-
1
-
-
0030207565
-
Instability of quartet analyses of molecular sequence data by the maximum likelihood method: The Cetacea/Artiodactyla relationships
-
Adachi, J. & Hasegawa, M. (1996) Instability of quartet analyses of molecular sequence data by the maximum likelihood method: The Cetacea/ Artiodactyla relationships. Mol. Phylogenet. Evol. 1, 72-76.
-
(1996)
Mol. Phylogenet. Evol.
, vol.1
, pp. 72-76
-
-
Adachi, J.1
Hasegawa, M.2
-
2
-
-
0037526102
-
1 G37) methyltransferase: Insights into tRNA recognition
-
Ahn, H.J., Kim, H.W., Yoon, H.J., Lee, B., Suh, S.S. & Yang, J.K. (2003) Crystal structure of tRNA (m 1 G37) methyltransferase: Insights into tRNA recognition. EMBO J. 22, 2593-2603.
-
(2003)
EMBO J.
, vol.22
, pp. 2593-2603
-
-
Ahn, H.J.1
Kim, H.W.2
Yoon, H.J.3
Lee, B.4
Suh, S.S.5
Yang, J.K.6
-
3
-
-
0036132209
-
SPOUT: A class of methyltransferases that includes spoU and trmD RNA methylase superfamilies, and novel superfamilies of predicted prokaryotic RNA methylases
-
Anantharaman, V., Koonin, E.V. & Aravind, L. (2002) SPOUT: A class of methyltransferases that includes spoU and trmD RNA methylase superfamilies, and novel superfamilies of predicted prokaryotic RNA methylases. J. Mol. Microbiol. Biotechnol. 4, 71-75.
-
(2002)
J. Mol. Microbiol. Biotechnol.
, vol.4
, pp. 71-75
-
-
Anantharaman, V.1
Koonin, E.V.2
Aravind, L.3
-
4
-
-
0142147324
-
The Saccharomyces cerevisiae U2 snRNA: Pseudouridine-synthase Pus7p is a novel multisite-multisubstrate RNA: Psi-synthase also acting on tRNAs
-
Behm-Ansmant, I., Urban, A. & Ma, X., Yu Y.T., Motorin, Y. & Branlant, C. (2003) The Saccharomyces cerevisiae U2 snRNA: pseudouridine-synthase Pus7p is a novel multisite-multisubstrate RNA: Psi-synthase also acting on tRNAs. RNA 9, 1371-1382.
-
(2003)
RNA
, vol.9
, pp. 1371-1382
-
-
Behm-Ansmant, I.1
Urban, A.2
Ma, X.3
Yu, Y.T.4
Motorin, Y.5
Branlant, C.6
-
5
-
-
85054214571
-
The role of modified nucleosides in tRNA interactions
-
D.L. Hatfield and B.J. Lee and R.M. Pirtle CRC Press Boca Raton, FL
-
Björk, G.R. (1992) The role of modified nucleosides in tRNA interactions. In: Transfer RNA in Protein Synthesis (eds D.L. Hatfield, B.J. Lee & R.M. Pirtle), pp. 23-85, Boca Raton, FL: CRC Press.
-
(1992)
Transfer RNA in Protein Synthesis
, pp. 23-85
-
-
Björk, G.R.1
-
6
-
-
0002495140
-
Biosynthesis and function of modified nucleosides
-
D. Söll and U.L. RajBhandary ASM Press Washington, DC
-
Björk, G.R. (1995) Biosynthesis and function of modified nucleosides. In: TRNA: Structure, Biosynthesis and Function (eds D. Söll & U.L. RajBhandary), pp. 165-205. Washington, DC: ASM Press.
-
(1995)
TRNA: Structure, Biosynthesis and Function
, pp. 165-205
-
-
Björk, G.R.1
-
7
-
-
0024316220
-
Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine
-
Björk, G.R., Wikstrom, P.M. & Byström, A.S. (1989) Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine. Science 244, 986-989.
-
(1989)
Science
, vol.244
, pp. 986-989
-
-
Björk, G.R.1
Wikstrom, P.M.2
Byström, A.S.3
-
8
-
-
0035863196
-
A primordial tRNA modification required for the evolution of life?
