-
5
-
-
0141891817
-
-
Mustata, G. I.; Scares, T. A.; Briggs, J. M. Biopolymers 2003, 70, 186-200.
-
(2003)
Biopolymers
, vol.70
, pp. 186-200
-
-
Mustata, G.I.1
Scares, T.A.2
Briggs, J.M.3
-
7
-
-
0034816313
-
-
Ondrechen, M. J.; Briggs, J. M.; McCammon, J. A. J. Am. Chem. Soc. 2001, 123, 2830-2834.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 2830-2834
-
-
Ondrechen, M.J.1
Briggs, J.M.2
McCammon, J.A.3
-
10
-
-
0033548158
-
-
Watanabe, A.; Kurokawa, Y.; Yoshimura, T.; Kurihara, T.; Soda, K.; Esaki, N. J. Biol. Chem. 1999, 274, 4189-4194.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 4189-4194
-
-
Watanabe, A.1
Kurokawa, Y.2
Yoshimura, T.3
Kurihara, T.4
Soda, K.5
Esaki, N.6
-
11
-
-
0032775642
-
-
Watanabe, A.; Kurokawa, Y.; Yoshimura, T.; Esaki, N. J. Biochem. 1999, 125, 987-990.
-
(1999)
J. Biochem.
, vol.125
, pp. 987-990
-
-
Watanabe, A.1
Kurokawa, Y.2
Yoshimura, T.3
Esaki, N.4
-
12
-
-
0032757833
-
-
Watanabe, A.; Yoshimura, T.; Mikami, B.; Esaki, N. J. Biochem. 1999, 126, 781-786.
-
(1999)
J. Biochem.
, vol.126
, pp. 781-786
-
-
Watanabe, A.1
Yoshimura, T.2
Mikami, B.3
Esaki, N.4
-
14
-
-
2942654629
-
-
Spies, M. A.; Woodward, J. J.; Watnik, M. R.; Toney, M. D. J. Am. Chem. Soc. 2004, 126, 7464-7475.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 7464-7475
-
-
Spies, M.A.1
Woodward, J.J.2
Watnik, M.R.3
Toney, M.D.4
-
16
-
-
0037166337
-
-
Watanabe, A.; Yoshimura, T.; Mikami, B.; Hayashi, H.; Kagamiyama, H.; Esaki, N. J. Biol. Chem. 2002, 277, 19166-19172.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 19166-19172
-
-
Watanabe, A.1
Yoshimura, T.2
Mikami, B.3
Hayashi, H.4
Kagamiyama, H.5
Esaki, N.6
-
17
-
-
0031032448
-
-
Shaw, J. P.; Petsko, G. A.; Ringe, D. Biochemistry 1997, 36, 1329-1342.
-
(1997)
Biochemistry
, vol.36
, pp. 1329-1342
-
-
Shaw, J.P.1
Petsko, G.A.2
Ringe, D.3
-
18
-
-
0033574155
-
-
Morollo, A. A.; Petsko, G. A.; Ringe, D. Biochemistry 1999, 38, 3293-3301.
-
(1999)
Biochemistry
, vol.38
, pp. 3293-3301
-
-
Morollo, A.A.1
Petsko, G.A.2
Ringe, D.3
-
19
-
-
0034813704
-
-
Rios, A.; Crugeiras, J.; Amyes, T. L.; Richard, J. P. J. Am. Chem. Soc. 2001, 123, 7949-7950.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 7949-7950
-
-
Rios, A.1
Crugeiras, J.2
Amyes, T.L.3
Richard, J.P.4
-
23
-
-
13444274582
-
-
LeMagueres, P.; Im, H.; Ebalunode, J.; Strych, U.; Benedik, M. J.; Briggs, J. M.; Kohn, H.; Krause, K. L. Biochemistry 2005, 44, 1471-1481.
-
(2005)
Biochemistry
, vol.44
, pp. 1471-1481
-
-
Lemagueres, P.1
Im, H.2
Ebalunode, J.3
Strych, U.4
Benedik, M.J.5
Briggs, J.M.6
Kohn, H.7
Krause, K.L.8
-
24
-
-
0033591876
-
-
Bach, R. D.; Canepa, C.; Glukhovtsev, M. N. J. Am. Chem. Soc. 1999, 121, 6542-6555.
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 6542-6555
-
-
Bach, R.D.1
Canepa, C.2
Glukhovtsev, M.N.3
-
26
-
-
33745656984
-
-
Major, D. T.; Nam, K.; Gao, J. L. J. Am. Chem. Soc. 2006, 128, 8114-8115.
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 8114-8115
-
-
Major, D.T.1
Nam, K.2
Gao, J.L.3
-
27
-
-
84986512474
-
-
Brooks, B. R.; Bruccoleri, R. E.; Olafson, B. D.; States, D. J.; Swaminathan, S.; Karplus, M. J. Comput. Chem. 1983, 4, 187-217.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
28
-
-
84962367344
-
-
Lipkowitz, K. B., Boyd, D. B., Eds.; VCH: New York
-
Gao, J. In Reviews in Computational Chemistry; Lipkowitz, K. B., Boyd, D. B., Eds.; VCH: New York, 1995; Vol. 7, pp 119-185.
