PatSearch: A pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance

Bioinformatics

Volumn 16, Issue 5, 2000, Pages 439-450

  Pesole, Graziano ^a   Liuni, Sabino ^b   D'Souza, Mark ^c  

^a UNIVERSITY OF MILAN   (Italy)

^b CNR   (Italy)

^c ARGONNE NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE; MESSENGER RNA; NUCLEOTIDE; SELENOCYSTEINE;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPUTER PROGRAM; GENE CONTROL; GENE EXPRESSION REGULATION; GENE INSERTION SEQUENCE; IRON RESPONSIVE ELEMENT; MOLECULAR BIOLOGY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROBABILITY; SEQUENCE ANALYSIS; STATISTICAL ANALYSIS; TRANSCRIPTION REGULATION; UNINDEXED SEQUENCE; UNTRANSLATED REGION;

EID: 0033915990     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/16.5.439     Document Type: Article

References (11)

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5. Molecular control of vertebrate iron metabolism: mRNA-based regulatory circuits operated by iron, nitric oxide, and oxidative stress
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7. Identification of protein coding regions in genomic DNA
8. Progress in protein structure prediction: Assessment of CASP3
9. Statistical analysis of nucleotide sequences
10. Models for prediction and recognition of eukaryotic promoters
11. The sequence of the stem and flanking sequences at the 3' end of histone mRNA are critical determinants for the binding of the stem-loop binding protein