-
Björk, G.R., Kerstin, J., Nilsson, K., Johansson, M.J.O., Byström, A.S. & Persson, O.P. (2001) A primordial tRNA modification required for the evolution of life? EMBO J. 20, 231-239.
-
(2001)
EMBO J.
, vol.20
, pp. 231-239
-
-
Björk, G.R.1
Kerstin, J.2
Nilsson, K.3
Johansson, M.J.O.4
Byström, A.S.5
Persson, O.P.6
-
10
-
-
0026800886
-
A phylogenetic analysis of Aquifex pyrophilus
-
Burggraf, S., Olsen, G.J., Stetter, K.O. & Woese, C.R. (1992) A phylogenetic analysis of Aquifex pyrophilus. Syst. Appl. Microbiol. 15, 353-356.
-
(1992)
Syst. Appl. Microbiol.
, vol.15
, pp. 353-356
-
-
Burggraf, S.1
Olsen, G.J.2
Stetter, K.O.3
Woese, C.R.4
-
11
-
-
0020362952
-
1G) methyltransferase in Escherichia coli K-12
-
1G) methyltransferase in Escherichia coli K-12. Mol. Gen. Genet. 188, 440-446.
-
(1982)
, vol.188
, pp. 440-446
-
-
Byström, A.S.1
Björk, G.R.2
-
13
-
-
0034043778
-
Election of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. (2000) Election of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 4, 540-552.
-
(2000)
Mol. Biol. Evol.
, vol.4
, pp. 540-552
-
-
Castresana, J.1
-
14
-
-
0032953571
-
The yeast Saccharomyces cerevisiae YDL112w ORF encodes the putative 2′-O-ribose methyltransferase catalyzing the formation of Gm18 in tRNAs
-
CavailIé, J., Chetouani, F. & Bachellerie, J.-P. (1999) The yeast Saccharomyces cerevisiae YDL112w ORF encodes the putative 2′-O-ribose methyltransferase catalyzing the formation of Gm18 in tRNAs. RNA 5, 66-81.
-
(1999)
RNA
, vol.5
, pp. 66-81
-
-
Cavaillé, J.1
Chetouani, F.2
Bachellerie, J.-P.3
-
16
-
-
0032568375
-
The complete genome of the hyperthermophilic bacterium Aquifex aeolicus
-
Deckert, G., Warren, P.V., Gaasterland, T., Young, W.G., Lenox, A.L., Graham, D.E., Overbeek, R., Snead, M.A., Keller, M., Aujay, M., Huber, R., Feldman, R.A., Short, J.M., Olsen, G.J. & Swanson, R.V. (1998) The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392, 353-358.
-
(1998)
Nature
, vol.392
, pp. 353-358
-
-
Deckert, G.1
Warren, P.V.2
Gaasterland, T.3
Young, W.G.4
Lenox, A.L.5
Graham, D.E.6
Overbeek, R.7
Snead, M.A.8
Keller, M.9
Aujay, M.10
Huber, R.11
Feldman, R.A.12
Short, J.M.13
Olsen, G.J.14
Swanson, R.V.15
-
17
-
-
0142216637
-
Insights into catalysis by a knotted TrmD tRNA methyltransferase
-
Elkins, P.A., Watts, J.M., Zalacain, M., van Thiel, A., Vitazka, P.R., Redlak, M., Andraos-Selim, C., Rastinejad, F. & Holmes, W.M. (2003) Insights into catalysis by a knotted TrmD tRNA methyltransferase. J. Mol. Biol. 333, 931-949.
-
(2003)
J. Mol. Biol.
, vol.333
, pp. 931-949
-
-
Elkins, P.A.1
Watts, J.M.2
Zalacain, M.3
van Thiel, A.4
Vitazka, P.R.5
Redlak, M.6
Andraos-Selim, C.7
Rastinejad, F.8
Holmes, W.M.9
-
18
-
-
0343665638
-
How translational accuracy influences reading frame maintenance
-
Farabaugh, P.J. & Björk, G.R. (1999) How translational accuracy influences reading frame maintenance. EMBO J. 18, 1427-1434.
-
(1999)
EMBO J.
