Critical role of the p400/mDomino chromatin-remodeling ATPase in embryonic hematopoiesis

Genes to Cells

Volumn 12, Issue 5, 2007, Pages 581-592

  Ueda, Takeshi ^a,b   Watanabe fukunaga, Rie ^a,b   Ogawa, Hironori ^a,b   Fukuyama, Hidehiro ^a   Higashi, Yujiro ^a   Nagata, Shigekazu ^a,b   Fukunaga, Rikiro ^a,b  

^a OSAKA UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE; DNA; FORKHEAD TRANSCRIPTION FACTOR; GLOBIN; HISTONE; HOX PROTEIN; TRANSCRIPTION FACTOR HOXA7; TRANSCRIPTION FACTOR HOXA9; TRANSCRIPTION FACTOR HOXB9; TRANSCRIPTION FACTOR SNF; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN;

AMINO TERMINAL SEQUENCE; ANEMIA; ANIMAL CELL; ARTICLE; CHROMATIN ASSEMBLY AND DISASSEMBLY; CHROMATIN STRUCTURE; CONTROLLED STUDY; DEATH; DNA MICROARRAY; EMBRYO; EMBRYO DEVELOPMENT; ERYTHROPOIESIS; GENE CLUSTER; GENE DELETION; GENE EXPRESSION; GENE EXPRESSION REGULATION; HEMATOPOIESIS; MAMMAL; MOUSE; NEURAL TUBE DEFECT; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FUNCTION; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; YOLK SAC;

ADENOSINE TRIPHOSPHATASES; ANIMALS; BASE SEQUENCE; CHROMATIN ASSEMBLY AND DISASSEMBLY; DNA PRIMERS; ERYTHROPOIESIS; FEMALE; FETAL DEVELOPMENT; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, HOMEOBOX; HEMATOPOIESIS; IN SITU HYBRIDIZATION; MALE; MICE; MICE, INBRED ICR; MICE, KNOCKOUT; MICE, MUTANT STRAINS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PREGNANCY; PROTEIN STRUCTURE, TERTIARY; TRANSCRIPTION FACTORS; YOLK SAC;

MAMMALIA; MUS;

EID: 34249705678     PISSN: 13569597     EISSN: 13652443     Source Type: Journal    
DOI: 10.1111/j.1365-2443.2007.01080.x     Document Type: Article

References (56)

