Cis-motifs upstream of the transcription and translation initiation sites are effectively revealed by their positional disequilibrium in eukaryote genomes using frequency distribution curves

BMC Bioinformatics

Volumn 7, Issue , 2006, Pages

  Berendzen, Kenneth W ^a,b   Stüber, Kurt ^a   Harter, Klaus ^b   Wanke, Dierk ^a,b  

^a MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH   (Germany)

^b UNIVERSITY OF TÜBINGEN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACKGROUND FREQUENCIES; CIS-REGULATORY ELEMENTS; COMPUTATIONAL ANALYSIS; DROSOPHILA MELANOGASTER; FREQUENCY DISTRIBUTIONS; PATTERN SEARCH ALGORITHM; POSITION AND ORIENTATIONS; TRANSLATION INITIATION SITE;

PLANTS (BOTANY); YEAST;

TRANSCRIPTION;

ARABIDOPSIS; ARTICLE; CAENORHABDITIS ELEGANS; CONTROLLED STUDY; DNA BINDING MOTIF; DNA SEQUENCE; DROSOPHILA MELANOGASTER; EUKARYOTE; GENE LINKAGE DISEQUILIBRIUM; GENE MAPPING; GENETIC DATABASE; GENOME ANALYSIS; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PROMOTER REGION; REGULATORY SEQUENCE; SACCHAROMYCES CEREVISIAE; TATA BOX; TRANSCRIPTION REGULATION; TRANSLATION INITIATION; ALGORITHM; ANIMAL; BIOLOGY; COMPUTER PROGRAM; EUKARYOTIC CELL; GENOME; PROTEIN SYNTHESIS;

ARABIDOPSIS THALIANA; CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER; EUKARYOTA; SACCHAROMYCES CEREVISIAE;

DNA;

ALGORITHMS; ANIMALS; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; DNA; EUKARYOTIC CELLS; GENOME; PROMOTER REGIONS, GENETIC; PROTEIN BIOSYNTHESIS; REGULATORY ELEMENTS, TRANSCRIPTIONAL; SOFTWARE;

EID: 33845609562     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-522     Document Type: Article

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