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Volumn 346, Issue 2, 2005, Pages 467-475

Mutagenesis of 16 S rRNA C1409-G1491 base-pair differentiates between 6′OH and 6′NH3+ aminoglycosides

Author keywords

aminoglycosides; mutagenesis; resistance; ribosome; structure

Indexed keywords

2 DEOXYSTREPTAMINE; AMINOGLYCOSIDE; AMINOGLYCOSIDE ANTIBIOTIC AGENT; AMMONIUM DERIVATIVE; ANTIBIOTIC G 418; GENTAMICIN; HYDROXYL GROUP; NEOMYCIN; PAROMOMYCIN; RNA; TOBRAMYCIN; ANTIINFECTIVE AGENT; HEXOSAMINE; RNA 16S; STREPTAMINE;

EID: 12544252978     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2004.11.073     Document Type: Article
Times cited : (59)

References (29)
  • 1
    • 0002751916 scopus 로고
    • Misreading of RNA codewords induced by aminoglycoside antibiotics
    • J. Davies, L. Gorini, and B.D. Davis Misreading of RNA codewords induced by aminoglycoside antibiotics Mol. Pharmacol. 1 1965 93 106
    • (1965) Mol. Pharmacol. , vol.1 , pp. 93-106
    • Davies, J.1    Gorini, L.2    Davis, B.D.3
  • 2
    • 0014429801 scopus 로고
    • Misreading of ribonucleic acid code words induced by aminoglycoside antibiotics. the effect of drug concentration
    • J. Davies, and B.D. Davis Misreading of ribonucleic acid code words induced by aminoglycoside antibiotics. The effect of drug concentration J. Biol. Chem. 243 1968 3312 3316
    • (1968) J. Biol. Chem. , vol.243 , pp. 3312-3316
    • Davies, J.1    Davis, B.D.2
  • 3
    • 0024375425 scopus 로고
    • The functional role of ribosomal RNA in protein synthesis
    • A.E. Dahlberg The functional role of ribosomal RNA in protein synthesis Cell 57 1989 525 529
    • (1989) Cell , vol.57 , pp. 525-529
    • Dahlberg, A.E.1
  • 4
    • 0023238983 scopus 로고
    • Interaction of antibiotics with functional sites in 16 S ribosomal RNA
    • D. Moazed, and H.F. Noller Interaction of antibiotics with functional sites in 16 S ribosomal RNA Nature 327 1987 389 394
    • (1987) Nature , vol.327 , pp. 389-394
    • Moazed, D.1    Noller, H.F.2
  • 5
    • 0024458904 scopus 로고
    • Intermediate states in the movement of transfer RNA in the ribosome
    • D. Moazed, and H.F. Noller Intermediate states in the movement of transfer RNA in the ribosome Nature 342 1989 142 148
    • (1989) Nature , vol.342 , pp. 142-148
    • Moazed, D.1    Noller, H.F.2
  • 6
    • 0025733603 scopus 로고
    • Ribosomal RNA and translation
    • H.F. Noller Ribosomal RNA and translation Annu. Rev. Biochem. 60 1991 191 227
    • (1991) Annu. Rev. Biochem. , vol.60 , pp. 191-227
    • Noller, H.F.1
  • 7
    • 0032571306 scopus 로고    scopus 로고
    • Binding of neomycin-class aminoglycoside antibiotics to the A-site of 16 S rRNA
    • D. Fourmy, M.I. Recht, and J.D. Puglisi Binding of neomycin-class aminoglycoside antibiotics to the A-site of 16 S rRNA J. Mol. Biol. 277 1998 347 362
    • (1998) J. Mol. Biol. , vol.277 , pp. 347-362
    • Fourmy, D.1    Recht, M.I.2    Puglisi, J.D.3
  • 8
    • 0029825658 scopus 로고    scopus 로고
    • Structure of the a site of Escherichia coli 16 S ribosomal RNA complexed with an aminoglycoside antibiotic
    • D. Fourmy, M.I. Recht, S.C. Blanchard, and J.D. Puglisi Structure of the A site of Escherichia coli 16 S ribosomal RNA complexed with an aminoglycoside antibiotic Science 274 1996 1367 1371
    • (1996) Science , vol.274 , pp. 1367-1371
    • Fourmy, D.1    Recht, M.I.2    Blanchard, S.C.3    Puglisi, J.D.4
  • 9
    • 0034699519 scopus 로고    scopus 로고
    • Functional insights from the structure of the 30 S ribosomal subunit and its interactions with antibiotics
    • A.P. Carter, W.M. Clemons, D.E. Brodersen, R.J. Morgan-Warren, B.T. Wimberly, and V. Ramakrishnan Functional insights from the structure of the 30 S ribosomal subunit and its interactions with antibiotics Nature 407 2000 340 348
    • (2000) Nature , vol.407 , pp. 340-348