-
(1995)
Reviews in Computational Chemistry
, vol.7
, pp. 119-185
-
-
Gao, J.1
-
30
-
-
0000411659
-
-
Gao, J.; Amara, P.; Alhambra, C.; Field, M. J. J. Phys. Chem. A 1998, 102, 4714-4721.
-
(1998)
J. Phys. Chem. A
, vol.102
, pp. 4714-4721
-
-
Gao, J.1
Amara, P.2
Alhambra, C.3
Field, M.J.4
-
31
-
-
0034375393
-
-
Amara, P.; Field, M. J.; Alhambra, C.; Gao, J. Theor. Chem. Acc. 2000, 104, 336-343.
-
(2000)
Theor. Chem. Acc.
, vol.104
, pp. 336-343
-
-
Amara, P.1
Field, M.J.2
Alhambra, C.3
Gao, J.4
-
32
-
-
0842341771
-
-
Dewar, M. J. S.; Zoebisch, E. G.; Healy, E. F.; Stewart, J. J. P. J. Am. Chem. Soc. 1985. 107, 3902-3909.
-
(1985)
J. Am. Chem. Soc.
, vol.107
, pp. 3902-3909
-
-
Dewar, M.J.S.1
Zoebisch, E.G.2
Healy, E.F.3
Stewart, J.J.P.4
-
36
-
-
0345491105
-
-
Lee, C.; Yang, W.; Parr, R. G. Phys. Rev. B 1988, 37, 785-789.
-
(1988)
Phys. Rev. B
, vol.37
, pp. 785-789
-
-
Lee, C.1
Yang, W.2
Parr, R.G.3
-
38
-
-
33751119243
-
-
Giese, T. J.; Sherer, E. C.; Cramer, C. J.; York, D. M. J. Chem. Theory Comput. 2005, 1, 1275-1285.
-
(2005)
J. Chem. Theory Comput.
, vol.1
, pp. 1275-1285
-
-
Giese, T.J.1
Sherer, E.C.2
Cramer, C.J.3
York, D.M.4
-
40
-
-
0004016501
-
-
Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W.; Klein, M. L. J. Chem. Phys. 1983, 79, 926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
44
-
-
0000087970
-
-
Hooft, R. W. W.; van Eijck, B. P.; Kroon, J. J. Chem. Phys. 1992, 97, 6690-6694.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 6690-6694
-
-
Hooft, R.W.W.1
Van Eijck, B.P.2
Kroon, J.3
-
45
-
-
84986519238
-
-
Kumar, S.; Bouzida, D.; Swendsen, R. H.; Kollman, P. A.; Rosenberg, J. M. J. Comput. Chem. 1992, 13, 1011-1021.
-
(1992)
J. Comput. Chem.
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Bouzida, D.2
Swendsen, R.H.3
Kollman, P.A.4
Rosenberg, J.M.5
-
46
-
-
0022068152
-
-
Brooks, C. L., III; Brünger, A.; Karplus, M. Biopolymers 1985, 24, 843-865.
-
(1985)
Biopolymers
, vol.24
, pp. 843-865
-
-
Brooks III, C.L.1
Brünger, A.2
Karplus, M.3
-
48
-
-
33846823909
-
-
(a) Darden, T.; York, D. M.; Pedersen, I. J. Chem. Phys. 1993, 98, 10089-10092.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.M.2
Pedersen, I.3
-
49
-
-
19944369519
-
-
(b) Nam, K.; Gao, J.; York, D. M. J. Chem. Theory Comput. 2005, 1, 2-13.
-
(2005)
J. Chem. Theory Comput.
, vol.1
, pp. 2-13
-
-
Nam, K.1
Gao, J.2
York, D.M.3
-
50
-
-
36449007836
-
-
Feller, S, E.; Zhang, Y.; Pastor, R. W.; Brooks, B. R. J. Chem. Phys. 1995, 103, 4613-4621.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 4613-4621
-
-
Feller, S.E.1
Zhang, Y.2
Pastor, R.W.3
Brooks, B.R.4
-
52
-
-
33746911013
-
-
Major, D. T.; Garcia-Viloca, M.; Gao, J. J. Chem. Theory Comput. 2006, 2, 236-245.
-
(2006)
J. Chem. Theory Comput.
, vol.2
, pp. 236-245
-
-
Major, D.T.1
Garcia-Viloca, M.2
Gao, J.3
-
53
-
-
0035892157
-
-
Alhambra, C.; Corchado, J.; Sánchez, M. L.; Garcia-Viloca, M.; Gao, J.; Truhlar, D. G. J. Phys. Chem. B 2001, 105, 11326-11340.
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 11326-11340
-
-
Alhambra, C.1
Corchado, J.2
Sánchez, M.L.3
Garcia-Viloca, M.4
Gao, J.5
Truhlar, D.G.6
-
56
-
-
0000720458
-
-
Sprik, M.; Klein, M. L.; Chandler, D. Phys. Rev. B: Condens. Matter Mater. Phys. 1985, 31, 4234-4244.
