메뉴 건너뛰기




Volumn 43, Issue 6, 2005, Pages 837-848

Cloning and characterization of micro-RNAs from moss

Author keywords

Auxin; Micro RNA; Moss; Physcomitrella patens; Protonema; Small RNA

Indexed keywords

GENES; PLANTS (BOTANY);

EID: 32944464673     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2005.02499.x     Document Type: Article
Times cited : (215)

References (44)
  • 1
    • 17444430392 scopus 로고    scopus 로고
    • MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
    • -279
    • Allen E. Xie Z. Gustafson A.M. Carrington J.C. ( 2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell, 121, 207 221 279.
    • (2005) Cell , vol.121 , pp. 207-221
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Carrington, J.C.4
  • 2
    • 0017404566 scopus 로고
    • The isolation and preliminary characterization of auxotrophic and analogue resistant mutants in the moss Physcomitrella patens
    • Ashton N.W. Cove D.J. ( 1977) The isolation and preliminary characterization of auxotrophic and analogue resistant mutants in the moss Physcomitrella patens. Mol. Gen. Genet. 154, 87 95.
    • (1977) Mol. Gen. Genet. , vol.154 , pp. 87-95
    • Ashton, N.W.1    Cove, D.J.2
  • 3
    • 0001383199 scopus 로고
    • Analysis of gametophytic development in the moss Physcomitrella patens using auxin and cytokinin resistant mutants
    • Ashton N.W. Grimsley N.H. Cove D.J. ( 1979) Analysis of gametophytic development in the moss Physcomitrella patens using auxin and cytokinin resistant mutants. Planta, 144, 427 435.
    • (1979) Planta , vol.144 , pp. 427-435
    • Ashton, N.W.1    Grimsley, N.H.2    Cove, D.J.3
  • 4
    • 0242361521 scopus 로고    scopus 로고
    • Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes
    • Aukerman M.J. Sakai H. ( 2003) Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes. Plant Cell, 15, 2730 2741.
    • (2003) Plant Cell , vol.15 , pp. 2730-2741
    • Aukerman, M.J.1    Sakai, H.2
  • 5
    • 22144457368 scopus 로고    scopus 로고
    • Antiquity of microRNAs and their targets in land plants
    • Axtell M.J. Bartel D.P. ( 2005) Antiquity of microRNAs and their targets in land plants. Plant Cell, 17, 1658 1673.
    • (2005) Plant Cell , vol.17 , pp. 1658-1673
    • Axtell, M.J.1    Bartel, D.P.2
  • 6
    • 0037782493 scopus 로고    scopus 로고
    • MicroRNAs: At the root of plant development?
    • Bartel B. Bartel D.P. ( 2003) MicroRNAs: at the root of plant development? Plant Physiol. 132, 709 717.
    • (2003) Plant Physiol. , vol.132 , pp. 709-717
    • Bartel, B.1    Bartel, D.P.2
  • 7
    • 4644242349 scopus 로고    scopus 로고
    • RNA silencing in plants
    • Baulcombe D. ( 2004) RNA silencing in plants. Nature, 431, 356 363.
    • (2004) Nature , vol.431 , pp. 356-363
    • Baulcombe, D.1
  • 8
    • 10244243802 scopus 로고    scopus 로고
    • Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences
    • Bonnet E. Wuyts J. Rouze P. Van de Peer Y. ( 2004) Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences. Bioinformatics, 20, 2911 2917.
    • (2004) Bioinformatics , vol.20 , pp. 2911-2917
    • Bonnet, E.1    Wuyts, J.2    Rouze, P.3    Van De Peer, Y.4
  • 9
    • 0037718347 scopus 로고    scopus 로고
    • Arabidopsis HEN1: A genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance
    • Boutet S. Vazquez F. Liu J. Beclin C. Fagard M. Gratias A. Morel J.B. Crete P. Chen X. Vaucheret H. ( 2003) Arabidopsis HEN1: a genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance. Curr. Biol. 13, 843 848.
    • (2003) Curr. Biol. , vol.13 , pp. 843-848
    • Boutet, S.1    Vazquez, F.2    Liu, J.3    Beclin, C.4    Fagard, M.5    Gratias, A.6    Morel, J.B.7    Crete, P.8    Chen, X.9    Vaucheret, H.10
  • 10
    • 1642366133 scopus 로고    scopus 로고
    • A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development
    • Chen X. ( 2004) A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development. Science, 303, 2022 2025.
    • (2004) Science , vol.303 , pp. 2022-2025
    • Chen, X.1
  • 11