    • Carter, A.P.1    Clemons, W.M.2    Brodersen, D.E.3    Morgan-Warren, R.J.4    Wimberly, B.T.5    Ramakrishnan, V.6
  • 10
    • 0034886697 scopus 로고    scopus 로고
    • Crystal structure of paromomycin docked into the eubacterial ribosomal decoding a site
    • Q. Vicens, and E. Westhof Crystal structure of paromomycin docked into the eubacterial ribosomal decoding A site Structure (Camb) 9 2001 647 658
    • (2001) Structure (Camb) , vol.9 , pp. 647-658
    • Vicens, Q.1    Westhof, E.2
  • 11
    • 0035986708 scopus 로고    scopus 로고
    • Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding A-site
    • Q. Vicens, and E. Westhof Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding A-site Chem. Biol. 9 2002 747 755
    • (2002) Chem. Biol. , vol.9 , pp. 747-755
    • Vicens, Q.1    Westhof, E.2
  • 12
    • 0037470560 scopus 로고    scopus 로고
    • Crystal structure of geneticin bound to a bacterial 16 S ribosomal RNA A-site oligonucleotide
    • Q. Vicens, and E. Westhof Crystal structure of geneticin bound to a bacterial 16 S ribosomal RNA A-site oligonucleotide J. Mol. Biol. 326 2003 1175 1188
    • (2003) J. Mol. Biol. , vol.326 , pp. 1175-1188
    • Vicens, Q.1    Westhof, E.2
  • 14
    • 0031802176 scopus 로고    scopus 로고
    • A single 16 S ribosomal RNA substitution is responsible for resistance to amikacin and other 2-deoxystreptamine aminoglycosides in Mycobacterium abscessus and Mycobacterium chelonae
    • T. Prammananan, P. Sander, B.A. Brown, K. Frischkorn, G.O. Onyi, and Y. Zhang A single 16 S ribosomal RNA substitution is responsible for resistance to amikacin and other 2-deoxystreptamine aminoglycosides in Mycobacterium abscessus and Mycobacterium chelonae J. Infect. Dis. 177 1998 1573 1581
    • (1998) J. Infect. Dis. , vol.177 , pp. 1573-1581
    • Prammananan, T.1    Sander, P.2    Brown, B.A.3    Frischkorn, K.4    Onyi, G.O.5    Zhang, Y.6
  • 15
    • 0032978275 scopus 로고    scopus 로고
    • RecA-mediated gene conversion and aminoglycoside resistance in strains heterozygous for rRNA
    • T. Prammananan, P. Sander, B. Springer, and E.C. Bottger RecA-mediated gene conversion and aminoglycoside resistance in strains heterozygous for rRNA Antimicrob. Agents Chemother. 43 1999 447 453
    • (1999) Antimicrob. Agents Chemother. , vol.43 , pp. 447-453
    • Prammananan, T.1    Sander, P.2    Springer, B.3    Bottger, E.C.4
  • 16
    • 0142075322 scopus 로고    scopus 로고
    • The molecular basis for A-site mutations conferring aminoglycoside resistance: Relationship between ribosomal susceptibility and X-ray crystal structures
    • P. Pfister, S. Hobbie, Q. Vicens, E.C. Bottger, and E. Westhof The molecular basis for A-site mutations conferring aminoglycoside resistance: relationship between ribosomal susceptibility and X-ray crystal structures ChemBioChem 4 2003 1078 1088
    • (2003) ChemBioChem , vol.4 , pp. 1078-1088
    • Pfister, P.1    Hobbie, S.2    Vicens, Q.3    Bottger, E.C.4    Westhof, E.5
  • 17
    • 0034878807 scopus 로고    scopus 로고
    • Aminoglycoside resistance with homogeneous and heterogeneous populations of antibiotic-resistant ribosomes
    • M.I. Recht, and J.D. Puglisi Aminoglycoside resistance with homogeneous and heterogeneous populations of antibiotic-resistant ribosomes Antimicrob. Agents Chemother. 45 2001 2414 2419
    • (2001) Antimicrob. Agents Chemother. , vol.45 , pp. 2414-2419
    • Recht, M.I.1    Puglisi, J.D.2
  • 18
    • 0024424033 scopus 로고
    • Mutations in 16 S ribosomal RNA disrupt antibiotic-RNA interactions
    • E.A. de Stasio, D. Moazed, H.F. Noller, and A.E. Dahlberg Mutations in 16 S ribosomal RNA disrupt antibiotic-RNA interactions Embo J. 8 1989 1213 1216
    • (1989) Embo J. , vol.8 , pp. 1213-1216
    • De Stasio, E.A.1    Moazed, D.2    Noller, H.F.3    Dahlberg, A.E.4
  • 19
    • 0025305692 scopus 로고
    • Effects of mutagenesis of a conserved base-paired site near the decoding region of Escherichia coli 16 S ribosomal RNA
