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Volumn 18, Issue 13, 2004, Pages 1606-1617

The MTE, a new core promoter element for transcription by RNA poymerase II

Author keywords

Core promoter; DPE; Inr; RNA polymerase II; TATA box

Indexed keywords

RNA POLYMERASE II;

EID: 3042784063     PISSN: 08909369     EISSN: None     Source Type: Journal    
DOI: 10.1101/gad.1193404     Document Type: Article
Times cited : (153)

References (35)
  • 1
    • 0036469065 scopus 로고    scopus 로고
    • Signal transduction and the control of gene expression
    • Brivanlou, A.H. and Darnell Jr., J.E. 2002. Signal transduction and the control of gene expression. Science 295: 813-818.
    • (2002) Science , vol.295 , pp. 813-818
    • Brivanlou, A.H.1    Darnell Jr., J.E.2
  • 2
    • 0029971668 scopus 로고    scopus 로고
    • Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters
    • Burke, T.W. and Kadonaga, J.T. 1996. Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters. Genes & Dev. 10: 711-724.
    • (1996) Genes & Dev. , vol.10 , pp. 711-724
    • Burke, T.W.1    Kadonaga, J.T.2
  • 3
    • 0030669466 scopus 로고    scopus 로고
    • The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila
    • -. 1997. The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila. Genes & Dev. 11: 3020-3031.
    • (1997) Genes & Dev. , vol.11 , pp. 3020-3031
  • 4
    • 0035477093 scopus 로고    scopus 로고
    • Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs
    • Butler, J.E.F. and Kadonaga, J.T. 2001. Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs. Genes & Dev. 15: 2515-2519.
    • (2001) Genes & Dev. , vol.15 , pp. 2515-2519
    • Butler, J.E.F.1    Kadonaga, J.T.2
  • 5
    • 0037108159 scopus 로고    scopus 로고
    • The RNA polymerase II core promoter: A key component in the regulation of gene expression
    • -. 2002. The RNA polymerase II core promoter: A key component in the regulation of gene expression. Genes & Dev. 16: 2583-2592.
    • (2002) Genes & Dev. , vol.16 , pp. 2583-2592
  • 6
  • 7
    • 0141752776 scopus 로고    scopus 로고
    • Core promoter elements and TAFs contribute to the diversity of transcriptional activation in vertebrates
    • Chen, Z. and Manley, J.L. 2003. Core promoter elements and TAFs contribute to the diversity of transcriptional activation in vertebrates. Mol. Cell. Biol. 23: 7350-7362.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 7350-7362
    • Chen, Z.1    Manley, J.L.2
  • 8
    • 0021100690 scopus 로고
    • Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei
    • Dignam, J.D., Lebovitz, R.M., and Roeder, R.G. 1983. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11: 1475-1489.
    • (1983) Nucleic Acids Res. , vol.11 , pp. 1475-1489
    • Dignam, J.D.1    Lebovitz, R.M.2    Roeder, R.G.3
  • 10
    • 0034659241 scopus 로고    scopus 로고
    • RNA polymerase II and the integration of nuclear events
    • Hirose, Y. and Manley, J.L. 2000. RNA polymerase II and the integration of nuclear events. Genes & Dev. 14: 1415-1429.
    • (2000) Genes & Dev. , vol.14 , pp. 1415-1429
    • Hirose, Y.1    Manley, J.L.2
  • 11
    • 0037948267 scopus 로고    scopus 로고
    • Diversified transcription initiation complexes expand promoter selectivity and tissue-specific gene expression
    • Hochheimer, A. and Tjian, R. 2003. Diversified transcription initiation complexes expand promoter selectivity and tissue-specific gene expression. Genes & Dev. 17: 1309-1320.
    • (2003) Genes & Dev. , vol.17 , pp. 1309-1320
    • Hochheimer, A.1    Tjian, R.2
  • 12
    • 0037201434 scopus 로고    scopus 로고
    • The DPE, a core promoter element for transcription by RNA polymerase II
    • Kadonaga, J.T. 2002. The DPE, a core promoter element for transcription by RNA polymerase II. Exp. Mol. Med. 34: 259-264.
    • (2002) Exp. Mol. Med. , vol.34 , pp. 259-264
    • Kadonaga, J.T.1
  • 13
    • 0842265974 scopus 로고    scopus 로고
