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Volumn 42, Issue 5, 2007, Pages 664-674

Characterization of antimicrobial histone sequences and posttranslational modifications by mass spectrometry

Author keywords

Histone; MALDI MS MS; Mass spectrometry; Propionic anhydride; Shrimp

Indexed keywords

ANTIBIOTICS; MASS SPECTROMETRY; METHYLATION; PHOSPHORYLATION; SYNTHESIS (CHEMICAL); TRANSCRIPTION;

EID: 34249286274     PISSN: 10765174     EISSN: 10969888     Source Type: Journal    
DOI: 10.1002/jms.1200     Document Type: Article
Times cited : (24)

References (54)
  • 2
    • 0033529565 scopus 로고    scopus 로고
    • Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome
    • Kornberg RD, Lorch Y. Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome. Cell 1999; 98: 285.
    • (1999) Cell , vol.98 , pp. 285
    • Kornberg, R.D.1    Lorch, Y.2
  • 3
    • 0035839136 scopus 로고    scopus 로고
    • Translating the histone code
    • Jenuwein T, Allis CD. Translating the histone code. Science 2001; 293: 1074.
    • (2001) Science , vol.293 , pp. 1074
    • Jenuwein, T.1    Allis, C.D.2
  • 4
    • 0034610814 scopus 로고    scopus 로고
    • The language of covalent histone modifications
    • Strahl BD, Allis CD. The language of covalent histone modifications. Nature 2000; 403: 41.
    • (2000) Nature , vol.403 , pp. 41
    • Strahl, B.D.1    Allis, C.D.2
  • 5
    • 0036532026 scopus 로고    scopus 로고
    • Histone modifications in transcriptional regulation
    • Berger SL. Histone modifications in transcriptional regulation. Curr. Opin. Genet. Dev. 2002; 12: 142.
    • (2002) Curr. Opin. Genet. Dev , vol.12 , pp. 142
    • Berger, S.L.1
  • 7
    • 0036850346 scopus 로고    scopus 로고
    • Deciphering the transcriptional histone acetylation code for a human gene
    • Agalioti T, Chen G, Thanos D. Deciphering the transcriptional histone acetylation code for a human gene. Cell 2002; 111: 381.
    • (2002) Cell , vol.111 , pp. 381
    • Agalioti, T.1    Chen, G.2    Thanos, D.3
  • 8
    • 0036591878 scopus 로고    scopus 로고
    • The many faces of histone lysine methylation
    • Lachner M, Jenuwein T. The many faces of histone lysine methylation. Curr. Opin. Cell Biol. 2002; 14: 286.
    • (2002) Curr. Opin. Cell Biol , vol.14 , pp. 286
    • Lachner, M.1    Jenuwein, T.2
  • 12
    • 0031838588 scopus 로고    scopus 로고
    • Antimicrobial activity in the skin of the channel catfish Ictalurus punctatus: Characterization of broad-spectrum histone-like antimicrobial proteins
    • Robinette D, Wada S, Arroll T, Levy MG, Miller WL, Noga EJ. Antimicrobial activity in the skin of the channel catfish Ictalurus punctatus: characterization of broad-spectrum histone-like antimicrobial proteins. Cell. Mol. Life Sci. 1998; 54: 467.
    • (1998) Cell. Mol. Life Sci , vol.54 , pp. 467
    • Robinette, D.1    Wada, S.2    Arroll, T.3    Levy, M.G.4    Miller, W.L.5    Noga, E.J.6
  • 13
    • 0034665099 scopus 로고    scopus 로고
    • Pepsin-mediated processing of the cytoplasmic histone H2A to strong antimicrobial peptide buforin I
    • Kim HS, Yoon H, Minn I, Park CB, Lee WT, Zasloff M, Kim SC. Pepsin-mediated processing of the cytoplasmic histone H2A to strong antimicrobial peptide buforin I. J. Immunol. 2000; 165: 3268.
    • (2000) J. Immunol , vol.165 , pp. 3268
    • Kim, H.S.1    Yoon, H.2    Minn, I.3    Park, C.B.4    Lee, W.T.5    Zasloff, M.6    Kim, S.C.7
  • 14
    • 2242429813 scopus 로고    scopus 로고
    • Anti-microbial properties of histone H2A from skin secretions of rainbow trout, Oncorhynchus mykiss
    • Fernandes JM, Kemp GD, Molle MG, Smith VJ. Anti-microbial properties of histone H2A from skin secretions of rainbow trout, Oncorhynchus mykiss. Biochem. J. 2002; 368: 611.
    • (2002) Biochem. J , vol.368 , pp. 611
    • Fernandes, J.M.1    Kemp, G.D.2    Molle, M.G.3    Smith, V.J.4
  • 16
    • 7544229161 scopus 로고    scopus 로고