1. Akasaka, T., van Lohuizen, M., van der Lugt, N., Mizutani-Koseki, Y., Kanno, M., Taniguchi, M., Vidal, M., Alkema, M., Berns, A. & Koseki, H. (2001) Mice doubly deficient for the Polycomb Group genes Mel18 and Bmi1 reveal synergy and requirement for maintenance but not initiation of Hox gene expression. Development 128, 1587-1597.
2. van Attikum, H. & Gasser, S.M. (2005) The histone code at DNA breaks: A guide to repair? Nat. Rev. Mol. Cell Biol. 6, 757-765.
3. Ayton, P.M. & Cleary, M.L. (2003) Transformation of myeloid progenitors by MLL oncoproteins is dependent on Hoxa7 and Hoxa9. Genes Dev. 17, 2298-2307.
4. Braun, A., Hoffmann, J.A. & Meister, M. (1998) Analysis of the Drosophila host defense in domino mutant larvae, which are devoid of hemocytes. Proc. Natl. Acad. Sci. USA 95, 14337-14342.
5. Braun, A., Lemaitre, B., Lanot, R., Zachary, D. & Meister, M. (1997) Drosophila immunity: Analysis of larval hemocytes by P-element-mediated enhancer trap. Genetics 147, 623-634.
6. Bultman, S.J., Gebuhr, T.C. & Magnuson, T. (2005) A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in β-globin expression and erythroid development. Genes Dev. 19, 2849-2861.
7. Bultman, S., Gebuhr, T., Yee, D., La Mantia, C., Nicholson, J., Gilliam, A., Randazzo, F., Metzger, D., Chambon, P., Crabtree, G. & Magnuson, T. (2000) A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes. Mol. Cell 6, 1287-1295.
8. Cai, Y., Jin, J., Florens, L., Swanson, S.K., Kusch, T., Li, B., Workman, J.L., Washburn, M.P., Conaway, R.C. & Conaway, J.W. (2005) The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes. J. Biol. Chem. 280, 13665-13670.
9. Cairns, B.R. (2005) Chromatin remodeling complexes: Strength in diversity, precision through specialization. Curr. Opin. Genet. Dev. 15, 185-190.
10. Cao, R., Tsukada, Y. & Zhang, Y. (2005) Role of Bmi-1 and Ring1A in H2A ubiquitylation and Hox gene silencing. Mol. Cell 20, 845-854.
11. Ceol, C.J. & Horvitz, H.R. (2004) A new class of C. elegans synMuv genes implicates a Tip60/NuA4-like HAT complex as a negative regulator of Ras signaling. Dev. Cell 6, 563-576.
12. Chan, H.M., Narita, M., Lowe, S.W. & Livingston, D.M. (2005) The p400 E1A-associated protein is a novel component of the p53 → p21 senescence pathway. Genes Dev. 19, 196-201.
13. Doyon, Y. & Cote, J. (2004) The highly conserved and multifunctional NuA4 HAT complex. Curr. Opin. Genet. Dev. 14, 147-154.
14. Dzierzak, E., Medvinsky, A. & de Bruijn, M. (1998) Qualitative and quantitative aspects of haematopoietic cell development in the mammalian embryo. Immunol. Today 19, 228-236.
15. Eissenberg, J.C., Wong, M. & Chrivia, J.C. (2005) Human SRCAP and Drosophila melanogaster DOM are homologs that function in the notch signaling pathway. Mol. Cell. Biol. 25, 6559-6569.
16. Ernst, P., Mabon, M., Davidson, A.J., Zon, L.I. & Korsmeyer, S.J. (2004) An Mll-dependent Hox program drives hematopoietic progenitor expansion. Curr. Biol. 14, 2063-2069.
17. Fantoni, A., Farace, M.G. & Gambari, R. (1981) Embryonic hemoglobins in man and other mammals. Blood 57, 623-633.
18. Frank, S.R., Parisi, T., Taubert, S., Fernandez, P., Fuchs, M., Chan, H.M., Livingston, D.M. & Amati, B. (2003) MYC recruits the TIP60 histone acetyltransferase complex to chromatin. EMBO Rep. 4, 575-580.
19. Fuchs, M., Gerber, J., Drapkin, R., Sif, S., Ikura, T., Ogryzko, V., Lane, W.S., Nakatani, Y. & Livingston, D.M. (2001) The p400 complex is an essential E1A transformation target. Cell 106, 297-307.
20. Grinberg, I. & Millen, K.J. (2005) The ZIC gene family in development and disease. Clin. Genet. 67, 290-296.
