ZIC2-dependent transcriptional regulation is mediated by DNA-dependent protein kinase, poly(ADP-ribose) polymerase, and RNA helicase A

Journal of Biological Chemistry

Volumn 282, Issue 13, 2007, Pages 9983-9995

  Ishiguro, Akira ^a   Ideta, Maki ^a   Mikoshiba, Katsuhiko ^a   Chen, David J ^b   Aruga, Jun ^a  

^a RIKEN BRAIN SCIENCE INSTITUTE   (Japan)

^b UNIVERSITY OF TEXAS SOUTHWESTERN MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOPRECIPITATION; MAMMALIAN ZIC2 MUTATION; ZINC FINGER PROTEINS;

COMPLEXATION; DNA; MAMMALS; MOLECULAR WEIGHT; MUTAGENESIS; PHOSPHORYLATION; TRANSCRIPTION;

PROTEINS;

DNA DEPENDENT PROTEIN KINASE; KU ANTIGEN; NICOTINAMIDE ADENINE DINUCLEOTIDE ADENOSINE DIPHOSPHATE RIBOSYLTRANSFERASE; PROTEIN ZIC2; RNA HELICASE; RNA HELICASE A; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN; DEAD BOX PROTEIN; DHX9 PROTEIN, HUMAN; NUCLEAR PROTEIN; TRANSCRIPTION FACTOR; TUMOR PROTEIN; ZIC2 PROTEIN, HUMAN;

ARTICLE; COMPLEX FORMATION; CONTROLLED STUDY; HUMAN; HUMAN CELL; IMMUNOPRECIPITATION; IN VITRO STUDY; MOLECULAR MECHANICS; MOLECULAR WEIGHT; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FAMILY; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN PHOSPHORYLATION; PROTEIN PROTEIN INTERACTION; TRANSCRIPTION REGULATION; CELL LINE; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; METABOLISM; PHOSPHORYLATION; PHYSIOLOGY;

ANIMALIA; MAMMALIA;

CELL LINE; DEAD-BOX RNA HELICASES; DNA-ACTIVATED PROTEIN KINASE; GENE EXPRESSION REGULATION; HUMANS; NEOPLASM PROTEINS; NUCLEAR PROTEINS; PHOSPHORYLATION; POLY(ADP-RIBOSE) POLYMERASES; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

EID: 34248142959     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M610821200     Document Type: Article

References (65)

