Engineering Escherichia coli for xylitol production from glucose-xylose mixtures

Biotechnology and Bioengineering

Volumn 95, Issue 6, 2006, Pages 1167-1176

  Cirino, Patrick C ^a   Chin, Jonathan W ^a   Ingram, Lonnie O ^b  

^a The Pennsylvania State University   (United States)

^b UNIVERSITY OF FLORIDA   (United States)

Author keywords

Biocatalysis; Catabolite repression; crp; Escherichia coli; Metabolic engineering; Xylitol; Xylitol dehydrogenase; Xylose reductase

Indexed keywords

BINARY MIXTURES; BIOCATALYSTS; CELLS; ENZYMES; GLUCOSE; METABOLISM;

CATABOLITE REPRESSION; CRP; METABOLIC ENGINEERING; XYLITOL; XYLITOL DEHYDROGENASE; XYLOSE REDUCTASE;

ESCHERICHIA COLI;

CYCLIC AMP RECEPTOR; GLUCOSE; OXIDOREDUCTASE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; XYLITOL; XYLITOL DEHYDROGENASE; XYLOSE REDUCTASE;

ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; CANDIDA BOIDINII; CANDIDA TENUIS; ENZYME ACTIVITY; ESCHERICHIA COLI; FERMENTATION; FUNGUS; GENE OVEREXPRESSION; GENETIC ENGINEERING; GENETIC SCREENING; GLUCONOBACTER OXYDANS; GLUCOSE METABOLISM; IN VIVO STUDY; NONHUMAN; PICHIA STIPITIS; SACCHAROMYCES CEREVISIAE;

BACTERIAL PROTEINS; BIOREACTORS; BIOTECHNOLOGY; CANDIDA; CATALYSIS; ESCHERICHIA COLI; FERMENTATION; GLUCOSE; MODELS, BIOLOGICAL; MODELS, CHEMICAL; PLASMIDS; PROTEIN ENGINEERING; XYLITOL; XYLOSE;

CANDIDA TENUIS; ESCHERICHIA COLI; GLUCONOBACTER OXYDANS; PICHIA STIPITIS;

EID: 33845441711     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.21082     Document Type: Article

References (55)

