Structural and functional fingerprint of the mitochondrial ATP-binding cassette transporter Mdl1 from Saccharomyces cerevisiae

Journal of Biological Chemistry

Volumn 282, Issue 6, 2007, Pages 3951-3961

  Hofacker, Matthias ^a   Gompf, Simone ^a   Zutz, Ariane ^a   Presenti, Chiara ^a   Haase, Winfried ^b   Van Der Does, Chris ^a   Model, Kirstin ^b,c   Tampé, Robert ^a  

^a GOETHE UNIVERSITY   (Germany)

^b MAX PLANCK INSTITUTE OF BIOPHYSICS   (Germany)

^c MRC LABORATORY OF MOLECULAR BIOLOGY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING CASSETTE TRANSPORTERS; HOMODIMERIC COMPLEX; RESPIRATORY CHAIN COMPLEXES; TRANSPORT COMPLEX;

DEGRADATION; ENZYMES; LIPOSOMES; MUTAGENESIS; QUALITY CONTROL; YEAST;

ADENOSINETRIPHOSPHATE;

ABC TRANSPORTER; ADENOSINE TRIPHOSPHATASE; ADENOSINE TRIPHOSPHATE; FUNGAL PROTEIN; GLUTAMIC ACID; HISTIDINE; HOMODIMER; LIPOSOME; MITOCHONDRIAL PROTEIN; MDL1 PROTEIN, S CEREVISIAE; PROTEOLIPID; PROTEOLIPOSOMES; SACCHAROMYCES CEREVISIAE PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; ELECTRON MICROSCOPY; ENZYME ACTIVITY; HYDROLYSIS; MITOCHONDRIAL MEMBRANE; MUTAGENESIS; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN DEGRADATION; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN METABOLISM; PROTEIN MOTIF; PROTEIN PURIFICATION; PROTEIN STRUCTURE; PROTEIN TRANSPORT; RESPIRATORY CHAIN; SACCHAROMYCES CEREVISIAE; AMINO ACID SEQUENCE; CHEMISTRY; DIMERIZATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; PEPTIDE MAPPING; PHYSIOLOGY; SOLUBILITY; STRUCTURE ACTIVITY RELATION; ULTRASTRUCTURE;

SACCHAROMYCES CEREVISIAE;

ADENOSINE TRIPHOSPHATASES; AMINO ACID SEQUENCE; ATP-BINDING CASSETTE TRANSPORTERS; DIMERIZATION; LIPOSOMES; MITOCHONDRIAL PROTEINS; MOLECULAR SEQUENCE DATA; PEPTIDE MAPPING; PROTEIN CONFORMATION; PROTEOLIPIDS; SACCHAROMYCES CEREVISIAE PROTEINS; SOLUBILITY; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 33947496630     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M609899200     Document Type: Article

References (64)