1. Aruga, J. (2004) Mol. Cell. Neurosci. 26, 205-221
2. Grinberg, I., and Millen, K. J. (2005) Clin. Genet. 67, 290-296
3. Brown, S. A., Warburton, D., Brown, L. Y., Yu, C. Y., Roeder, E. R., Stengel-Rutkowski, S., Hennekam, R. C., and Muenke, M. (1998) Nat. Genet. 20, 180-183
4. Nagai, T., Aruga, J., Minowa, O., Sugimoto, T., Ohno, Y., Noda, T., and Mikoshiba, K. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 1618-1623
5. Nakata, K., Nagai, T., Aruga, J., and Mikoshiba, K. (1998) Mech. Dev. 75, 43-51
6. Salero, E., Perez-Sen, R., Aruga, J., Gimenez, C., and Zafra, F. (2001) J. Biol. Chem. 276, 1881-1888
7. Mizugishi, K., Aruga, J., Nakata, K., and Mikoshiba, K. (2001) J. Biol. Chem. 276, 2180-2188
8. Yagi, K., Satoh, N., and Satou, Y. (2004) Dev. Biol. 274, 478-489
9. Pavletich, N. P., and Pabo, C. O. (1993) Science 261, 1701-1707
10. Aruga, J., Kamiya, A., Takahashi, H., Fujimi, T. J., Shimizu, Y., Ohkawa, K., Yazawa, S., Umesono, Y., Noguchi, H., Shimizu, T., Saitou, N., Mikoshiba, K., Sakaki, Y., Agata, K., and Toyoda, A. (2006) Genomics 87, 783-792
11. Mizugishi, K., Hatayama, M., Tohmonda, T., Ogawa, M., Inoue, T., Mikoshiba, K., and Aruga, J. (2004) Biochem. Biophys. Res. Commun. 320, 233-240
12. Fukumura, R., Araki, R., Fujimori, A., Mori, M., Saito, T., Watanabe, F., Sarashi, M., Itsukaichi, H., Eguchi-Kasai, K., Sato, K., Tatsumi, K., and Abe, M. (1998) J. Biol. Chem. 273, 13058-13064
13. Tzung, T. Y., and Runger, T. M. (1998) Int. J. Radiat. Biol. 73, 469-474
14. Minakawa, M., Sugimoto, T., Aizawa, S., and Tomooka, Y. (1998) Brain Res. 813, 172-176
15. Ishiguro, A., Inoue, T., Mikoshiba, K., and Aruga, J. (2004) Biochem. Biophys. Res. Commun. 324, 302-307
16. Weinmann, A. S., and Farnham, P. J. (2002) Methods (San Diego) 26, 37-47
17. Hoshino, J., Aruga, J., Ishiguro, A., and Mikoshiba, K. (2003) Brain Res. Mol. Brain Res. 120, 57-64
18. Blunt, T., Finnie, N. J., Taccioli, G. E., Smith, G. C., Demengeot, J., Gottlieb, T. M., Mizuta, R., Varghese, A. J., Alt, F. W., Jeggo, P. A., and Jackson, S. P. (1995) Cell 80, 813-823
19. Gao, Y., Chaudhuri, J., Zhu, C., Davidson, L., Weaver, D. T., and Alt, F. W. (1998) Immunity 9, 367-376
20. Giffin, W., Torrance, H., Rodda, D. J., Prefontaine, G. G., Pope, L., and Hache, R. J. (1996) Nature 380, 265-268
21. Lieber, M. R. (1999) Genes Cells 4, 77-85
22. Peterson, S. R., Jesch, S. A., Chamberlin, T. N., Dvir, A., Rabindran, S. K., Wu, C., and Dynan, W. S. (1995) J. Biol. Chem. 270, 1449-1454
23. Giffin, W., Gong, W., Schild-Poulter, C., and Hache, R. J. (1999) Mol. Cell. Biol. 19, 4065-4078
24. Anderson, M. G., Scoggin, K. E., Simbulan-Rosenthal, C. M., and Steadman, J. A. (2000) J. Virol. 74, 2169-2177
25. Cervellera, M. N., and Sala, A. (2000) J. Biol. Chem. 275, 10692-10696
26. Hassa, P. O., Covic, M., Hasan, S., Imhof, R., and Hottiger, M. O. (2001) J. Biol. Chem. 276, 45588-45597
27. Ju, B. G., Solum, D., Song, E. J., Lee, K. J., Rose, D. W., Glass, C. K., and Rosenfeld, M. G. (2004) Cell 119, 815-829
28. Pavri, R., Lewis, B., Kim, T. K., Dilworth, F. J., Erdjument-Bromage, H., Tempst, P., de Murcia, G., Evans, R., Chambon, P., and Reinberg, D. (2005) Mol. Cell 18, 83-96
29. Yu, W., Ginjala, V., Pant, V., Chernukhin, I., Whitehead, J., Docquier, F., Farrar, D., Tavoosidana, G., Mukhopadhyay, R., Kanduri, C., Oshimura, M., Feinberg, A. P., Lobanenkov, V., Klenova, E., and Ohlsson, R. (2004) Nat. Genet. 36, 1105-1110
30. Nakajima, T., Uchida, C., Anderson, S. F., Lee, C. G., Hurwitz, J., Parvin, J. D., and Montminy, M. (1997) Cell 90, 1107-1112
31. Gottlieb, T. M., and Jackson, S. P. (1993) Cell 72, 131-142
32. Ariumi, Y., Turelli, P., Masutani, M., and Trono, D. (2005) J. Virol. 79, 2973-2978