    • E.A. de Stasio, and A.E. Dahlberg Effects of mutagenesis of a conserved base-paired site near the decoding region of Escherichia coli 16 S ribosomal RNA J. Mol. Biol. 212 1990 127 133
    • (1990) J. Mol. Biol. , vol.212 , pp. 127-133
    • De Stasio, E.A.1    Dahlberg, A.E.2
  • 20
    • 0028138280 scopus 로고
    • Interactions of a small RNA with antibiotic and RNA ligands of the 30 S subunit
    • P. Purohit, and S. Stern Interactions of a small RNA with antibiotic and RNA ligands of the 30 S subunit Nature 370 1994 659 662
    • (1994) Nature , vol.370 , pp. 659-662
    • Purohit, P.1    Stern, S.2
  • 21
    • 0032568576 scopus 로고    scopus 로고
    • RRNA chemical groups required for aminoglycoside binding
    • S.C. Blanchard, D. Fourmy, R.G. Eason, and J.D. Puglisi rRNA chemical groups required for aminoglycoside binding Biochemistry 37 1998 7716 7724
    • (1998) Biochemistry , vol.37 , pp. 7716-7724
    • Blanchard, S.C.1    Fourmy, D.2    Eason, R.G.3    Puglisi, J.D.4
  • 22
    • 1842388479 scopus 로고    scopus 로고
    • RNA sequence determinants for aminoglycoside binding to an A-site rRNA model oligonucleotide
    • M.I. Recht, D. Fourmy, S.C. Blanchard, K.D. Dahlquist, and J.D. Puglisi RNA sequence determinants for aminoglycoside binding to an A-site rRNA model oligonucleotide J. Mol. Biol. 262 1996 421 436
    • (1996) J. Mol. Biol. , vol.262 , pp. 421-436
    • Recht, M.I.1    Fourmy, D.2    Blanchard, S.C.3    Dahlquist, K.D.4    Puglisi, J.D.5
  • 23
    • 0032126750 scopus 로고    scopus 로고
    • Specificity of aminoglycoside antibiotics for the A-site of the decoding region of ribosomal RNA
    • C.H. Wong, M. Hendrix, E.S. Priestley, and W.A. Greenberg Specificity of aminoglycoside antibiotics for the A-site of the decoding region of ribosomal RNA Chem. Biol. 5 1998 397 406
    • (1998) Chem. Biol. , vol.5 , pp. 397-406
    • Wong, C.H.1    Hendrix, M.2    Priestley, E.S.3    Greenberg, W.A.4
  • 25
    • 0014956982 scopus 로고
    • Extreme lability of the C-8 proton: A consequence of 7-methylation of guanine residues in model compounds and in DNA and its analytical application
    • M. Tomasz Extreme lability of the C-8 proton: a consequence of 7-methylation of guanine residues in model compounds and in DNA and its analytical application Biochim. Biophys. Acta 199 1970 18 28
    • (1970) Biochim. Biophys. Acta , vol.199 , pp. 18-28
    • Tomasz, M.1
  • 26
    • 0035032997 scopus 로고    scopus 로고
    • Structural basis for selectivity and toxicity of ribosomal antibiotics
    • E.C. Bottger, B. Springer, T. Prammananan, Y. Kidan, and P. Sander Structural basis for selectivity and toxicity of ribosomal antibiotics EMBO Rep. 2 2001 318 323
    • (2001) EMBO Rep. , vol.2 , pp. 318-323
    • Bottger, E.C.1    Springer, B.2    Prammananan, T.3    Kidan, Y.4    Sander, P.5
  • 27
    • 0029800114 scopus 로고    scopus 로고
    • Introducing mutations into a chromosomal rRNA gene using a genetically modified eubacterial host with a single rRNA operon
    • P. Sander, T. Prammananan, and E.C. Bottger Introducing mutations into a chromosomal rRNA gene using a genetically modified eubacterial host with a single rRNA operon Mol. Microbiol. 22 1996 841 848
    • (1996) Mol. Microbiol. , vol.22 , pp. 841-848
    • Sander, P.1    Prammananan, T.2    Bottger, E.C.3
  • 29
    • 0037251969 scopus 로고    scopus 로고
    • The ribosomal database project (RDP-II): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
    • J.R. Cole, B. Chai, T.L. Marsh, R.J. Farris, Q. Wang, and S.A. Kulum The ribosomal database project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy Nucl. Acids Res. 31 2003 442 442
    • (2003) Nucl. Acids Res. , vol.31 , pp. 442-442
    • Cole, J.R.1    Chai, B.2    Marsh, T.L.3    Farris, R.J.4    Wang, Q.5    Kulum, S.A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.