1. Higgins, C. F. (1992) Annu. Rev. Cell Biol. 8, 67-113
2. Davidson, A. L., and Chen, J. (2004) Annu. Rev. Biochem. 73, 241-268
3. van der Does, C., and Tampé, R. (2004) Biol. Chem. 385, 927-933
4. Dean, M., Allikmets, R., Gerrard, B., Stewart, C., Kistler, A., Shafer, B., Michaelis, S., and Strathern, J. (1994) Yeast 10, 377-383
5. Young, L., Leonhard, K., Tatsuta, T., Trowsdale, J., and Langer, T. (2001) Science 291, 2135-2138
6. Arnold, I., and Langer, T. (2002) Biochim. Biophys. Acta 1592, 89-96
7. Hogue, D. L., Liu, L., and Ling, V. (1999) J. Mol. Biol. 285, 379-389
8. Shirihai, O. S., Gregory, T., Yu, C., Orkin, S. H., and Weiss, M. J. (2000) EMBO J. 19, 2492-2502
9. Zhang, F., Hogue, D. L., Liu, L., Fisher, C. L., Hui, D., Childs, S., and Ling, V. (2000) FEBS Lett. 478, 89-94
10. Chloupkova, M., LeBard, L. S., and Koeller, D. M. (2003) J. Mol. Biol. 331, 155-165
11. Kispal, G., Csere, P., Prohl, C., and Lill, R. (1999) EMBO J. 18, 3981-3989
12. Uebel, S., Meyer, T. H., Kraas, W., Kienle, S., Jung, G., Wiesmüller, K. H., and Tampé, R. (1995) J. Biol. Chem. 270, 18512-18516
13. van der Sluis, E. O., Nouwen, N., and Driessen, A. J. (2002) FEBS Lett. 527, 159-165
14. Wach, A., Brachat, A., Pohlmann, R., and Philippsen, P. (1994) Yeast 10, 1793-1808
15. Wolfger, H., Mahe, Y., Parle-McDermott, A., Delahodde, A., and Kuchler, K. (1997) FEBS Lett. 418, 269-274
16. Miroux, B., and Walker, J. E. (1996) J. Mol. Biol. 260, 289-298
17. Baneyx, F., and Georgiou, G. (1990) J. Bacteriol. 172, 491-494
18. Jobling, M. G., and Holmes, R. K. (1990) Nucleic Acids Res. 18, 5315-5316
19. van der Laan, M., Houben, E. N., Nouwen, N., Luirink, J., and Driessen, A. J. (2001) EMBO Rep. 2, 519-523
20. de Ruyter, P. G., Kuipers, O. P., and de Vos, W. M. (1996) Appl. Environ. Microbiol. 62, 3662-3667
21. van der Does, C., de Keyzer, J., van der Laan, M., and Driessen, A. J. (2003) Methods Enzymol. 372, 86-98
22. Janas, E., Hofacker, M., Chen, M., Gompf, S., van der Does, C., and Tampé, R. (2003) J. Biol. Chem. 278, 26862-26869
23. Brachmann, C. B., Davies, A., Cost, G. J., Caputo, E., Li, J., Hieter, P., and Boeke, J. D. (1998) Yeast 14, 115-132
24. Sherman, F. (1991) Methods Enzymol. 194, 3-21
25. Meisinger, C., Sommer, T., and Pfanner, N. (2000) Anal. Biochem. 287, 339-342
26. Schagger, H. (2001) Methods Cell Biol. 65, 231-244
27. Cheng, Y., and Prusoff, W. H. (1973) Biochem. Pharmacol. 22, 3099-3108
28. Gorbulev, S., Abele, R., and Tampé, R. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 3732-3737
29. Chen, P. S., Toribara, T. Y., and Warner, H. (1956) Anal. Chem. 28, 1756-1758
30. Chen, M., Abele, R., and Tampé, R. (2003) J. Biol. Chem. 278, 29686-29692
31. Frank, J., Radermacher, M., Penczek, P., Zhu, J., Li, Y., Ladjadj, M., and Leith, A. (1996) J. Struct. Biol. 116, 190-199
32. Sorzano, C. O., Marabini, R., Velazquez-Muriel, J., Bilbao-Castro, J. R., Scheres, S. H., Carazo, J. M., and Pascual-Montano, A. (2004) J. Struct. Biol. 148, 194-204
33. Radermacher, M., Wagenknecht, T., Verschoor, A., and Frank, J. (1987) J. Microsc. 146, 113-136
34. Chang, G., and Roth, C. B. (2001) Science 293, 1793-1800
35. Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., and Ferrin, T. E. (2004) J. Comput. Chem. 25, 1605-1612
36. Ghaemmaghami, S., Huh, W. K., Bower, K., Howson, R. W., Belle, A., Dephoure, N., O'Shea, E. K., and Weissman, J. S. (2003) Nature 425, 737-741
37. Kunji, E. R., Slotboom, D. J., and Poolman, B. (2003) Biochim. Biophys. Acta 1610, 97-108
38. Meyers, S., Schauer, W., Balzi, E., Wagner, M., Goffeau, A., and Golin, J. (1992) Curr. Genet 21, 431-436
39. Wada, S., Niimi, M., Niimi, K., Holmes, A. R., Monk, B. C., Cannon, R. D., and Uehara, Y. (2002) J. Biol. Chem. 277, 46809-46821
40. Decottignies, A., Grant, A. M., Nichols, J. W., de Wet, H., McIntosh, D. B., and Goffeau, A. (1998) J. Biol. Chem. 273, 12612-12622
41. Margolles, A., Putman, M., van Veen, H. W., and Konings, W. N. (1999) Biochemistry 38, 16298-16306
42. Schägger, H., and Pfeiffer, K. (2000) EMBO J. 19, 1777-1783
43. van der Does, C., Presenti, C., Schulze, K., Dinkelaker, S., and Tampé, R. (2006) J. Biol. Chem. 281, 5694-5701
44. Wolters, J. C., Abele, R., and Tampé, R. (2005) J. Biol. Chem. 280, 23631-23636
45. Uebel, S., Kraas, W., Kienle, S., Wiesmüller, K. H., Jung, G., and Tampé, R. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 8976-8981
46. Detmers, F. J., Lanfermeijer, F. C., Abele, R., Jack, R. W., Tampé, R., Konings, W. N., and Poolman, B. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 12487-12492
47. Doeven, M. K., Abele, R., Tampé, R., and Poolman, B. (2004) J. Biol. Chem. 279, 32301-32307
48. Awayn, N. H., Rosenberg, M. F., Kamis, A. B., Aleksandrov, L. A., Riordan, J. R., and Ford, R. C. (2005) Biochem. Soc. Trans. 33, 996-999
49. Chami, M., Steinfels, E., Orelle, C., Jault, J. M., Di Pietro, A., Rigaud, J. L., and Marco, S. (2002) J. Mol. Biol. 315, 1075-1085
50. Ferreira-Pereira, A., Marco, S., Decottignies, A., Nader, J., Goffeau, A., and Rigaud, J. L. (2003) J. Biol. Chem. 278, 11995-11999
51. Rosenberg, M. F., Callaghan, R., Ford, R. C., and Higgins, C. F. (1997) J. Biol. Chem. 272, 10685-10694
52. Rosenberg, M. F., Mao, Q., Holzenburg, A., Ford, R. C., Deeley, R. G., and Cole, S. P. (2001) J. Biol. Chem. 276, 16076-16082
53. Velarde, G., Ford, R. C., Rosenberg, M. F., and Powis, S. J. (2001) J. Biol. Chem. 276, 46054-46063
54. Chang, G. (2003) J. Mol. Biol. 330, 419-430
55. Reyes, C. L., and Chang, G. (2005) Science 308, 1028-1031
56. Dawson, R. J., and Locher, K. P. (2006) Nature 443, 180-185
57. Ravaud, S., Do Cao, M. A., Jidenko, M., Ebel, C., Le Maire, M., Jault, J. M., Di Pietro, A., Haser, R., and Aghajari, N. (2006) Biochem. J. 395, 345-353
58. Doerrler, W. T., and Raetz, C. R. (2002) J. Biol. Chem. 277, 36697-36705
59. Chang, X. B., Hou, Y. X., and Riordan, J. R. (1997) J. Biol. Chem. 272, 30962-30968
60. Kuhnke, G., Neumann, K., Muhlenhoff, U., and Lill, R. (2006) Mol. Membr. Biol. 23, 173-184
61. Horn, C., Bremer, E., and Schmitt, L. (2003) J. Mol. Biol. 334, 403-419
62. Lapinski, P. E., Raghuraman, G., and Raghavan, M. (2003) J. Biol. Chem. 278, 8229-8237
63. Qu, Q., Russell, P. L., and Sharom, F. J. (2003) Biochemistry 42, 1170-1177
64. van der Does, C., Manting, E. H., Kaufmann, A., Lutz, M., and Driessen, A. J. (1998) Biochemistry 37, 201-210