    • 2442604466 scopus 로고    scopus 로고
    • Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression
    • Chen J. Li W.X. Xie D. Peng J.R. Ding S.W. ( 2004) Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression. Plant Cell, 16, 1302 1313.
    • (2004) Plant Cell , vol.16 , pp. 1302-1313
    • Chen, J.1    Li, W.X.2    Xie, D.3    Peng, J.R.4    Ding, S.W.5
  • 12
    • 0034436041 scopus 로고    scopus 로고
    • The moss Physcomitrella patens
    • Cove D. ( 2000) The moss Physcomitrella patens. J. Plant Growth Regul. 19, 275 283.
    • (2000) J. Plant Growth Regul. , vol.19 , pp. 275-283
    • Cove, D.1
  • 14
    • 0031438685 scopus 로고    scopus 로고
    • Searching for patterns in genomic data
    • Dsouza M. Larsen N. Overbeek R. ( 1997) Searching for patterns in genomic data. Trends Genet. 13, 497 498.
    • (1997) Trends Genet. , vol.13 , pp. 497-498
    • Dsouza, M.1    Larsen, N.2    Overbeek, R.3
  • 15
    • 1842484780 scopus 로고    scopus 로고
    • Gene regulation: Ancient microRNA target sequences in plants
    • Floyd S.K. Bowman J.L. ( 2004) Gene regulation: ancient microRNA target sequences in plants. Nature, 428, 485 486.
    • (2004) Nature , vol.428 , pp. 485-486
    • Floyd, S.K.1    Bowman, J.L.2
  • 16
    • 24944510549 scopus 로고    scopus 로고
    • MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for Arabidopsis lateral root development
    • Guo H.S. Xie Q. Fei J.F. Chua N.H. ( 2005) MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for Arabidopsis lateral root development. Plant Cell, 17, 1376 1386.
    • (2005) Plant Cell , vol.17 , pp. 1376-1386
    • Guo, H.S.1    Xie, Q.2    Fei, J.F.3    Chua, N.H.4
  • 17
    • 0015861258 scopus 로고
    • Auxin regulation of caulonemal formation in moss protonema
    • Johri M.M. Desai S. 1973) Auxin regulation of caulonemal formation in moss protonema. New Biol. 245, 223 224.
    • (1973) New Biol. , vol.245 , pp. 223-224
    • Johri, M.M.1    Desai, S.2
  • 18
    • 0037320231 scopus 로고    scopus 로고
    • P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA function
    • Kasschau K.D. Xie Z. Allen E. Llave C. Chapman E.J. Krizan K.A. Carrington J.C. ( 2003) P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA function. Dev. Cell, 4, 205 217.
    • (2003) Dev. Cell , vol.4 , pp. 205-217
    • Kasschau, K.D.1    Xie, Z.2    Allen, E.3    Llave, C.4    Chapman, E.J.5    Krizan, K.A.6    Carrington, J.C.7
  • 20
    • 4344637081 scopus 로고    scopus 로고
    • Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions
    • Kurihara Y. Watanabe Y. ( 2004) Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions. Proc. Natl Acad. Sci. USA, 101, 12753 12758.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 12753-12758
    • Kurihara, Y.1    Watanabe, Y.2
  • 21
    • 0035984059 scopus 로고    scopus 로고
    • Endogenous and silencing-associated small RNAs in plants
    • Llave C. Kasschau K.D. Rector M.A. Carrington J.C. ( 2002a) Endogenous and silencing-associated small RNAs in plants. Plant Cell, 14, 1605 1619.
    • (2002) Plant Cell , vol.14 , pp. 1605-1619
    • Llave, C.1    Kasschau, K.D.2    Rector, M.A.3    Carrington, J.C.4
  • 22
    • 0037144457 scopus 로고    scopus 로고
    • Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
    • Llave C. Xie Z. Kasschau K.D. Carrington J.C. ( 2002b) Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science, 297, 2053 2056.
    • (2002) Science , vol.297 , pp. 2053-2056
    • Llave, C.1    Xie, Z.2    Kasschau, K.D.3    Carrington, J.C.4
  • 23
    • 2942697259 scopus 로고    scopus 로고
    • MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs
    • Mallory A.C. Dugas D.V. Bartel D.P. Bartel B. ( 2004) MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Curr. Biol. 14, 1035 1046.
    • (2004) Curr. Biol. , vol.14 , pp. 1035-1046
    • Mallory, A.C.1    Dugas, D.V.2    Bartel, D.P.3    Bartel, B.4
  • 24
    • 0000724351 scopus 로고
    • Tertiary and quarternary fossils
    • In. Schuster, R.M., ed.). Miyazaki-ken, Japan: Hattori Botanical Laboratory, pp.
