA C1409-G1491 base-pair differentiates between 6′OH and 6′NH3+ aminoglycosides. J. Mol. Biol. 346 (2005) 467-475
    • (2005) J. Mol. Biol. , vol.346 , pp. 467-475
    • Pfister, P.1    Hobbie, S.2    Brull, C.3    Corti, N.4    Vasella, A.5    Westhof, E.6    Bottger, E.C.7
  • 34
    • 0028856760 scopus 로고
    • Nonsense suppressor and antisuppressor mutations at the 1409-1491 base pair in the decoding region of Escherichia coli 16S rRNA
    • Gregory S.T., and Dahlberg A.E. Nonsense suppressor and antisuppressor mutations at the 1409-1491 base pair in the decoding region of Escherichia coli 16S rRNA. Nucleic Acids Res. 23 (1995) 4234-4238
    • (1995) Nucleic Acids Res. , vol.23 , pp. 4234-4238
    • Gregory, S.T.1    Dahlberg, A.E.2
  • 35
    • 0026322432 scopus 로고
    • Interaction between 16S ribosomal RNA and ribosomal protein S12: differential effects of paromomycin and streptomycin
    • O'Connor M., De Stasio E.A., and Dahlberg A.E. Interaction between 16S ribosomal RNA and ribosomal protein S12: differential effects of paromomycin and streptomycin. Biochimie 73 (1991) 1493-1500
    • (1991) Biochimie , vol.73 , pp. 1493-1500
    • O'Connor, M.1    De Stasio, E.A.2    Dahlberg, A.E.3
  • 36
    • 33746106088 scopus 로고    scopus 로고
    • Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2′-O-methylations in 16S and 23S rRNAs
    • Johansen S.K., Maus C.E., Plikaytis B.B., and Douthwaite S. Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2′-O-methylations in 16S and 23S rRNAs. Mol. Cell 23 (2006) 173-182
    • (2006) Mol. Cell , vol.23 , pp. 173-182
    • Johansen, S.K.1    Maus, C.E.2    Plikaytis, B.B.3    Douthwaite, S.4
  • 37
    • 0030802925 scopus 로고    scopus 로고
    • Molecular analysis of kanamycin and viomycin resistance in Mycobacterium smegmatis by use of the conjugation system
    • Taniguchi H., Chang B., Abe C., Nikaido Y., Mizuguchi Y., and Yoshida S.I. Molecular analysis of kanamycin and viomycin resistance in Mycobacterium smegmatis by use of the conjugation system. J. Bacteriol. 179 (1997) 4795-4801
    • (1997) J. Bacteriol. , vol.179 , pp. 4795-4801
    • Taniguchi, H.1    Chang, B.2    Abe, C.3    Nikaido, Y.4    Mizuguchi, Y.5    Yoshida, S.I.6
  • 38
    • 0032434688 scopus 로고    scopus 로고
    • A kirromycin-resistant EF-Tu species reverses streptomycin dependence of Escherichia coli strains mutated in ribosomal protein S12
    • Zuurmond A.M., Zeef L.A., and Kraal B. A kirromycin-resistant EF-Tu species reverses streptomycin dependence of Escherichia coli strains mutated in ribosomal protein S12. Microbiology 144 (1998) 3309-3316
    • (1998) Microbiology , vol.144 , pp. 3309-3316
    • Zuurmond, A.M.1    Zeef, L.A.2    Kraal, B.3
  • 39
    • 0025799516 scopus 로고
    • A single base substitution in 16S ribosomal RNA suppresses streptomycin dependence and increases the frequency of translational errors
    • Allen P.N., and Noller H.F. A single base substitution in 16S ribosomal RNA suppresses streptomycin dependence and increases the frequency of translational errors. Cell 66 (1991) 141-148
    • (1991) Cell , vol.66 , pp. 141-148
    • Allen, P.N.1    Noller, H.F.2
  • 40
    • 0025125057 scopus 로고
    • Effects of mutagenesis of C912 in the streptomycin binding region of Escherichia coli 16S ribosomal RNA
    • Frattali A.L., Flynn M.K., De Stasio E.A., and Dahlberg A.E. Effects of mutagenesis of C912 in the streptomycin binding region of Escherichia coli 16S ribosomal RNA. Biochim. Biophys. Acta 1050 (1990) 27-33
    • (1990) Biochim. Biophys. Acta , vol.1050 , pp. 27-33
    • Frattali, A.L.1    Flynn, M.K.2    De Stasio, E.A.3    Dahlberg, A.E.4
  • 41
    • 0024359387 scopus 로고
    • r-454) in the 15 S rRNA gene of the yeast Saccharomyces cerevisiae is involved in ribosomal frameshifting
    • r-454) in the 15 S rRNA gene of the yeast Saccharomyces cerevisiae is involved in ribosomal frameshifting. Mol. Gen. Genet. 217 (1989) 362-369
    • (1989) Mol. Gen. Genet. , vol.217 , pp. 362-369
    • Weiss-Brummer, B.1    Huttenhofer, A.2
  • 42
    • 0034699519 scopus 로고    scopus 로고
    • Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
    • Carter A.P., Clemons W.M., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., and Ramakrishnan V. Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics. Nature 407 (2000) 340-348
    • (2000) Nature , vol.407 , pp. 340-348
    • Carter, A.P.1    Clemons, W.M.2    Brodersen, D.E.3    Morgan-Warren, R.J.4    Wimberly, B.T.5    Ramakrishnan, V.6
  • 45
    • 0030806152 scopus 로고    scopus 로고
    • A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA
    • Lodmell J.S., and Dahlberg A.E. A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA. Science 277 (1997) 1262-1267
    • (1997) Science , vol.277 , pp. 1262-1267
    • Lodmell, J.S.1    Dahlberg, A.E.2
  • 47
    • 0346362326 scopus 로고    scopus 로고
    • Genetic evidence against the 16S ribosomal RNA helix 27 conformational switch model
    • Rodriguez-Correa D., and Dahlberg A.E. Genetic evidence against the 16S ribosomal RNA helix 27 conformational switch model. RNA 10 (2004) 28-33
    • (2004) RNA , vol.10 , pp. 28-33
    • Rodriguez-Correa, D.1    Dahlberg, A.E.2
  • 48
    • 0033862288 scopus 로고    scopus 로고
    • Mutations in helix 27 of the yeast Saccharomyces cerevisiae 18S rRNA affect the function of the decoding center of the ribosome
    • Velichutina I.V., Dresios J., Hong J.Y., Li C., Mankin A., Synetos D., and Liebman S.W. Mutations in helix 27 of the yeast Saccharomyces cerevisiae 18S rRNA affect the function of the decoding center of the ribosome. RNA 6 (2000) 1174-1184
    • (2000) RNA , vol.6 , pp. 1174-1184
    • Velichutina, I.V.1    Dresios, J.2    Hong, J.Y.3    Li, C.4    Mankin, A.5    Synetos, D.6    Liebman, S.W.7
  • 49
    • 33748184856 scopus 로고    scopus 로고
    • Biochemical characterization of the ribosomal decoding site
    • Noller H.F. Biochemical characterization of the ribosomal decoding site. Biochimie 88 (2006) 935-941
    • (2006) Biochimie , vol.88 , pp. 935-941
    • Noller, H.F.1


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