, vol.18
, pp. 1427-1434
-
-
Farabaugh, P.J.1
Björk, G.R.2
-
19
-
-
0031084471
-
An alternating least squares approach to inferring phylogenies from pairwise distances
-
Felsenstein, J. (1997) An alternating least squares approach to inferring phylogenies from pairwise distances. Syst. Biol. 46, 101-111.
-
(1997)
Syst. Biol.
, vol.46
, pp. 101-111
-
-
Felsenstein, J.1
-
20
-
-
0342977551
-
Appendix 3: General properties of RNA-modifing and editing enzymes
-
H. Grosjean and R. Benne pp ASM Press Washington, DC In:
-
Garcia, G.R. & Goodenough-Lashhua, D.M. (1998) Appendix 3: General properties of RNA-modifing and editing enzymes. In: Modification and Editing of RNA (eds H. Grosjean & R. Benne), pp. 555-560. Washington, DC: ASM Press.
-
(1998)
Modification and Editing of RNA
, pp. 555-560
-
-
Garcia, G.R.1
Goodenough-Lashhua, D.M.2
-
21
-
-
0034815478
-
The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: Evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga-Flavobacterium-Bacteroides division
-
Griffiths, E. & Gupta, R.S. (2001) The use of signature sequences in different proteins to determine the relative branching order of bacterial divisions: Evidence that Fibrobacter diverged at a similar time to Chlamydia and the Cytophaga-Flavobacterium-Bacteroides division. Microbiology 147, 2611-2622.
-
(2001)
Microbiology
, vol.147
, pp. 2611-2622
-
-
Griffiths, E.1
Gupta, R.S.2
-
22
-
-
31144455457
-
Molecular signatures in protein sequences that are characteristics of the phylum Aquificae
-
Griffiths, E. & Gupta, R.S. (2006) Molecular signatures in protein sequences that are characteristics of the phylum Aquificae. Int. J. Syst. Evol. Microbiol. 56, 99-107.
-
(2006)
Int. J. Syst. Evol. Microbiol.
, vol.56
, pp. 99-107
-
-
Griffiths, E.1
Gupta, R.S.2
-
23
-
-
0025039614
-
Guanosine modifications in runoff transcripts of synthetic transfer RNA-Phe genes microinjected into Xenopus oocytes
-
Grosjean, H., Droogmans, L., Giegé, R. & Uhlenbeck, O.C. (1990) Guanosine modifications in runoff transcripts of synthetic transfer RNA-Phe genes microinjected into Xenopus oocytes. Biochim. Biophys. Acta 1050, 267-273.
-
(1990)
Biochim. Biophys. Acta
, vol.1050
, pp. 267-273
-
-
Grosjean, H.1
Droogmans, L.2
Giegé, R.3
Uhlenbeck, O.C.4
-
24
-
-
0025161479
-
Role of tRNA modification in translational fidelity
-
Hagervall, T.G., Ericson, J.U., Esberg, K.B., Li, J.N. & Björk, G.R. (1990) Role of tRNA modification in translational fidelity. Biochim. Biophys. Acta 1050, 263-266.