    • Application of mass spectrometry to the identification and quantification of histone post-translational modifications
    • Freitas MA, Sklenar AR, Parthun MR. Application of mass spectrometry to the identification and quantification of histone post-translational modifications. J. Cell. Biochem. 2004; 92: 691.
    • (2004) J. Cell. Biochem , vol.92 , pp. 691
    • Freitas, M.A.1    Sklenar, A.R.2    Parthun, M.R.3
  • 17
    • 2442623186 scopus 로고    scopus 로고
    • A combination of different mass spectroscopic techniques for the analysis of dynamic changes of histone modifications
    • Bonaldi T, Imhof A, Regula JT. A combination of different mass spectroscopic techniques for the analysis of dynamic changes of histone modifications. Proteomics 2004; 4: 1382.
    • (2004) Proteomics , vol.4 , pp. 1382
    • Bonaldi, T.1    Imhof, A.2    Regula, J.T.3
  • 18
    • 0842326028 scopus 로고    scopus 로고
    • The use of mass spectrometry for the analysis of histone modifications
    • Bonaldi T, Regula JT, Imhof A. The use of mass spectrometry for the analysis of histone modifications. Meth. Enzymol. 2004; 377: 111.
    • (2004) Meth. Enzymol , vol.377 , pp. 111
    • Bonaldi, T.1    Regula, J.T.2    Imhof, A.3
  • 19
    • 0347123341 scopus 로고    scopus 로고
    • Differential expression of histone post-translational modifications in acute myeloid and chronic lymphocytic leukemia determined by high-pressure liquid chromatography and mass spectrometry
    • Zhang L, Freitas MA, Wickham J, Parthun MR, Klisovic MI, Marcucci G, Byrd JC. Differential expression of histone post-translational modifications in acute myeloid and chronic lymphocytic leukemia determined by high-pressure liquid chromatography and mass spectrometry. J. Am. Soc. Mass Spectrom. 2004; 15: 77.
    • (2004) J. Am. Soc. Mass Spectrom , vol.15 , pp. 77
    • Zhang, L.1    Freitas, M.A.2    Wickham, J.3    Parthun, M.R.4    Klisovic, M.I.5    Marcucci, G.6    Byrd, J.C.7
  • 21
    • 0037419508 scopus 로고    scopus 로고
    • Analysis of core histones by liquid chromatography-mass spectrometry and peptide mapping
    • Zhang K, Tang H. Analysis of core histones by liquid chromatography-mass spectrometry and peptide mapping. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 2003; 783: 173.
    • (2003) J. Chromatogr. B Analyt. Technol. Biomed. Life Sci , vol.783 , pp. 173
    • Zhang, K.1    Tang, H.2
  • 23
    • 33645471026 scopus 로고    scopus 로고
    • Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry
    • Bonenfant D, Coulot M, Towbin H, Schindler P, van Oostrum J. Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry. Mol. Cell. Proteomics 2006; 5: 541.
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 541
    • Bonenfant, D.1    Coulot, M.2    Towbin, H.3    Schindler, P.4    van Oostrum, J.5
  • 24
    • 0037402422 scopus 로고    scopus 로고
    • Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4
    • Smith CM, Gafken PR, Zhang Z, Gottschling DE, Smith JB, Smith DL. Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4. Anal. Biochem. 2003; 316: 23.
    • (2003) Anal. Biochem , vol.316 , pp. 23
    • Smith, C.M.1    Gafken, P.R.2    Zhang, Z.3    Gottschling, D.E.4    Smith, J.B.5    Smith, D.L.6
  • 25
    • 10644260359 scopus 로고    scopus 로고
    • A mass spectrometric "Western blot" to evaluate the correlations between histone methylation and histone acetylation
    • Zhang K, Siino JS, Jones PR, Yau PM, Bradbury EM. A mass spectrometric "Western blot" to evaluate the correlations between histone methylation and histone acetylation. Proteomics 2004; 4: 3765.
    • (2004) Proteomics , vol.4 , pp. 3765
    • Zhang, K.1    Siino, J.S.2    Jones, P.R.3    Yau, P.M.4    Bradbury, E.M.5
  • 27
    • 0942276237 scopus 로고    scopus 로고
    • Differentiation between peptides containing acetylated or tri-methylated lysines by mass spectrometry: An application for determining lysine 9 acetylation and methylation of histone H3