1. Bolen PL, McCracken DA. 1990. Properties of aldose reductase from the methanol yeast Candida boidinii. J Ferment Bioeng 69(4):211-214.
2. Cameron DC. 2005. 3-Hydroxypropionic acid: A new platform chemical from the biorefinery. Tenth Annual Meeting, Institute of Biological Engineering. Athens, Georgia.
3. Carvalho W, Silva SS, Converti A, Vitolo M. 2002. Metabolic behavior of immobilized Candida guilliermondii cells during batch xylitol production from sugarcane bagasse acid hydrolyzate. Biotechnol Bioeng 79(2):165-169.
4. Causey TB, Zhou S, Shanmugam KT, Ingram LO. 2003. Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redox-neutral and oxidized products: Homoacetate production. Proc Natl Acad Sci USA 100(3):825-832.
5. Chaillou S, Pouwels PH, Postma PW. 1999. Transport of D-xylose in Lactobacillus pentosus, Lactobacillus casei, and Lactobacillus plantarum: Evidence for a mechanism of facilitated diffusion via the phosphoenolpyruvate: mannose phosphotransferase system. J Bacteriol 181(16):4768-4773.
6. Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97(12):6640-6645.
7. Eppler T, Boos W. 1999. Glycerol-3-phosphate-mediated repression of malT in Escherichia coli does not require metabolism, depends on enzyme IIA(Glc) and is mediated by cAMP levels. Molec Microbiol 33(6):1221-1231.
8. Ford G, Ellis EM. 2001. Three aldo-keto seductases of the yeast Saccharomyces cerevisiae. Chem-Biol Interact 130:685-698.
9. Gosset G. 2005. Improvement of Escherichia coli production strains by modification of the phosphoenolpyruvate:sugar phosphotransferase system. Microb Cell Fact 4(1):14.
10. Hacker B, Habenicht A, Kiess M, Mattes R. 1999. Xylose utilisation: Cloning and characterisation of the xylose reductase from Candida tenais. Biological Chem 380(12):1395-1403.
11. Halborn J, Walfridsson M, Airaksinen U, Ojamo H, Hahnhagerdal B, Penttila M, Keranen S. 1991. Xylitol production by recombinant Saccharomyces cerevisiae. Bio-Technol 9:1090-1095.
12. Hasona A, Kim Y, Healy FG, Ingram LO, Shanmugam KT. 2004. Pyruvate formate lyase and acetate kinase are essential for anaerobic growth of Escherichia coli on xylose. J Bacteriol 186(22):7593-7600.
13. Hayn M, Steiner W, Klinger R, Steinmuller H, Sinner M, Esterbauer H. 1993. Basic research and pilot studies on the enzymatic conversion of lignocellulosics. In: Saddler J, editor. Bioconversion of forest and agricultural plant residues. Wallingford: CAB International. p 33-72.
14. Hernandez-Montalvo V, Valle F, Bolivar F, Gosset G. 2001. Characterization of sugar mixtures utilization by an Escherichia coli mutant devoid of the phosphotransferase system. Appl Microbiol Biotechnol 57(1-2):186-191.
15. Hernandez-Montalvo V, Martinez A, Hernandez-Chavez G, Bolivar F, Valle F, Gosset G. 2003. Expression of galP and glk in a Escherichia coli PTS mutant restores glucose transport and increases glycolytic flux to fermentation products. Biotechnol Bioeng 83(6):687-694.
16. Ingram LO, Aldrich HC, Borges ACC, Causey TB, Martinez A, Morales F, Saleh A, Underwood SA, Yomano LP, York SW, et al. 1999. Enteric bacterial catalysts for fuel ethanol production. Biotechnol Prog 15(5):855-866.
17. Jang SH, Kang HY, Kim GJ, Seo JH, Ryu YW. 2003. Complete In vitro conversion of D-xylose to xylitol by coupling xylose reductase and formate dehydrogenase. J Microbiol Biotechnol 13(4):501-508.
18. Jeong EY, Sopher C, Kim IS, Lee H. 2001. Mutational study of the role of tyrosine-49 in the Saccharomyces cerevisiae xylose reductase. Yeast 18:1081-1089.
19. Jin YS, Jeffries TW. 2003. Changing flux of xylose metabolites by altering expression of xylose reductase and xylitol dehydrogenase in recombinant Saccharomyces cerevisiae. Appl Biochem Biotechnol 105:277-285.
20. Kang MH, Ni HY, Jeffries TW. 2003. Molecular characterization of a gene for aldose reductase (CbXYL1) from Candida boidinii and its expression in Saccharomyces cerevisiae. Appl Biochem Biotechnol 105:265-276.
21. Kastner JR, Eiteman MA, Lee SA. 2003. Effect of redox potential on stationary-phase xylitol fermentations using Candida tropicalis. Appl Microbiol Biotechnol 63(1):96-100.
22. Kim TB, Oh DK. 2003. Xylitol production by Candida tropicalis in a chemically defined medium. Biotechnol Lett 25(24):2085-2088.
23. Kim JH, Han KC, Koh YH, Ryu YW, Seo JH. 2002. Optimization of fed-batch fermentation for xylitol production by Candida tropicalis. J Ind Microbiol Biotechnol 29(1):16-19.
24. Kim TB, Lee YJ, Kim P, Kim CS, Oh DK. 2004. Increased xylitol production rate during long-term cell recycle fermentation of Candida tropicalis. Biotechnol Lett 26(8):623-627.
25. Lee WJ, Ryu YW, Seo JH. 2000. Characterization of two-substrate fermentation processes for xylitol production using recombinant Saccharomyces cerevisiae containing xylose reductase gene. Process Biochem 35(10):1199-1203.
26. Martinez-Morales F, Borges AC, Martinez K, Shanmugam KT, Ingram LO. 1999. Chromosomal integration of heterologous DNA in Escherichia coli with precise removal of markers and replicons used during construction. J Bacteriol 181(22):7143-7148.
