메뉴 건너뛰기




Volumn 40, Issue 5, 2007, Pages 1389-1397

A tryptophan residue is identified in the substrate binding of penicillin G acylase from Kluyvera citrophila

Author keywords

Fluorescence measurement; K. citrophila; Penicillin G acylase; Sequence alignment; Substrate docking; Tryptophan modification

Indexed keywords

FLUORESCENCE MEASUREMENT; K. CITROPHILA; PENICILLIN G ACYLASE; SEQUENCE ALIGNMENT; SUBSTRATE DOCKING; TRYPTOPHAN MODIFICATION;

EID: 33847637189     PISSN: 01410229     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.enzmictec.2006.10.022     Document Type: Article
Times cited : (6)

References (43)
  • 2
    • 0026086202 scopus 로고
    • The role of penicillin amidase in nature and in industry
    • Valle F., Balbus P., Marino P., and Bolivar F. The role of penicillin amidase in nature and in industry. TIBS 16 (1991) 36-40
    • (1991) TIBS , vol.16 , pp. 36-40
    • Valle, F.1    Balbus, P.2    Marino, P.3    Bolivar, F.4
  • 3
    • 0001081201 scopus 로고    scopus 로고
    • Penicillin acylase in the industrial production of β-lactam antibiotics
    • Bruggink A., Roos R., and De Vroom E. Penicillin acylase in the industrial production of β-lactam antibiotics. Org Proc Res Dev 2 (1998) 128-133
    • (1998) Org Proc Res Dev , vol.2 , pp. 128-133
    • Bruggink, A.1    Roos, R.2    De Vroom, E.3
  • 4
    • 3543148392 scopus 로고    scopus 로고
    • Improved beta-lactam acylases and their use as industrial biocatalysts
    • Sio C.F., and Quax W.J. Improved beta-lactam acylases and their use as industrial biocatalysts. Curr Opin Biotechnol 15 (2004) 349-355
    • (2004) Curr Opin Biotechnol , vol.15 , pp. 349-355
    • Sio, C.F.1    Quax, W.J.2
  • 5
    • 0025339217 scopus 로고
    • Expression, purification and crystallization of penicillin G acylase from Escherichia coli ATCC 11105
    • Hunt P.D., Tolley S.P., Ward R.J., Hill C.P., and Dodson G.G. Expression, purification and crystallization of penicillin G acylase from Escherichia coli ATCC 11105. Protein Eng 7 (1990) 635-639
    • (1990) Protein Eng , vol.7 , pp. 635-639
    • Hunt, P.D.1    Tolley, S.P.2    Ward, R.J.3    Hill, C.P.4    Dodson, G.G.5
  • 6
    • 0028358330 scopus 로고
    • The penicillin amidase of Arthrobacter viscosus (ATCC 15294)
    • Konstantinovic M., Marjanovic N., Ljubijankic G., and Glisin V. The penicillin amidase of Arthrobacter viscosus (ATCC 15294). Gene 143 (1994) 79-83
    • (1994) Gene , vol.143 , pp. 79-83
    • Konstantinovic, M.1    Marjanovic, N.2    Ljubijankic, G.3    Glisin, V.4
  • 7
    • 4544370797 scopus 로고    scopus 로고
    • Purification, substrate specificity, and N-terminal amino acid sequence analysis of a beta-lactamase-free penicillin amidase from Alcaligenes sp.