    • Zhang K, Yau PM, Chandrasekhar B, New R, Kondrat R, Imai BS, Bradbury ME. Differentiation between peptides containing acetylated or tri-methylated lysines by mass spectrometry: an application for determining lysine 9 acetylation and methylation of histone H3. Proteomics 2004; 4: 1.
    • (2004) Proteomics , vol.4 , pp. 1
    • Zhang, K.1    Yau, P.M.2    Chandrasekhar, B.3    New, R.4    Kondrat, R.5    Imai, B.S.6    Bradbury, M.E.7
  • 28
    • 0037208331 scopus 로고    scopus 로고
    • Epsilon N,N,N-trimethyllysine- specific ions in matrix-assisted laser desorption/ionization-tandem mass spectrometry
    • Hirota J, Satomi Y, Yoshikawa K, Takao T. Epsilon N,N,N-trimethyllysine- specific ions in matrix-assisted laser desorption/ionization-tandem mass spectrometry. Rapid Commun. Mass Spectrom. 2003; 17: 371.
    • (2003) Rapid Commun. Mass Spectrom , vol.17 , pp. 371
    • Hirota, J.1    Satomi, Y.2    Yoshikawa, K.3    Takao, T.4
  • 29
    • 32344452605 scopus 로고    scopus 로고
    • Precise characterization of human histones in the H2A gene family by top down mass spectrometry
    • Boyne MT II, Pesavento JJ, Mizzen CA, Kelleher NL. Precise characterization of human histones in the H2A gene family by top down mass spectrometry. J. Proteome Res. 2006; 5: 248.
    • (2006) J. Proteome Res , vol.5 , pp. 248
    • Boyne II, M.T.1    Pesavento, J.J.2    Mizzen, C.A.3    Kelleher, N.L.4
  • 30
    • 1642272372 scopus 로고    scopus 로고
    • Shotgun annotation of histone modifications: A new approach for streamlined characterization of proteins by top down mass spectrometry
    • Pesavento JJ, Kim YB, Taylor GK, Kelleher NL. Shotgun annotation of histone modifications: a new approach for streamlined characterization of proteins by top down mass spectrometry. J. Am. Chem. Soc. 2004; 126: 3386.
    • (2004) J. Am. Chem. Soc , vol.126 , pp. 3386
    • Pesavento, J.J.1    Kim, Y.B.2    Taylor, G.K.3    Kelleher, N.L.4
  • 31
  • 32
    • 32344453899 scopus 로고    scopus 로고
    • Mass spectrometric characterization of human histone H3: A bird's eye view
    • Thomas CE, Kelleher NL, Mizzen CA. Mass spectrometric characterization of human histone H3: a bird's eye view. J. Proteome Res. 2006; 5: 240.
    • (2006) J. Proteome Res , vol.5 , pp. 240
    • Thomas, C.E.1    Kelleher, N.L.2    Mizzen, C.A.3
  • 33
    • 0141483484 scopus 로고    scopus 로고
    • Identification of novel histone post-translational modifications by peptide mass fingerprinting
    • Zhang L, Eugeni EE, Parthun MR, Freitas MA. Identification of novel histone post-translational modifications by peptide mass fingerprinting. Chromosoma 2003; 112: 77.
    • (2003) Chromosoma , vol.112 , pp. 77
    • Zhang, L.1    Eugeni, E.E.2    Parthun, M.R.3    Freitas, M.A.4
  • 40
    • 0036850325 scopus 로고    scopus 로고
    • Cellular memory and the histone code
    • Turner BM. Cellular memory and the histone code. Cell 2002; 111: 285.
    • (2002) Cell , vol.111 , pp. 285
    • Turner, B.M.1
  • 41
    • 0033214277 scopus 로고    scopus 로고
    • The dominance of arginine-containing peptides in MALDI-derived tryptic mass fingerprints of proteins
    • Krause E, Wenschuh H, Jungblut PR. The dominance of arginine-containing peptides in MALDI-derived tryptic mass fingerprints of proteins. Anal. Chem. 1999; 71: 4160.
    • (1999) Anal. Chem , vol.71 , pp. 4160
    • Krause, E.1    Wenschuh, H.2    Jungblut, P.R.3
  • 42
    • 0036829396 scopus 로고    scopus 로고
    • Probing lysine acetylation with a modification-specific marker ion using high-performance liquid chromatography/electrospray-mass spectrometry with collision-induced dissociation
    • Kim JY, Kim KW, Kwon HJ, Lee DW, YooJS. Probing lysine acetylation with a modification-specific marker ion using high-performance liquid chromatography/electrospray-mass spectrometry with collision-induced dissociation. Anal. Chem. 2002; 74: 5443.
    • (2002) Anal. Chem , vol.74 , pp. 5443
    • Kim, J.Y.1    Kim, K.W.2    Kwon, H.J.3    Lee, D.W.4    YooJS5