27. Melaja A, Hamalainen L. 1977. U.S. Patent No. 4,008,285: Process for making xylitol. United States.
28. Miller JH. 1992. A short course in bacterial genetics: A laboratory manual and handbook for Escherichia coli and related bacteria. Cold Spring Harbor, NY: Cold Spring Harbor Press.
29. Nakamura CE, Whited GM. 2003. Metabolic engineering for the microbial production of 1,3-propanediol. Cur Opin Biotechnol 14(5):454-459.
30. Neidhardt FC, Curtiss R, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE, editors. 1996. Escherichia coli and Salmonella: Cellular and molecular biology. 2nd edition. Washington D.C.: ASM Press. p 206-216.
31. Nichols NN, Dien BS, Bothast RJ. 2001. Use of catabolite repression mutants for fermentation of sugar mixtures to ethanol. Appl Microbiol Biotechnol 56(1-2):120-125.
32. Nidetzky B, Neuhauser W, Haltrich D, Kulbe KD. 1996. Continuous enzymatic production of xylitol with simultaneous coenzyme regeneration in a charged membrane reactor. Biotechnol Bioeng 52(3):387-396.
33. Nigam P, Singh D. 1995. Processes for fermentative production of xylitol- a sugar substitute. Process Biochem 30(2):117-124.
34. Oh DK, Kim SY, Kim JH. 1998. Increase of xylitol production rate by controlling redox potential in Candida parapsilosis. Biotechnol Bioeng 58(4):440-444.
35. Parajo JC, Dominguez H, Dominguez JM. 1998a. Biotechnological production of xylitol. Part 1: Interest of xylitol and fundamentals of its biosynthesis. Bioresource Technol 65(3):191-201.
36. Parajo JC, Dominguez H, Dominguez JM. 1998b. Biotechnological production of xylitol. Part 2: Operation in culture media made with commercial sugars. Bioresource Technol 65(3):203-212.
37. Pepper T, Olinger PM. 1988. Xylitol in sugar-free confections. Food Technol 42(10):98.
38. Posfai G, Koob MD, Kirkpatrick HA, Blattner FR. 1997. Versatile insertion plasmids for targeted genome manipulations in bacteria: Isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome. J Bacteriol 179(13):4426-4428.
39. Rivas B, Torre P, Dominguez JM, Perego P, Converti A, Parajo JC. 2003. Carbon material and bioenergetic balances of xylitol production from corncobs by Debaryomyces hansenii. Biotechnol Prog 19(3):706-713.
40. Roca E, Meinander N, HahnHagerdal B. 1996. Xylitol production by immobilized recombinant Saccharomyces cerevisiae in a continuous packed-bed bioreactor. Biotechnol Bioeng 51(3):317-326.
41. Sambrook J, Russell DW. 2001. Molecular cloning: A laboratory manual. Cold Spring Harbor, NY: Cold Spring Harbor Press.
42. Sauer U, Canonaco F, Heri S, Perrenoud A, Fischer E. 2004. The soluble and membrane-bound transhydrogenases UdhA and PntAB have divergent functions in NADPH metabolism of Escherichia coli. J Biol Chem 279(8):6613-6619.
43. Snoep JL, Arfman N, Yomano LP, Fliege RK, Conway T, Ingram LO. 1994. Reconstruction of glucose uptake and phosphorylation in a glucose-negative mutant of Escherichia coli by using Zymomonas mobilis genes encoding the glucose facilitator protein and glucokinase. J Bacteriol 176(7):2133-2135.
44. Song SG, Park C. 1997. Organization and regulation of the D-xylose operons in Escherichia coli K-12: XylR acts as a transcriptional activator. J Bacteriol 179(22):7025-7032.
45. Stulke J, Hillen W. 1999. Carbon catabolite repression in bacteria. Curr Opin Microbiol 2(2):195-201.
46. Sugiyama M, Suzuki S, Tonouchi N, Yokozeki K. 2003. Cloning of the xylitol dehydrogenase gene from Gluconobacter oxydans and improved production of xylitol from D-arabitol. Biosci Biotech Bioch 67(3):584-591.
47. Suzuki S, Sugiyama M, Mihara Y, Hashiguchi K, Yokozeki K. 2002. Novel enzymatic method for the production of xylitol from D-arabitol by Gluconobacter oxydans. Biosci Biotech Bioch 66(12):2614-2620.
48. Vandeska E, Amartey S, Kuzmanova S, Jeffries TW. 1996. Fed-batch culture for xylitol production by Candida boidinii. Process Biochem 31(3):265-270.
49. Wallon AZ, Stewart JD. 2004. Understanding and improving NADPH-dependent reactions by nongrowing Escherichia coli cells. Biotechnol Prog 20(2):403-411.
50. Werpy T, Peterson G, Aden A, Bozell J, Holladay J, White J, Manheim A. 2004. Top value added chemicals from biomass, Volume I: Results of screening for potential candidates from sugars and synthesis gas. U.S. Department of Energy.
51. Winkelhausen E, Kuzmanova S. 1998. Microbial conversion of D-xylose to xylitol. J Ferment Bioeng 86(1):1-14.
52. Wolfe AJ. 2005. The acetate switch. Microbiol Mol Biol R 69(1):12-50.
53. Wu TT. 1976. Growth of a mutant of Escherichia coli K-12 on xylitol by recruiting enzymes for D-xylose and L1,2-propanediol metabolism. Biochim Biophys Acta 428(3):656-663.
54. Yahashi Y, Horitsu H, Kawai K, Suzuki T, Takamizawa K. 1996. Production of xylitol from D-xylose by Candida tropicalis: The effect of D-glucose feeding. J Ferment Bioeng 81(2):148-152.
55. Yoshitake J, Ishizaki H, Shimamura M, Imai T. 1973. Xyltol production by an Enterobacter species. Agr Biol Chem 37:2261-2267.