    • Das S., Gayen J.R., Pal A., Ghosh K., Rosazza J.P., and Samanta T.B. Purification, substrate specificity, and N-terminal amino acid sequence analysis of a beta-lactamase-free penicillin amidase from Alcaligenes sp. Appl Microbiol Biotechnol 65 (2004) 281-286
    • (2004) Appl Microbiol Biotechnol , vol.65 , pp. 281-286
    • Das, S.1    Gayen, J.R.2    Pal, A.3    Ghosh, K.4    Rosazza, J.P.5    Samanta, T.B.6
  • 8
    • 0242659253 scopus 로고    scopus 로고
    • Isolation and characterization of a new strain of Achromobacter sp. With beta-lactam antibiotic acylase activity
    • Plhackova K., Becka S., Skrob F., and Kyslik P. Isolation and characterization of a new strain of Achromobacter sp. With beta-lactam antibiotic acylase activity. Appl Microbiol Biotechnol 62 (2003) 507-516
    • (2003) Appl Microbiol Biotechnol , vol.62 , pp. 507-516
    • Plhackova, K.1    Becka, S.2    Skrob, F.3    Kyslik, P.4
  • 9
    • 0036242303 scopus 로고    scopus 로고
    • Inoculum studies in production of penicillin G acylase by Bacillus megaterium ATCC 14945
    • Pinotti L.M., Silva R.G., Giordano R.C., and Giordano R.L. Inoculum studies in production of penicillin G acylase by Bacillus megaterium ATCC 14945. Appl Biochem Biotechnol 98-100 (2002) 679-686
    • (2002) Appl Biochem Biotechnol , vol.98-100 , pp. 679-686
    • Pinotti, L.M.1    Silva, R.G.2    Giordano, R.C.3    Giordano, R.L.4
  • 10
    • 32644472256 scopus 로고    scopus 로고
    • Expression and purification of penicillin G acylase enzymes from four different micro-organisms, and a comparative evaluation of their synthesis/hydrolysis ratios for cephalexin
    • Cheng T., Chen M., Zheng H., Wang J., Yang S., and Jiang W. Expression and purification of penicillin G acylase enzymes from four different micro-organisms, and a comparative evaluation of their synthesis/hydrolysis ratios for cephalexin. Protein Expression Purif 46 (2006) 107-113
    • (2006) Protein Expression Purif , vol.46 , pp. 107-113
    • Cheng, T.1    Chen, M.2    Zheng, H.3    Wang, J.4    Yang, S.5    Jiang, W.6
  • 11
    • 0034951829 scopus 로고    scopus 로고
    • Expression and purification of extracellular penicillin G acylase in Bacillus subtilis
    • Yang S., Huang H., Zhang R., Huang X., Li S., and Yuan Z. Expression and purification of extracellular penicillin G acylase in Bacillus subtilis. Protein Expression Purif 21 (2001) 60-64
    • (2001) Protein Expression Purif , vol.21 , pp. 60-64
    • Yang, S.1    Huang, H.2    Zhang, R.3    Huang, X.4    Li, S.5    Yuan, Z.6
  • 13
    • 0026262142 scopus 로고
    • Enzyme reaction engineering: synthesis of antibiotics catalysed by stabilized penicillin G acylase in the presence of organic cosolvents
    • Fernandez-Lafuente R., Rosell C.M., and Guisan J.M. Enzyme reaction engineering: synthesis of antibiotics catalysed by stabilized penicillin G acylase in the presence of organic cosolvents. Enzyme Microb Technol. 13 (1991) 898-905
    • (1991) Enzyme Microb Technol. , vol.13 , pp. 898-905
    • Fernandez-Lafuente, R.1    Rosell, C.M.2    Guisan, J.M.3
  • 14
    • 0029760450 scopus 로고    scopus 로고
    • Dynamic reaction design of enzymic biotransformations in organic media: equilibrium-controlled synthesis of antibiotics by penicillin G acylase
    • Fernandez-Lafuente R., Rosell C.M., and Guisan J.M. Dynamic reaction design of enzymic biotransformations in organic media: equilibrium-controlled synthesis of antibiotics by penicillin G acylase. Biotechnol Appl Biochem 2 (1996) 139-143
    • (1996) Biotechnol Appl Biochem , vol.2 , pp. 139-143
    • Fernandez-Lafuente, R.1    Rosell, C.M.2    Guisan, J.M.3
  • 15
    • 33645401093 scopus 로고    scopus 로고
    • Effect of organic cosolvent on kinetic resolution of tert-leucine by penicillin G acylase from Kluyvera citrophila
