pPSX: A novel vector for the cloning and heterologous expression of antitumor antibiotic gene clusters

Plasmid

Volumn 57, Issue 3, 2007, Pages 306-313

  Sarovich, Derek S ^a   Pemberton, John M ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Cosmid vector; Heterologous expression; High stability; Metagenome; Staurosporine

Indexed keywords

ANTINEOPLASTIC ANTIBIOTIC; UNCLASSIFIED DRUG; VIOLACEIN;

ARTICLE; CLONING VECTOR; CONTROLLED STUDY; COSMID VECTOR; ELECTROPORATION; ESCHERICHIA COLI K 12; GENE CLUSTER; GENE CONSTRUCT; GENE INSERTION; GENE LIBRARY; GENE SEQUENCE; HETEROLOGOUS EXPRESSION; HOST; MOLECULAR CLONING; NONHUMAN; PLASMID; PPSX COSMID VECTOR; PSEUDOMONAS STUTZERI; RHODOBACTER SPHAEROIDES;

ANTIBIOTICS, ANTINEOPLASTIC; ANTINEOPLASTIC AGENTS; CLONING, MOLECULAR; CONJUGATION, GENETIC; COSMIDS; CYCLOTIDES; ESCHERICHIA COLI K12; GENETIC VECTORS; MULTIGENE FAMILY; PLASMIDS; PSEUDOMONAS STUTZERI; RHODOBACTER SPHAEROIDES;

ESCHERICHIA COLI; PSEUDOMONAS STUTZERI; RHODOBACTER SPHAEROIDES;

EID: 34247135056     PISSN: 0147619X     EISSN: 10959890     Source Type: Journal    
DOI: 10.1016/j.plasmid.2006.11.004     Document Type: Article

References (36)