21. Hanson, R.D., Hess, J.L., Yu, B.D., Ernst, P., van Lohuizen, M., Berns, A., van der Lugt, N.M., Shashikant, C.S., Ruddle, F.H., Seto, M. & Korsmeyer, S.J. (1999) Mammalian trithorax and polycomb-group homologues are antagonistic regulators of homeotic development. Proc. Natl. Acad. Sci. USA 96, 14372-14377.
22. Herrera, E., Marcus, R., Li, S., Williams, S.E., Erskine, L., Lai, E. & Mason, C. (2004) Foxd1 is required for proper formation of the optic chiasm. Development 131, 5727-5739.
23. Hess, J.L., Yu, B.D., Li, B., Hanson, R. & Korsmeyer, S.J. (1997) Defects in yolk sac hematopoiesis in Mll-null embryos. Blood 90, 1799-1806.
24. Iida, S., Kohro, T., Kodama, T., Nagata, S. & Fukunaga, R. (2005) Identification of CCR2, flotillin, and gp49B genes as new G-CSF targets during neutrophilic differentiation. J. Leukoc. Biol. 78, 481-490.
25. Iwama, A., Oguro, H., Negishi, M., Kato, Y., Morita, Y., Tsukui, H., Ema, H., Kamijo, T., Katoh-Fukui, Y., Koseki, H., van Lohuizen, M. & Nakauchi, H. (2004) Enhanced self-renewal of hematopoietic stem cells mediated by the polycomb gene product Bmi-1. Immunity 21, 843-851.
26. Jin, J., Cai, Y., Li, B., Conaway, R.C., Workman, J.L., Conaway, J.W. & Kusch, T. (2005) In and out: Histone variant exchange in chromatin. Trends Biochem. Sci. 30, 680-687.
27. Kihm, A.J., Kong, Y., Hong, W., Russell, J.E., Rouda, S., Adachi, K., Simon, M.C., Blobel, G.A. & Weiss, M.J. (2002) An abundant erythroid protein that stabilizes free α-haemoglobin. Nature 417, 758-763.
28. Kim, J.Y., Sawada, A., Tokimasa, S., Endo, H., Ozono, K., Hara, J. & Takihara, Y. (2004) Defective long-term repopulating ability in hematopoietic stem cells lacking the Polycomb-group gene rae28. Eur. J. Haematol. 73, 75-84.
29. Kobor, M.S., Venkatasubrahmanyam, S., Meneghini, M.D., Gin, J.W., Jennings, J.L., Link, A.J., Madhani, H.D. & Rine, J. (2004) A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. PLOS Biol. 2, 587-599.
30. Krogan, N.J., Baetz, K., Keogh, M.C., et al. (2004) Regulation of chromosome stability by the histone H2A variant Htz1, the Swr1 chromatin remodeling complex, and the histone acetyltransferase NuA4. Proc. Natl. Acad. Sci. USA 101, 13513-13518.
31. Krogan, N.J., Keogh, M.C., Datta, N., et al. (2003) A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1. Mol. Cell 12, 1565-1576.
32. Kusch, T., Florens, L., Macdonald, W.H., Swanson, S.K., Glaser, R.L., Yates, J.R., 3rd, Abmayr, S.M., Washburn, M.P. & Workman, J.L. (2004) Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions. Science 306, 2084-2087.
33. Lessard, J. & Sauvageau, G. (2003) Bmi-1 determines the proliferative capacity of normal and leukaemic stem cells. Nature 423, 255-260.
34. van der Lugt, N.M., Domen, J., Linders, K., van Roon, M., Robanus-Maandag, E., te Riele, H., van der Valk, M., Deschamps, J., Sofroniew, M., van Lohuizen, M. & Berns, A. (1994) Posterior transformation, neurological abnormalities, and severe hematopoietic defects in mice with a targeted deletion of the bmi-1 proto-oncogene. Genes Dev. 8, 757-769.
35. Martin, C. & Zhang, Y. (2005) The diverse functions of histone lysine methylation. Nat. Rev. Mol. Cell Biol. 6, 838-849.
36. Maruhashi, M., Van De Putte, T., Huylebroeck, D., Kondoh, H. & Higashi, Y. (2005) Involvement of SIP1 in positioning of somite boundaries in the mouse embryo. Dev. Dyn. 234, 332-338.
37. Milne, T.A., Dou, Y., Martin, M.E., Brock, H.W., Roeder, R.G. & Hess, J.L. (2005) MLL associates specifically with a subset of transcriptionally active target genes. Proc. Natl. Acad. Sci. USA 102, 14765-14770.
38. Miwa, Y., Atsumi, T., Imai, N. & Ikawa, Y. (1991) Primitive erythropoiesis of mouse teratocarcinoma stem cells PCC3/A/1 in serum-free medium. Development 111, 543-549.
39. Mizuguchi, G., Shen, X., Landry, J., Wu, W.H., Sen, S. & Wu, C. (2004) ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex. Science 303, 343-348.