    • Liu S.L., Wei D.Z., Song Q.X., Zhang Y.W., and Wang X.D. Effect of organic cosolvent on kinetic resolution of tert-leucine by penicillin G acylase from Kluyvera citrophila. Bioprocess Biosyst Eng 28 (2006) 285-289
    • (2006) Bioprocess Biosyst Eng , vol.28 , pp. 285-289
    • Liu, S.L.1    Wei, D.Z.2    Song, Q.X.3    Zhang, Y.W.4    Wang, X.D.5
  • 16
    • 0027909727 scopus 로고
    • Stabilization of heterodimeric enzyme by multipoint covalent immobilization: penicillin G acylase from Kluyvera citrophila
    • Guisan J.M., Alvaro G., Fernandez-Lafuente R., Rosell C.M., Garcia-Lopez J.L., and Tagliani A. Stabilization of heterodimeric enzyme by multipoint covalent immobilization: penicillin G acylase from Kluyvera citrophila. Biotechnol Bioeng 42 (1993) 455-464
    • (1993) Biotechnol Bioeng , vol.42 , pp. 455-464
    • Guisan, J.M.1    Alvaro, G.2    Fernandez-Lafuente, R.3    Rosell, C.M.4    Garcia-Lopez, J.L.5    Tagliani, A.6
  • 18
    • 0026598688 scopus 로고
    • Changing glycine 21 for glutamic acid in the β-subunit of penicillin G acylase from Kluyvera citrophila prevents protein maturation
    • Prieto I., Rodriduez M.C., Marquez G., Perez-Aranda A., and Barbero J.L. Changing glycine 21 for glutamic acid in the β-subunit of penicillin G acylase from Kluyvera citrophila prevents protein maturation. Appl Microbiol Biotechnol 36 (1992) 659-662
    • (1992) Appl Microbiol Biotechnol , vol.36 , pp. 659-662
    • Prieto, I.1    Rodriduez, M.C.2    Marquez, G.3    Perez-Aranda, A.4    Barbero, J.L.5
  • 19
    • 0028972449 scopus 로고
    • A protein catalytic framework with an N-terminal nucleophile is capable of self-activation
    • Brannigan J.A., Dodson G., Duggleby H.J., Moody P.C., Smith J.L., Tomchick D.R., et al. A protein catalytic framework with an N-terminal nucleophile is capable of self-activation. Nature 378 (1995) 416-419
    • (1995) Nature , vol.378 , pp. 416-419
    • Brannigan, J.A.1    Dodson, G.2    Duggleby, H.J.3    Moody, P.C.4    Smith, J.L.5    Tomchick, D.R.6
  • 21
    • 18844411385 scopus 로고    scopus 로고
    • Expression and overproduction of recombinant penicillin G acylase from Kluyvera citrophila in Escherichia coli
    • Wen Y., Feng M., Yuan Z., and Zhou P. Expression and overproduction of recombinant penicillin G acylase from Kluyvera citrophila in Escherichia coli. Enzyme Microb Technol 37 (2005) 233-237
    • (2005) Enzyme Microb Technol , vol.37 , pp. 233-237
    • Wen, Y.1    Feng, M.2    Yuan, Z.3    Zhou, P.4
  • 22
    • 5344220365 scopus 로고    scopus 로고
    • Expression, purification and characterization of His-tagged penicillin G acylase from Kluyvera citrophila in Escherichia coli
    • Wen Y., Shi X., Yuan Z., and Zhou P. Expression, purification and characterization of His-tagged penicillin G acylase from Kluyvera citrophila in Escherichia coli. Protein Expression Purif 38 (2004) 24-28
    • (2004) Protein Expression Purif , vol.38 , pp. 24-28
    • Wen, Y.1    Shi, X.2    Yuan, Z.3    Zhou, P.4
  • 23
    • 0026334245 scopus 로고
    • Chemical modification of serine at the active site of penicillin acylase from Kluyvera citrophila
    • Martin J., Mancheno J.M., and Arche R. Chemical modification of serine at the active site of penicillin acylase from Kluyvera citrophila. Biochem J 280 (1991) 659-662
    • (1991) Biochem J , vol.280 , pp. 659-662
    • Martin, J.1    Mancheno, J.M.2    Arche, R.3
  • 24
    • 0028172065 scopus 로고
    • Changing the substrate specificity of penicillin G acylase from Kluyvera citrophila through selective pressure
    • Roa A., Garcia-Lopez J.L., Salto F., and Cortes E. Changing the substrate specificity of penicillin G acylase from Kluyvera citrophila through selective pressure. Biochem J 303 (1994) 869-875