-
(1985)
Phys. Rev. B: Condens. Matter Mater. Phys.
, vol.31
, pp. 4234-4244
-
-
Sprik, M.1
Klein, M.L.2
Chandler, D.3
-
57
-
-
0040193886
-
-
Hwang, J. K.; Chu, Z. T.; Yadav, A.; Warshel, A. J. Phys. Chem. 1991, 95, 8445-8448.
-
(1991)
J. Phys. Chem.
, vol.95
, pp. 8445-8448
-
-
Hwang, J.K.1
Chu, Z.T.2
Yadav, A.3
Warshel, A.4
-
59
-
-
33845581100
-
-
Manuscript in preparation
-
Major, D. T.; Gao, J. Manuscript in preparation.
-
-
-
Major, D.T.1
Gao, J.2
-
61
-
-
33748613208
-
-
Pu, J.; Gao, J.; Truhlar, D. G. Chem. Rev. 2006, 106, 3140-3169.
-
(2006)
Chem. Rev.
, vol.106
, pp. 3140-3169
-
-
Pu, J.1
Gao, J.2
Truhlar, D.G.3
-
62
-
-
0034605454
-
-
Rios, A.; Amyes, T. L.; Richard, J. P. J. Am. Chem. Soc. 2000, 122, 9373-9385.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 9373-9385
-
-
Rios, A.1
Amyes, T.L.2
Richard, J.P.3
-
67
-
-
0035861065
-
-
Billeter, S. R.; Webb, S. P.; Asarwal, P. K.; Iordanov, T.; Hammes-Schiffer, S. J. Am. Chem. Soc. 2001, 123, 11262-11272.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 11262-11272
-
-
Billeter, S.R.1
Webb, S.P.2
Asarwal, P.K.3
Iordanov, T.4
Hammes-Schiffer, S.5
-
71
-
-
0037472678
-
-
Garcia-Viloca, M.; Alhambra, C.; Truhlar, D. G.; Gao, J. L. J. Comput. Chem. 2003, 24, 177-190.
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 177-190
-
-
Garcia-Viloca, M.1
Alhambra, C.2
Truhlar, D.G.3
Gao, J.L.4
-
73
-
-
33644940104
-
-
Sharif, S.; Denisov, G. S.; Toney, M. D.; Limbach, H. H. J. Am. Chem. Soc. 2006, 128, 3375-3387.
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 3375-3387
-
-
Sharif, S.1
Denisov, G.S.2
Toney, M.D.3
Limbach, H.H.4
-
74
-
-
0041431075
-
-
Yow, G.-K.; Watanabe, A.; Yoshimura, T.; Esaki, N. J. Mol. Catal. B 2003, 23, 311-319.
-
(2003)
J. Mol. Catal. B
, vol.23
, pp. 311-319
-
-
Yow, G.-K.1
Watanabe, A.2
Yoshimura, T.3
Esaki, N.4
-
75
-
-
0025743628
-
-
Bash, P. A.; Field, M. J.; Davenport, R. C.; Petsko, G. A.; Ringe, D.; Karplus. M. Biochemists 1991, 30, 5826-5832.
-
(1991)
Karplus. M. Biochemists
, vol.30
, pp. 5826-5832
-
-
Bash, P.A.1
Field, M.J.2
Davenport, R.C.3
Petsko, G.A.4
Ringe, D.5
-
76
-
-
0344391945
-
-
Garcia-Viloca, M.; Truhlar, D. G.; Gao, J. Biochemistry 2003, 42, 13558-13575.
-
(2003)
Biochemistry
, vol.42
, pp. 13558-13575
-
-
Garcia-Viloca, M.1
Truhlar, D.G.2
Gao, J.3
-
77
-
-
11144235131
-
-
Hensen, C.; Hermann, J. C.; Nam, K.; Ma, S.; Gao, J.; Höltje, H. D. J. Med. Chem. 2004, 47, 6673-6680.
-
(2004)
J. Med. Chem.
, vol.47
, pp. 6673-6680
-
-
Hensen, C.1
Hermann, J.C.2
Nam, K.3
Ma, S.4
Gao, J.5
Höltje, H.D.6
-
78
-
-
0032446374
-
-
Kurokawa, Y.; Watanabe, A.; Yoshimura, T.; Esaki, N.; Soda, K. J. Biochem. 1998, 124, 1163-1169.
-
(1998)
J. Biochem.
, vol.124
, pp. 1163-1169
-
-
Kurokawa, Y.1
Watanabe, A.2
Yoshimura, T.3
Esaki, N.4
Soda, K.5
-
80
-
-
16844378698
-
-
Fenn, T. D.; Holyoak, T.; Stamper, G. F.; Ringe. D. Biochemistry 2005, 44, 5317-5327.
-
(2005)
Biochemistry
, vol.44
, pp. 5317-5327
-
-
Fenn, T.D.1
Holyoak, T.2
Stamper, G.F.3
Ringe, D.4
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