-
(1990)
Biochim. Biophys. Acta
, vol.1050
, pp. 263-266
-
-
Hagervall, T.G.1
Ericson, J.U.2
Esberg, K.B.3
Li, J.N.4
Björk, G.R.5
-
25
-
-
0027197551
-
Deficiency of 1-methylguanosine in tRNA from Salmonella typhimurium induces frameshifting by quadruplet translocation
-
Hagervall, T.G., Tuohy, T.M.F., Atkins, J.F. & Björk, G.R. (1993) Deficiency of 1-methylguanosine in tRNA from Salmonella typhimurium induces frameshifting by quadruplet translocation. J. Mol. Biol. 232, 756-765.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 756-765
-
-
Hagervall, T.G.1
Tuohy, T.M.F.2
Atkins, J.F.3
Björk, G.R.4
-
26
-
-
0020698678
-
Purification and characterization of transfer RNA (guanine-1) methyltransferase from Escherichia coli
-
Hjalmarsson, K.J., Byström, A.S. & Björk, G.R. (1983) Purification and characterization of transfer RNA (guanine-1) methyltransferase from Escherichia coli. J. Biol. Chem. 258, 1343-1351.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 1343-1351
-
-
Hjalmarsson, K.J.1
Byström, A.S.2
Björk, G.R.3
-
27
-
-
0026690885
-
Structural requirements for tRNA methylation. Action of Escherichia coli tRNA (guanosine-1) methyltransferase on tRNA Leu 1 structural variants
-
Holmes, W.M., Andraos-Selim, C., Roberts, I. & Wahab, S.Z. (1992) Structural requirements for tRNA methylation. Action of Escherichia coli tRNA (guanosine-1) methyltransferase on tRNA Leu 1 structural variants. J. Biol. Chem. 267, 13440-13445.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 13440-13445
-
-
Holmes, W.M.1
Andraos-Selim, C.2
Roberts, I.3
Wahab, S.Z.4
-
28
-
-
0028988345
-
1G methyltransferase interactions: Touching bases with structure
-
Holmes, W.M., Andraos-Selim, C. & Redlak, M. (1995) tRNA-m 1 G methyltransferase interactions: Touching bases with structure. Biochimie 77, 62-65.
-
(1995)
Biochimie
, vol.77
, pp. 62-65
-
-
Holmes, W.M.1
Andraos-Selim, C.2
Redlak, M.3
-
29
-
-
0024824294
-
Effects of modification of 4-thiouridine in E. coli tRNA (fMet) on its methyl acceptor activity by thermostable Gm-methylases
-
Hori, H., Saneyoshi, M., Kumagai, I., Miura, K. & Watanabe, K. (1989) Effects of modification of 4-thiouridine in E. coli tRNA (fMet) on its methyl acceptor activity by thermostable Gm-methylases. J. Biochem. 106, 798-802.
-
(1989)
J. Biochem.
, vol.106
, pp. 798-802
-
-
Hori, H.1
Saneyoshi, M.2
Kumagai, I.3
Miura, K.4
Watanabe, K.5
-
30
-
-
0032475871
-
Substrate recognition of tRNA (Guanosine-2′-)-methyltransferase from Thermus thermophilus HB27
-
Hori, H., Yamazaki, N., Matsumoto, T., Watanabe, Y., Ueda, T., Nishikawa, K., Kumagai, I. & Watanabe, K. (1998) Substrate recognition of tRNA (Guanosine-2′-)-methyltransferase from Thermus thermophilus HB27. J. Biol. Chem. 273, 25721-25727.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 25721-25727
-
-
Hori, H.1
Yamazaki, N.2
Matsumoto, T.3
Watanabe, Y.4
Ueda, T.5
Nishikawa, K.6
Kumagai, I.7
Watanabe, K.8
-
31
-
-
0036206498
-
Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: Domain structure and conserved amino acid sequence motifs
-
Hori, H., Suzuki, T., Sugawara, K., Inoue, Y., Shibata, T., Kuramitsu, S., Yokoyama, S., Oshima, T. & Watanabe, K. (2002) Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: Domain structure and conserved amino acid sequence motifs. Genes Cells 7, 259-272.
-
(2002)
Genes Cells
, vol.7
, pp. 259-272
-
-
Hori, H.1
Suzuki, T.2
Sugawara, K.3
Inoue, Y.4
Shibata, T.5
Kuramitsu, S.6
Yokoyama, S.7
Oshima, T.8
Watanabe, K.9
-
32
-
-
0042591322
-
Aquifex aeolicus tRNA (Gm18) methyltransferase has unique substrate specificity. tRNA recognition mechanism of the enzyme
-
Hori, H., Kubota, S., Watanabe, K., Kim, J.M., Ogasawara, T., Sawasaki, T. & Endo, Y. (2003) Aquifex aeolicus tRNA (Gm18) methyltransferase has unique substrate specificity. tRNA recognition mechanism of the enzyme. J. Biol. Chem. 278, 25081-25090.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 25081-25090
-
-
Hori, H.1
Kubota, S.2
Watanabe, K.3
Kim, J.M.4
Ogasawara, T.5
Sawasaki, T.6
Endo, Y.7
-
33
-
-
0037415690
-
Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: Implication for tRNA sorting mechanism
-
Kaneko, T., Suzuki, T., Kapushoc, S.T., Rubio, M.A., Ghazvini, J., Watanabe, K., Simpson, L. & Suzuki, T. (2003) Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: Implication for tRNA sorting mechanism. EMBO J. 22, 657-667.