    • (1994) Biochem J , vol.303 , pp. 869-875
    • Roa, A.1    Garcia-Lopez, J.L.2    Salto, F.3    Cortes, E.4
  • 25
    • 0027155750 scopus 로고
    • Inactivation of penicillin acylase from Kluyvera citrophila by N-ethoxycarbonyl-2-ethoxy-1,2-dihydroquinoline: a case of time-dependent non-covalent enzyme inhibition
    • Martin J., Mancheno J.M., and Arche R. Inactivation of penicillin acylase from Kluyvera citrophila by N-ethoxycarbonyl-2-ethoxy-1,2-dihydroquinoline: a case of time-dependent non-covalent enzyme inhibition. Biochem J 291 (1993) 907-914
    • (1993) Biochem J , vol.291 , pp. 907-914
    • Martin, J.1    Mancheno, J.M.2    Arche, R.3
  • 26
    • 0032573516 scopus 로고    scopus 로고
    • Ligand-induced conformational change in penicillin acylase
    • Done S.H., Brannigan J.A., Moody P.C., and Hubbard R.E. Ligand-induced conformational change in penicillin acylase. J Mol Biol 284 (1998) 463-475
    • (1998) J Mol Biol , vol.284 , pp. 463-475
    • Done, S.H.1    Brannigan, J.A.2    Moody, P.C.3    Hubbard, R.E.4
  • 27
    • 21644465518 scopus 로고    scopus 로고
    • Evidence for the involvement of arginyl residue at the active site of penicillin G acylase from Kluyvera citrophila
    • Kumar R.S., Suresh C.G., PundleA, and Prabhune A. Evidence for the involvement of arginyl residue at the active site of penicillin G acylase from Kluyvera citrophila. Biotechnol Lett 26 (2004) 1601-1606
    • (2004) Biotechnol Lett , vol.26 , pp. 1601-1606
    • Kumar, R.S.1    Suresh, C.G.2    PundleA3    Prabhune, A.4
  • 28
    • 0002083389 scopus 로고
    • Evaluation and determination of 6-aminopenicillinic acid by p-dimethylbenzaldehyde
    • Shewale G.J., Kumar K.K., and Amberkar G.R. Evaluation and determination of 6-aminopenicillinic acid by p-dimethylbenzaldehyde. Biotechnol Technol 1 (1987) 69-72
    • (1987) Biotechnol Technol , vol.1 , pp. 69-72
    • Shewale, G.J.1    Kumar, K.K.2    Amberkar, G.R.3
  • 30
    • 77956994950 scopus 로고
    • Determination of the tryptophan content of proteins with N-bromosuccinimide
    • Spande T.F., and Witkop B. Determination of the tryptophan content of proteins with N-bromosuccinimide. Meth Enzymol 11 (1967) 498-506
    • (1967) Meth Enzymol , vol.11 , pp. 498-506
    • Spande, T.F.1    Witkop, B.2
  • 31
    • 0017288499 scopus 로고
    • Exposure of tryptophanyl residues in proteins. Quantitative determination by fluorescence quenching studies
    • Eftink M.R., and Ghiron A. Exposure of tryptophanyl residues in proteins. Quantitative determination by fluorescence quenching studies. Biochemistry 15 (1976) 672-680
    • (1976) Biochemistry , vol.15 , pp. 672-680
    • Eftink, M.R.1    Ghiron, A.2
  • 32
    • 0015230409 scopus 로고
    • Solute perturbation of protein fluorescence. The quenching of the tryptophanyl fluorescence of model compounds and of lysozyme by iodide ion
    • Lehrer S.S. Solute perturbation of protein fluorescence. The quenching of the tryptophanyl fluorescence of model compounds and of lysozyme by iodide ion. Biochemistry 10 (1971) 3254-3263
    • (1971) Biochemistry , vol.10 , pp. 3254-3263
    • Lehrer, S.S.1
  • 33
    • 0032922193 scopus 로고    scopus 로고
    • SFCHECK: a unified set of procedure for evaluating the quality of macromolecular structure-factor data and their agreement with atomic model
    • Vagin A.A., Richelle J., and Wodak S.J. SFCHECK: a unified set of procedure for evaluating the quality of macromolecular structure-factor data and their agreement with atomic model. Acta Crystallogr D 55 (1999) 191-205
    • (1999) Acta Crystallogr D , vol.55 , pp. 191-205
    • Vagin, A.A.1    Richelle, J.2    Wodak, S.J.3
  • 34
    • 11144244970 scopus 로고    scopus 로고
    • Ph4Dock: pharmacophore-based protein-ligand docking