    • Miller N.D. ( 1984) Tertiary and quarternary fossils. In New Manual of Bryology ( Schuster R.M., ed.) Miyazaki-ken, Japan : Hattori Botanical Laboratory, pp. 1194 1232 Coen E. ( 2003) Genetic control of surface curvature. Science, 299, 1404 1407.
    • (1984) New Manual of Bryology , vol.299 , pp. 1194-1232
    • Miller, N.D.1    Coen, E.2
  • 26
    • 4644286235 scopus 로고    scopus 로고
    • SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
    • Peragine A. Yoshikawa M. Wu G. Albrecht H.L. Poethig R.S. ( 2004) SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev. 18, 2368 2379.
    • (2004) Genes Dev. , vol.18 , pp. 2368-2379
    • Peragine, A.1    Yoshikawa, M.2    Wu, G.3    Albrecht, H.L.4    Poethig, R.S.5
  • 29
    • 0031930234 scopus 로고    scopus 로고
    • Development, genetics and molecular biology of mosses
    • Reski R. ( 1998) Development, genetics and molecular biology of mosses. Bot. Acta, 111, 1 15.
    • (1998) Bot. Acta , vol.111 , pp. 1-15
    • Reski, R.1
  • 31
    • 0034671865 scopus 로고    scopus 로고
    • Arabidopsis transcription factors: Genome-wide comparative analysis among eukaryotes
    • Riechmann J.L. Heard J. Martin G., et al. ( 2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science, 290, 2105 2110.
    • (2000) Science , vol.290 , pp. 2105-2110
    • Riechmann, J.L.1    Heard, J.2    Martin, G.3
  • 32
    • 0000778479 scopus 로고
    • Efficient gene targeting in the moss Physcomitrella patens
    • 2nd edn. Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory Press
    • Sambrook J. Fritsch E.F. Maniatis T. ( 1989) Molecular Cloning, A Laboratory Manual, 2nd edn. Cold Spring Harbor, NY, USA : Cold Spring Harbor Laboratory Press Zryd J.P. ( 1997) Efficient gene targeting in the moss Physcomitrella patens. Plant J. 11, 1195 1206.
    • (1989) Molecular Cloning, a Laboratory Manual , vol.11 , pp. 1195-1206
    • Sambrook, J.1    Fritsch, E.F.2    Maniatis, T.3    Zryd, J.P.4
  • 33
    • 85047684536 scopus 로고    scopus 로고
    • The moss Physcomitrella patens, now and then
    • Schaefer D.G. Zryd J.P. ( 2001) The moss Physcomitrella patens, now and then. Plant Physiol. 127, 1430 1438.
    • (2001) Plant Physiol. , vol.127 , pp. 1430-1438
    • Schaefer, D.G.1    Zryd, J.P.2
  • 34
    • 0036834508 scopus 로고    scopus 로고
    • DICER-LIKE1: Blind men and elephants in Arabidopsis development
    • Schauer S.E. Jacobsen S.E. Meinke D.W. Ray A. ( 2002) DICER-LIKE1: blind men and elephants in Arabidopsis development. Trends Plant Sci. 7, 487 491.
    • (2002) Trends Plant Sci. , vol.7 , pp. 487-491
    • Schauer, S.E.1    Jacobsen, S.E.2    Meinke, D.W.3    Ray, A.4
  • 36
    • 0344875209 scopus 로고    scopus 로고
    • Complete chloroplast DNA sequence of the moss Physcomitrella patens: Evidence for the loss and relocation of rpoA from the chloroplast to the nucleus
    • Sugiura C. Kobayashi Y. Aoki S. Sugita C. Sugita M. ( 2003) Complete chloroplast DNA sequence of the moss Physcomitrella patens: evidence for the loss and relocation of rpoA from the chloroplast to the nucleus. Nucleic Acids Res. 31, 5324 5331.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 5324-5331
    • Sugiura, C.1    Kobayashi, Y.2    Aoki, S.3    Sugita, C.4    Sugita, M.5
  • 37
    • 4043074968 scopus 로고    scopus 로고
    • Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
    • Sunkar R. Zhu J.K. ( 2004) Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell, 16, 2001 2019.
    • (2004) Plant Cell , vol.16 , pp. 2001-2019
    • Sunkar, R.1    Zhu, J.K.2
  • 38
  • 39
    • 0027968068 scopus 로고
    • Clustalw: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D. Higgins D.G. Gibson T.J. ( 1994) clustalw: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673 4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 44
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. ( 2003) mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31, 3406 3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.