    • Regulation of RNA polymerase II transcription by sequence-specific DNA-binding factors
    • -. 2004. Regulation of RNA polymerase II transcription by sequence-specific DNA-binding factors. Cell 116: 247-257.
    • (2004) Cell , vol.116 , pp. 247-257
  • 14
    • 0028345413 scopus 로고
    • Direct recognition of initiator elements by a component of the transcription factor IID complex
    • Kaufmann, J. and Smale, S.T. 1994. Direct recognition of initiator elements by a component of the transcription factor IID complex. Genes & Dev. 8: 821-829.
    • (1994) Genes & Dev. , vol.8 , pp. 821-829
    • Kaufmann, J.1    Smale, S.T.2
  • 15
    • 0000901898 scopus 로고    scopus 로고
    • Ligand- and cofactor-regulated transcription with chromatin templates
    • (ed. D. Picard). Oxford University Press, Oxford/New York
    • Kraus, W.L. and Kadonaga, J.T. 1999. Ligand- and cofactor-regulated transcription with chromatin templates. In Nuclear receptors: A practical approach (ed. D. Picard), pp. 167-189. Oxford University Press, Oxford/New York.
    • (1999) Nuclear Receptors: A Practical Approach , pp. 167-189
    • Kraus, W.L.1    Kadonaga, J.T.2
  • 16
    • 0034081817 scopus 로고    scopus 로고
    • The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters
    • Kutach, A.K. and Kadonaga, J.T. 2000. The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters. Mol. Cell. Biol. 20: 4754-4764.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 4754-4764
    • Kutach, A.K.1    Kadonaga, J.T.2
  • 17
    • 0031882652 scopus 로고    scopus 로고
    • New core promoter element in RNA polymerase II-dependent transcription: Sequence-specific DNA binding by transcription factor IIB
    • Lagrange, T., Kapanidis, A.N., Tang, H., Reinberg, D., and Ebright, R.H. 1998. New core promoter element in RNA polymerase II-dependent transcription: Sequence-specific DNA binding by transcription factor IIB. Genes & Dev. 12: 34-44.
    • (1998) Genes & Dev. , vol.12 , pp. 34-44
    • Lagrange, T.1    Kapanidis, A.N.2    Tang, H.3    Reinberg, D.4    Ebright, R.H.5
  • 18
    • 0034507632 scopus 로고    scopus 로고
    • Transcription of eukaryotic protein-coding genes
    • Lee, T.I. and Young, R.A. 2000. Transcription of eukaryotic protein-coding genes. Annu. Rev. Genet. 34: 77-137.
    • (2000) Annu. Rev. Genet. , vol.34 , pp. 77-137
    • Lee, T.I.1    Young, R.A.2
  • 19
    • 0037819447 scopus 로고    scopus 로고
    • Transcription regulation and animal diversity
    • Levine, M. and Tjian, R. 2003. Transcription regulation and animal diversity. Nature 424: 147-151.
    • (2003) Nature , vol.424 , pp. 147-151
    • Levine, M.1    Tjian, R.2
  • 20
    • 0037041395 scopus 로고    scopus 로고
    • An extensive network of coupling among gene expression machines
    • Maniatis, T. and Reed, R. 2002. An extensive network of coupling among gene expression machines. Nature 416: 499-506.
    • (2002) Nature , vol.416 , pp. 499-506
    • Maniatis, T.1    Reed, R.2
  • 21
    • 0033786937 scopus 로고    scopus 로고
    • Mediator of transcriptional regulation
    • Myers, L.C. and Kornberg, R.D. 2000. Mediator of transcriptional regulation. Annu. Rev. Biochem. 69: 729-749.
    • (2000) Annu. Rev. Biochem. , vol.69 , pp. 729-749
    • Myers, L.C.1    Kornberg, R.D.2
  • 23
    • 0033963681 scopus 로고    scopus 로고
    • cDNA cloning of the mammalian sterol C5-desaturase and the expression in a yeast mutant
    • Nishi, S., Nishino, H., and Ishibashi, T. 2000. cDNA cloning of the mammalian sterol C5-desaturase and the expression in a yeast mutant. Biochim. Biophys. Acta 1490: 106-108.
    • (2000) Biochim. Biophys. Acta , vol.1490 , pp. 106-108
    • Nishi, S.1    Nishino, H.2    Ishibashi, T.3
  • 24
    • 0012253746 scopus 로고    scopus 로고
    • Computational analysis of core promoters in the Drosophila genome
    • research0087.1-research0087.12