    • Goto J., Kataoka R., and Hirayama N. Ph4Dock: pharmacophore-based protein-ligand docking. J Med Chem 47 (2004) 6804-6811
    • (2004) J Med Chem , vol.47 , pp. 6804-6811
    • Goto, J.1    Kataoka, R.2    Hirayama, N.3
  • 36
    • 0023829903 scopus 로고
    • DNA Strider: a 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers
    • Marck C. DNA Strider: a 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers. Nucl Acids Res 16 (1988) 1829-1836
    • (1988) Nucl Acids Res , vol.16 , pp. 1829-1836
    • Marck, C.1
  • 37
    • 0032961270 scopus 로고    scopus 로고
    • ESPript: analysis of multiple sequence alignments in PostScript
    • Gouet P., Courcelle E., Stuart D.I., and Metoz F. ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 15 (1999) 305-308
    • (1999) Bioinformatics , vol.15 , pp. 305-308
    • Gouet, P.1    Courcelle, E.2    Stuart, D.I.3    Metoz, F.4
  • 38
    • 0035850792 scopus 로고    scopus 로고
    • Crystal structures of penicillin acylase enzyme-substrate complexes: structural insights into the catalytic mechanism
    • McVey C.E., Walsh M.A., Dodson G.G., Wilson K.S., and Brannigan J.A. Crystal structures of penicillin acylase enzyme-substrate complexes: structural insights into the catalytic mechanism. J Mol Biol 313 (2001) 139-150
    • (2001) J Mol Biol , vol.313 , pp. 139-150
    • McVey, C.E.1    Walsh, M.A.2    Dodson, G.G.3    Wilson, K.S.4    Brannigan, J.A.5
  • 39
    • 9644252999 scopus 로고    scopus 로고
    • Increasing the synthetic performance of penicillin acylase PAS2 by structure-inspired semi-random mutagenesis
    • Gabor E.M., and Janssen D.B. Increasing the synthetic performance of penicillin acylase PAS2 by structure-inspired semi-random mutagenesis. Protein Eng Des Sel 17 (2004) 571-579
    • (2004) Protein Eng Des Sel , vol.17 , pp. 571-579
    • Gabor, E.M.1    Janssen, D.B.2
  • 40
    • 0032884396 scopus 로고    scopus 로고
    • Crystal structure of Penicillin G acylase from the Bro1 mutant strain of Providencia rettgeri
    • McDonough M.A., Klei H.E., and Kelly J.A. Crystal structure of Penicillin G acylase from the Bro1 mutant strain of Providencia rettgeri. Protein Sci 8 (1999) 1971-1981
    • (1999) Protein Sci , vol.8 , pp. 1971-1981
    • McDonough, M.A.1    Klei, H.E.2    Kelly, J.A.3
  • 41
    • 0020712689 scopus 로고
    • Chemical modification of Escherichia coli penicillin acylase I tryptophan involvement at the catalytic site
    • Mahajan P.B., and Borkar P.S. Chemical modification of Escherichia coli penicillin acylase I tryptophan involvement at the catalytic site. Hindustan Antibiotics Bull 25 (1983) 6-10
    • (1983) Hindustan Antibiotics Bull , vol.25 , pp. 6-10
    • Mahajan, P.B.1    Borkar, P.S.2
  • 42
    • 0036237518 scopus 로고    scopus 로고
    • The role of hydrophobic active site residues in substrate specificity and acyl transfer activity of penicillin acylase
    • Alkema W.B., Dijkhuis A.-J., de Vries E., and Janssen B. The role of hydrophobic active site residues in substrate specificity and acyl transfer activity of penicillin acylase. Eur J Biochem 269 (2002) 2093-2100
    • (2002) Eur J Biochem , vol.269 , pp. 2093-2100
    • Alkema, W.B.1    Dijkhuis, A.-J.2    de Vries, E.3    Janssen, B.4
  • 43
    • 33847659500 scopus 로고
    • Study of the active center topography of penicillin amidase from E. coli. II. The role of hydrophobicity in the specificity of the enzyme inhibition
    • Klyosov A.A., Svedas V.K., and Galaev I.Y. Study of the active center topography of penicillin amidase from E. coli. II. The role of hydrophobicity in the specificity of the enzyme inhibition. Bioorg Khim 3 (1977) 800-805
    • (1977) Bioorg Khim , vol.3 , pp. 800-805
    • Klyosov, A.A.1    Svedas, V.K.2    Galaev, I.Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.