1. Akinaga S., Sugiyama K., and Akiyama T. UCN-01 (7-hydroxystaurosporine) and other indolocarbazole compounds: a new generation of anti-cancer agents for the new century?. Anticancer Drug Des. 15 (2000) 43-52
2. August P.R., Grossman T.H., Minor C., Draper M.P., Macnell I.A., Pemberton J.M., Call K.M., Holt D., and Osbourne M.S. Sequence analysis and functional characterisation of the violacein biosynthetic pathway from Chromobacterium violaceum. J. Microb. Biotechnol. 2 (2000) 513-519
3. Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L., Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D., Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A., Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.H., Kieser T., Larke L., Murphy L., Oliver K., O'Neil S., Rabbinowitsch E., Rajandream M.A., Rutherford K., Rutter S., Seeger K., Saunders D., Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A., Woodward J., Barrell B.G., Parkhill J., and Hopwood D.A. Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417 (2002) 141-147
4. Borck K., Beggs J.D., Brammar W.J., Hopkins A.S., and Murray N.E. The construction in vitro of transducing derivatives of phage lambda. Mol. Gen. Genet. 146 (1976) 199-207
5. Friedman A.M., Long S.R., Brown S.E., Buikema W.J., and Ausubel F.M. Construction of a broad host range cosmid cloning vector and its use in the genetic analysis of Rhizobium mutants. Gene 18 (1982) 289-296
6. Gans J., Wolinsky M., and Dunbar J. Computational improvements reveal great bacterial diversity and high metal toxicity in soil. Science 309 (2005) 1387-1390
7. Hanahan D. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166 (1983) 557-580
8. Hohn B., and Collins J. A small cosmid for efficient cloning of large DNA fragments. Gene 11 (1980) 291-298
9. Howard-Jones A.R., and Walsh C.T. Enzymatic generation of the chromopyrrolic acid scaffold of rebeccamycin by the tandem action of RebO and RebD. Biochemistry 44 (2005) 15652-15663
10. Hyun C.G., Bililign T., Liao J., and Thorson J.S. The biosynthesis of indolocarbazoles in a heterologous E. coli host. Chembiochem 4 (2003) 114-117
11. Inoue H., Takimura O., Kawaguchi K., Nitoda T., Fuse H., Murakami K., and Yamaoka Y. Tin-carbon cleavage of organotin compounds by pyoverdine from Pseudomonas chlororaphis. Appl. Environ. Microbiol. 69 (2003) 878-883
12. Jana S., and Deb J.K. Strategies for efficient production of heterologous proteins in Escherichia coli. Appl. Microbiol. Biotechnol. 67 (2005) 289-298
13. Karn J., Brenner S., Barret L., and Cesarini G. Novel bacteriophage λ cloning vector. Proc. Natl. Acad. Sci. USA 77 (1980) 5172-5176
14. Keen N.T., Tamaki S., Kobayashi D., and Trollinger D. Improved broad-host-range plasmids for DNA cloning in Gram-negative bacteria. Gene 70 (1988) 191-197
15. Laravllaand P., and Fernandodela C. Physical and genetic map of the IncW plasmid R388. Plasmid 20 (1988) 155-157
16. Lee P.C., Momen A.Z.R., Mijts B.N., and Schmidt-Dannert C. Biosynthesis of structurally novel carotenoids in Escherichia coli. Chem. Biol. 10 (2003) 453-462
17. Long B.H., Rose W.C., Vyas D.M., Matson J.A., and Forenza S. Discovery of antitumor indolocarbazoles: rebeccamycin, NSC 655649, and fluoroindolocarbazoles. Curr. Med. Chem. Anticancer Agents 2 (2002) 255-266
18. Onaka H., Taniguchi S., Igarashi Y., and Furumai T. Characterization of the biosynthetic gene cluster of rebeccamycin from Lechevalieria aerocolonigenes ATCC 39243. Biosci. Biotechnol. Biochem. 67 (2003) 127-138
19. Palleroni N.J., Doudoroff M., Stanier R.Y., Solanes R.E., and Mandel M. Taxonomy of the aerobic pseudomonads: the properties of the Pseudomonas stutzeri group. J. Gen. Microbiol. 60 (1970) 215-231
20. Pansegrau W., Lanka E., Barth P.T., Figurski D.H., Guiney D.G., Haas D., Helinski D.R., Schwab H., Stanisich V.A., and Thomas C.M. Complete nucleotide sequence of Birmingham IncP alpha plasmids. Compilation and comparative analysis. J. Mol. Biol. 239 (1994) 623-663
21. Pemberton J.M., and Harding C.M. Cloning of carotenoid biosynthesis genes from Rhodopseudomonas sphaeroides. Curr. Microbiol. 14 (1986) 25-29
22. Pemberton J.M., and Harding C.M. Expression of Rhodopseudomonas sphaeroides carotenoid photopigment genes in phylogenetically related non photosynthetic bacteria. Curr. Microbiol. 15 (1987) 67-71
23. Pemberton J.M., Vincent K.M., and Penfold R.J. Cloning and heterologous expression of the violacein biosynthesis gene cluster from Chromobacterium violaceum. Curr. Microbiol. 22 (1991) 355-358
24. Penfold R.J., and Pemberton J.M. Sequencing, chromosomal inactivation, and functional expression in Escherichia coli of ppsR, a gene which represses carotenoid and bacteriochlorophyll synthesis in Rhodobacter sphaeroides. J. Bacteriol. 176 (1994) 2869-2876
25. Pinyakong O., Habe H., and Omori T. The unique aromatic catabolic genes in sphingomonads degrading polycyclic aromatic hydrocarbons (PAHs). J. Gen. Appl. Microbiol. 49 (2003) 1-19
26. Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning-A Laboratory Manual. second ed. (1989), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
27. Sanchez C., Butovich I.A., Brana A.F., Rohr J., Mendez C., and Salas J.A. The biosynthetic gene cluster for the antitumor rebeccamycin: characterization and generation of indolocarbazole derivatives. Chem. Biol. 9 (2002) 519-531
28. Sanchez C., Zhu L., Brana A.F., Salas A.P., Rohr J., Mendez C., and Salas J.A. Combinatorial biosynthesis of antitumour indolocarbazole compounds. Proc. Natl. Acad. Sci. USA 102 (2005) 461-466
29. Sanchez C., Mendez C., and Salas J.A. Engineering biosynthetic pathways to generate antitumor indolocarbazole derivatives. J. Ind. Microbiol. Biotech. 33 (2006) 560-568
30. Sia E.A., Roberts R.C., Easter C., Helinski D.R., and Figurski D.H. Different relative importances of the par operons and the effect of conjugal transfer on the maintenance of intact promiscuous plasmid RK2. J. Bacteriol. 177 (1995) 2789-2797
31. Simon R., Priefer U., and Pohler A. A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram-negative bacteria. Nat. Biotechnol. 1 (1983) 784-791
32. Staskawicz B., Dahlbeck D., Keen N., and Napoli C. Molecular characterization of cloned avirulence genes from race 0 and race 1 of Pseudomonas syringae pv. glycinea. J. Bacteriol. 169 (1987) 5789-5794
33. Tao Q., and Zhang H. Cloning and stable maintenance of DNA fragments over 300 kb in Escherichia coli with conventional plasmid-based vectors. Nucleic Acids Res. 26 (1998) 4901-4909
34. Torsnik V., Goksoyr F., and Daae F.L. High diversity in DNA of soil bacteria. Appl. Environ. Microbiol. 56 (1990) 782-787
35. Yanisch-Perron C., Vieira J., and Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33 (1985) 103-119
36. Vanbleu E., Marchal K., and Vanderleyden J. Genetic and physical map of the pLAFR1 vector. DNA Seq. 15 (2004) 225-227