    • Ohler, U., Liao, G., Niemann, H., and Rubin, G.M. 2002. Computational analysis of core promoters in the Drosophila genome. Genome Biol. 3: research0087.1-research0087.12.
    • (2002) Genome Biol. , vol.3
    • Ohler, U.1    Liao, G.2    Niemann, H.3    Rubin, G.M.4
  • 25
    • 0037154982 scopus 로고    scopus 로고
    • A unified theory of gene expression
    • Orphanides, G. and Reinberg, D. 2002. A unified theory of gene expression. Cell 108: 439-451.
    • (2002) Cell , vol.108 , pp. 439-451
    • Orphanides, G.1    Reinberg, D.2
  • 26
    • 0028201744 scopus 로고
    • TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes
    • Purnell, B.A., Emanuel, P.A., and Gilmour, D.S. 1994. TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes. Genes & Dev. 8: 830-842.
    • (1994) Genes & Dev. , vol.8 , pp. 830-842
    • Purnell, B.A.1    Emanuel, P.A.2    Gilmour, D.S.3
  • 27
    • 0031579666 scopus 로고    scopus 로고
    • Transcription initiation from TATA-less promoters within eukaryotic protein-coding genes
    • Smale, S.T. 1997. Transcription initiation from TATA-less promoters within eukaryotic protein-coding genes. Biochim. Biophys. Acta 1351: 73-88.
    • (1997) Biochim. Biophys. Acta , vol.1351 , pp. 73-88
    • Smale, S.T.1
  • 28
    • 0035477896 scopus 로고    scopus 로고
    • Core promoters: Active contributors to combinatorial gene regulation
    • -. 2001. Core promoters: Active contributors to combinatorial gene regulation. Genes & Dev. 15: 2503-2508.
    • (2001) Genes & Dev. , vol.15 , pp. 2503-2508
  • 29
    • 0024557039 scopus 로고
    • The 'initiator' as a transcription control element
    • Smale, S.T. and Baltimore, D. 1989. The 'initiator' as a transcription control element. Cell 57: 103-113.
    • (1989) Cell , vol.57 , pp. 103-113
    • Smale, S.T.1    Baltimore, D.2
  • 30
    • 0043269205 scopus 로고    scopus 로고
    • The RNA polymerase II core promoter
    • Smale, S.T. and Kadonaga, J.T. 2003. The RNA polymerase II core promoter. Annu. Rev. Biochem. 72: 449-479.
    • (2003) Annu. Rev. Biochem. , vol.72 , pp. 449-479
    • Smale, S.T.1    Kadonaga, J.T.2
  • 31
    • 0023804820 scopus 로고
    • In vitro transcription of the Drosophila engrailed gene
    • Soeller, W.C., Poole, S.J., and Kornberg, T. 1988. In vitro transcription of the Drosophila engrailed gene. Genes & Dev. 2: 68-81.
    • (1988) Genes & Dev. , vol.2 , pp. 68-81
    • Soeller, W.C.1    Poole, S.J.2    Kornberg, T.3
  • 32
    • 0033538531 scopus 로고    scopus 로고
    • Fundamentally different logic of gene regulation in eukaryotes and prokaryotes
    • Struhl, K. 1999. Fundamentally different logic of gene regulation in eukaryotes and prokaryotes. Cell 98: 1-4.
    • (1999) Cell , vol.98 , pp. 1-4
    • Struhl, K.1
  • 33
    • 0035980732 scopus 로고    scopus 로고
    • Molecular cloning and structural analysis of human sterol C5 desaturase
    • Sugawara, T., Fujimoto, Y., and Ishibashi, T. 2001. Molecular cloning and structural analysis of human sterol C5 desaturase. Biochim. Biophys. Acta 1533: 277-284.
    • (2001) Biochim. Biophys. Acta , vol.1533 , pp. 277-284
    • Sugawara, T.1    Fujimoto, Y.2    Ishibashi, T.3
  • 34
    • 0028179052 scopus 로고
    • II150: Similarity to yeast gene TSM-1 and specific binding to core promoter DNA
    • II150: Similarity to yeast gene TSM-1 and specific binding to core promoter DNA. Science 264: 933-941.
    • (1994) Science , vol.264 , pp. 933-941
    • Verrijzer, C.P.1    Yokomori, K.2    Chen, J.-L.3    Tjian, R.4
  • 35
    • 0025675618 scopus 로고
    • Fractionation of the general RNA polymerase II transcription factors from Drosophila embryos
    • Wampler, S.L., Tyree, C.M., and Kadonaga, J.T. 1990. Fractionation of the general RNA polymerase II transcription factors from Drosophila embryos. J. Biol. Chem. 265: 21223-21231.
    • (1990) J. Biol. Chem. , vol.265 , pp. 21223-21231
    • Wampler, S.L.1    Tyree, C.M.2    Kadonaga, J.T.3


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