  • 43
    • 0037099468 scopus 로고    scopus 로고
    • Histone modification and replacement in chromatin activation
    • Goll MG, Bestor TH. Histone modification and replacement in chromatin activation. Genes Dev. 2002; 16: 1739.
    • (2002) Genes Dev , vol.16 , pp. 1739
    • Goll, M.G.1    Bestor, T.H.2
  • 44
    • 0037098044 scopus 로고    scopus 로고
    • Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association
    • Ng HH, Feng Q, Wang H, Erdjument-Bromage H, Tempst P, Zhang Y, Struhl K. Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association. Genes Dev. 2002; 16: 1518.
    • (2002) Genes Dev , vol.16 , pp. 1518
    • HH, N.1    Feng, Q.2    Wang, H.3    Erdjument-Bromage, H.4    Tempst, P.5    Zhang, Y.6    Struhl, K.7
  • 45
    • 0014876701 scopus 로고
    • Modification of histones during spermiogenesis in trout: A molecular mechanism for altering histone binding to DNA
    • Sung MT, Dixon GH. Modification of histones during spermiogenesis in trout: a molecular mechanism for altering histone binding to DNA. Proc. Natl. Acad. Sci. USA 1970; 67: 1616.
    • (1970) Proc. Natl. Acad. Sci. USA , vol.67 , pp. 1616
    • Sung, M.T.1    Dixon, G.H.2
  • 47
    • 0032561422 scopus 로고    scopus 로고
    • Parasin I, an antimicrobial peptide derived from histone H2A in the catfish, Parasilurus asotus
    • Park IY, Park CB, Kim MS, Kim SC. Parasin I, an antimicrobial peptide derived from histone H2A in the catfish, Parasilurus asotus. FEBS Lett. 1998; 437: 258.
    • (1998) FEBS Lett , vol.437 , pp. 258
    • Park, I.Y.1    Park, C.B.2    Kim, M.S.3    Kim, S.C.4
  • 48
    • 0042121501 scopus 로고    scopus 로고
    • Birkemo GA, Luders T, Andersen O, Nes IF, Nissen-Meyer J. Hipposin, a histone-derived antimicrobial peptide in Atlantic halibut (Hippoglossus hippoglossus L.). Biochim. Biophys. Acta 2003; 1646: 207.
    • Birkemo GA, Luders T, Andersen O, Nes IF, Nissen-Meyer J. Hipposin, a histone-derived antimicrobial peptide in Atlantic halibut (Hippoglossus hippoglossus L.). Biochim. Biophys. Acta 2003; 1646: 207.
  • 50
    • 33645471026 scopus 로고    scopus 로고
    • Characterization of histones H2A and H2B variants and their post-translational modifications by mass spectrometry
    • Bonenfant D, Coulot M, Towbin H, Schindler P, van Oostrum J. Characterization of histones H2A and H2B variants and their post-translational modifications by mass spectrometry. Mol. Cell. Proteomics 2006; 5: 5541.
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 5541
    • Bonenfant, D.1    Coulot, M.2    Towbin, H.3    Schindler, P.4    van Oostrum, J.5
  • 51
    • 0016723918 scopus 로고
    • Processing of newly synthesized histone molecules
    • Ruiz-Carrillo A, WanghLJ, Allfrey VG. Processing of newly synthesized histone molecules. Science 1975; 190: 117.
    • (1975) Science , vol.190 , pp. 117
    • Ruiz-Carrillo, A.1    Wangh, L.J.2    Allfrey, V.G.3
  • 53
    • 2542440487 scopus 로고    scopus 로고
    • Phosphorylation of histone H2A inhibits transcription on chromatin templates
    • Zhang Y, Griffin K, Mondal N, Parvin JD. Phosphorylation of histone H2A inhibits transcription on chromatin templates. J. Biol. Chem. 2004; 279: 21 866.
    • (2004) J. Biol. Chem , vol.279 , pp. 21-866
    • Zhang, Y.1    Griffin, K.2    Mondal, N.3    Parvin, J.D.4
  • 54
    • 0042327762 scopus 로고    scopus 로고
    • Isolation and characterisation of oncorhyncin II, a histone H1-derived antimicrobial peptide from skin secretions of rainbow trout, Oncorhynchus mykiss
    • Fernandes JM, Molle G, Kemp GD, Smith VJ. Isolation and characterisation of oncorhyncin II, a histone H1-derived antimicrobial peptide from skin secretions of rainbow trout, Oncorhynchus mykiss. Dev. Comp. Immunol. 2004; 28: 127.
    • (2004) Dev. Comp. Immunol , vol.28 , pp. 127
    • Fernandes, J.M.1    Molle, G.2    Kemp, G.D.3    Smith, V.J.4


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