33. Sartorius, C. A., Takimoto, G. S., Richer, J. K., Tung, L., and Horwitz, K. B. (2000) J. Mol. Endocrinol. 24, 165-182
34. Zhang, S., Schlott, B., Gorlach, M., and Grosse, F. (2004) Nucleic Acids Res. 32, 1-10
35. Koike, M., Awaji, T., Kataoka, M., Tsujimoto, G., Kartasova, T., Koike, A., and Shiomi, T. (1999) J. Cell Sci. 112, 4031-4039
36. Ruscetti, T., Lehnert, B. E., Halbrook, J., Le Trong, H., Hoekstra, M. F., Chen, D. J., and Peterson, S. R. (1998) J. Biol. Chem. 273, 14461-14467
37. Aratani, S., Fujii, R., Fujita, H., Fukamizu, A., and Nakajima, T. (2003) Int. J. Mol. Med. 12, 175-180
38. Pellizzoni, L., Charroux, B., Rappsilber, J., Mann, M., and Dreyfuss, G. (2001) J. Cell Biol. 152, 75-85
39. Collis, S. J., DeWeese, T. L., Jeggo, P. A., and Parker, A. R. (2005) Oncogene 24, 949-961
40. Lees-Miller, S. P., Chen, Y. R., and Anderson, C. W. (1990) Mol. Cell. Biol. 10, 6472-6481
41. Iijima, S., Teraoka, H., Date, T., and Tsukada, K. (1992) Eur. J. Biochem. 206, 595-603
42. Lees-Miller, S. P., Sakaguchi, K., Ullrich, S. J., Appella, E., and Anderson, C. W. (1992) Mol. Cell. Biol. 12, 5041-5049
43. Dvir, A., Stein, L. Y., Calore, B. L., and Dynan, W. S. (1993) J. Biol. Chem. 268, 10440-10447
44. Jackson, S., Gottlieb, T., and Hartley, K. (1993) Adv. Second Messenger Phosphoprotein Res. 28, 279-286
45. Liu, S. H., Ma, J. T., Yueh, A. Y., Lees-Miller, S. P., Anderson, C. W., and Ng, S. Y. (1993) J. Biol. Chem. 268, 21147-21154
46. Chibazakura, T., Watanabe, F., Kitajima, S., Tsukada, K., Yasukochi, Y., and Teraoka, H. (1997) Eur. J. Biochem. 247, 1166-1173
47. Schild-Poulter, C., Matheos, D., Novac, O., Cui, B., Giffin, W., Ruiz, M. T., Price, G. B., Zannis-Hadjopoulos, M., and Hache, R. J. (2003) DNA Cell Biol. 22, 65-78
48. Lebrun, P., Montminy, M. R., and Van Obberghen, E. (2005) J. Biol. Chem. 280, 38203-38210
49. Kim, M. Y., Zhang, T., and Kraus, W. L. (2005) Genes Dev. 19, 1951-1967
50. Ame, J. C., Schreiber, V., Fraulob, V., Dolle, P., de Murcia, G., and Niedergang, C. P. (2001) J. Biol. Chem. 276, 11092-11099
51. Kraus, W. L., and Lis, J. T. (2003) Cell 113, 677-683
52. Galande, S., and Kohwi-Shigematsu, T. (1999) J. Biol. Chem. 274, 20521-20528
53. Ariumi, Y., Masutani, M., Copeland, T. D., Mimori, T., Sugimura, T., Shimotohno, K., Ueda, K., Hatanaka, M., and Noda, M. (1999) Oncogene 18, 4616-4625
54. Veuger, S. J., Curtin, N. J., Smith, G. C., and Durkacz, B. W. (2004) Oncogene 23, 7322-7329
55. Zhang, Q., Williams, E. S., Askin, K. F., Peng, Y., Bedford, J. S., Liber, H. L., and Bailey, S. M. (2005) Radiat. Res. 164, 497-504
56. Aratani, S., Fujii, R., Oishi, T., Fujita, H., Amano, T., Ohshima, T., Hagiwara, M., Fukamizu, A., and Nakajima, T. (2001) Mol. Cell. Biol. 21, 4460-4469
57. Schlegel, B. P., Starita, L. M., and Parvin, J. D. (2003) Oncogene 22, 983-991
58. Tetsuka, T., Uranishi, H., Sanda, T., Asamitsu, K., Yang, J. P., Wong-Staal, F., and Okamoto, T. (2004) Eur. J. Biochem. 271, 3741-3751
59. Nakata, K., Koyabu, Y., Aruga, J., and Mikoshiba, K. (2000) Mech. Dev. 99, 83-91
60. Nussenzweig, A., Chen, C., da Costa Soares, V., Sanchez, M., Sokol, K., Nussenzweig, M. C., and Li, G. C. (1996) Nature 382, 551-555
61. Henrie, M. S., Kurimasa, A., Burma, S., Menissier-de Murcia, J., de Murcia, G., Li, G. C., and Chen, D. J. (2003) DNA Repair 2, 151-158
62. Lee, C. G., da Costa Soares, V., Newberger, C., Manova, K., Lacy, E., and Hurwitz, J. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 13709-13713
63. Aruga, J., Tohmonda, T., Homma, S., and Mikoshiba, K. (2002) Dev. Biol. 244, 329-341
64. Aruga, J., Inoue, T., Hoshino, J., and Mikoshiba, K. (2002) J. Neurosci. 22, 218-225
65. Inoue, T., Hatayama, M., Tohmonda, T., Itohara, S., Aruga, J., and Mikoshiba, K. (2004) Dev. Biol. 270, 146-162