40. Ogawa, H., Murayama, A., Nagata, S. & Fukunaga, R. (2003a) Regulation of myeloid zinc finger protein 2A transactivation activity through phosphorylation by mitogen-activated protein kinases. J. Biol. Chem. 278, 2921-2927.
41. Ogawa, H., Ueda, T., Aoyama, T., Aronheim, A., Nagata, S. & Fukunaga, R. (2003b) A SWI2/SNF2-type ATPase/helicase protein, mDomino, interacts with myeloid zinc finger protein 2A (MZF-2A) to regulate its transcriptional activity. Genes Cells 8, 325-339.
42. Ohta, H., Sawada, A., Kim, J.Y., Tokimasa, S., Nishiguchi, S., Humphries, R.K., Hara, J. & Takihara, Y. (2002) Polycomb group gene rae28 is required for sustaining activity of hematopoietic stem cells. J. Exp. Med. 195, 759-770.
43. Park, I.K., Qian, D., Kiel, M., Becker, M.W., Pihalja, M., Weissman, I.L., Morrison, S.J. & Clarke, M.F. (2003) Bmi-1 is required for maintenance of adult self-renewing haematopoietic stem cells. Nature 423, 302-305.
44. Ruhf, M.L., Braun, A., Papoulas, O., Tamkun, J.W., Randsholt, N. & Meister, M. (2001) The domino gene of Drosophila encodes novel members of the SWI2/SNF2 family of DNA-dependent ATPases, which contribute to the silencing of homeotic genes. Development 128, 1429-1441.
45. Ruhl, D.D., Jin, J., Cai, Y., Swanson, S., Florens, L., Washburn, M.P., Conaway, R.C., Conaway, J.W. & Chrivia, J.C. (2006) Purification of a human SRCAP complex that remodels chromatin by incorporating the histone variant H2A.Z into nucleosomes. Biochemistry 45, 5671-5677.
46. Saha, A., Wittmeyer, J. & Cairns, B.R. (2006) Chromatin remodelling: the industrial revolution of DNA around histones. Nat. Rev. Mol. Cell Biol. 7, 437-447.
47. Samuelson, A.V., Narita, M., Chan, H.M., Jin, J., de Stanchina, E., McCurrach, M.E., Narita, M., Fuchs, M., Livingston, D.M. & Lowe, S.W. (2005) p400 is required for E1A to promote apoptosis. J. Biol. Chem. 280, 21915-21923.
48. Sarma, K. & Reinberg, D. (2005) Histone variants meet their match. Nat. Rev. Mol. Cell Biol. 6, 139-149.
49. de la Serna, I.L., Ohkawa, Y. & Imbalzano, A.N. (2006) Chromatin remodelling in mammalian differentiation: Lessons from ATP-dependent remodellers. Nat. Rev. Genet. 7, 461-473.
50. Stopka, T. & Skoultchi, A.I. (2003) The ISWI ATPase Snf2h is required for early mouse development. Proc. Natl. Acad. Sci. USA 100, 14097-14102.
51. Taubert, S., Gorrini, C., Frank, S.R., Parisi, T., Fuchs, M., Chan, H.M., Livingston, D.M. & Amati, B. (2004) E2F-dependent histone acetylation and recruitment of the Tip60 acetyltransferase complex to chromatin in late G1. Mol. Cell. Biol. 24, 4546-4556.
52. Tyteca, S., Vandromme, M., Legube, G., Chevillard-Briet, M. & Trouche, D. (2006) Tip60 and p400 are both required for UV-induced apoptosis but play antagonistic roles in cell cycle progression. EMBO J. 25, 1680-1689.
53. Ueda, T., Watanabe-Fukunaga, R., Fukuyama, H., Nagata, S. & Fukunaga, R. (2004) Mnk2 and Mnk1 are essential for constitutive and inducible phosphorylation of eukaryotic initiation factor 4E but not for cell growth or development. Mol. Cell. Biol. 24, 6539-6549.
54. Worthington, R.E., Bossie-Codreanu, J. & Van Zant, G. (1987) Quantitation of erythroid differentiation in vitro using a sensitive colorimetric assay for hemoglobin. Exp. Hematol. 15, 85-92.
55. Xu, C., Liguori, G., Persico, M.G. & Adamson, E.D. (1999) Abrogation of the Cripto gene in mouse leads to failure of postgastrulation morphogenesis and lack of differentiation of cardiomyocytes. Development 126, 483-494.
56. Yu, B.D., Hanson, R.D., Hess, J.L., Horning, S.E. & Korsmeyer, S.J. (1998) MLL, a mammalian trithorax-group gene, functions as a transcriptional maintenance factor in morphogenesis. Proc. Natl. Acad. Sci. USA 95, 10632-10636.