-
(2003)
EMBO J.
, vol.22
, pp. 657-667
-
-
Kaneko, T.1
Suzuki, T.2
-
34
-
-
0028936082
-
Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography
-
Keith, G. (1995) Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography. Biochimie 77, 142-144.
-
(1995)
Biochimie
, vol.77
, pp. 142-144
-
-
Keith, G.1
-
35
-
-
0016143659
-
The nucleotide sequence of phenylalanine tRNA from Mycoplasma sp. (Kid)
-
Kimball, M.E., Szeto, K.S. & Söll, D. (1974) The nucleotide sequence of phenylalanine tRNA from Mycoplasma sp. (Kid). Nucleic Acids Res. 1, 1721-1732.
-
(1974)
Nucleic Acids Res.
, vol.1
, pp. 1721-1732
-
-
Kimball, M.E.1
Szeto, K.S.2
Söll, D.3
-
36
-
-
0031914957
-
Characterization of yeast protein Deg1 as pseudouridine synthase (Pus3) catalyzing the formation of psi 38 and psi 39 in tRNA anticodon loop
-
Lecointe, F., Simos, G., Sauer, A., Hurt, E.C., Motorin, Y. & Grosjean, H. (1998) Characterization of yeast protein Deg1 as pseudouridine synthase (Pus3) catalyzing the formation of psi 38 and psi 39 in tRNA anticodon loop. J. Biol. Chem. 273, 1316-1323.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 1316-1323
-
-
Lecointe, F.1
Simos, G.2
Sauer, A.3
Hurt, E.C.4
Motorin, Y.5
Grosjean, H.6
-
37
-
-
0344923796
-
1G37) methyltransferase from Salmonella typhimurium affect tRNA substrate specificity
-
1G37) methyltransferase from Salmonella typhimurium affect tRNA substrate specificity. RNA 5, 395-408.
-
(1999)
RNA
, vol.5
, pp. 395-408
-
-
Li, J.1
Björk, G.R.2
-
38
-
-
0141592367
-
1G37) methyltransferase from Aquifex aeolicus at 2.6 Åresolution: A novel methyltransferase fold
-
1G37) methyltransferase from Aquifex aeolicus at 2.6 Åresolution: A novel methyltransferase fold. Proteins 53, 326-328.
-
(2003)
, vol.53
, pp. 326-328
-
-
Liu, J.1
Wang, W.2
Shin, D.H.3
Yokota, H.4
Kim, R.5
Kim, S.-H.6
-
39
-
-
0025267908
-
Recognition sites of tRNA by a thermostable tRNA (guanosine-2′-)-methyltransferase from Thermus thermophilus HB27
-
Matsumoto, T., Nishikawa, K., Hori, H., Ohta, T., Miura, K. & Watanabe, K. (1990) Recognition sites of tRNA by a thermostable tRNA (guanosine-2′-)-methyltransferase from Thermus thermophilus HB27. J. Biochem. 107, 331-338.
-
(1990)
J. Biochem.
, vol.107
, pp. 331-338
-
-
Matsumoto, T.1
Nishikawa, K.2
Hori, H.3
Ohta, T.4
Miura, K.5
Watanabe, K.6
-
41
-
-
0001494356
-
Appendix 1: Chemical structure and classification of posttranscriptionally modified nucleosides in RNA
-
H. Grosjean and R. Benne pp ASM Press Washington, DC In
-
Motorin, Y. & Grosjean, H. (1998) Appendix 1: Chemical structure and classification of posttranscriptionally modified nucleosides in RNA. In: Modification and Editing of RNA (eds H. Grosjean & R. Benne), pp. 543-550. Washington, DC: ASM Press.
-
(1998)
Modification and Editing of RNA
, pp. 543-550
-
-
Motorin, Y.1
Grosjean, H.2
-
42
-
-
0032821744
-
5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: Identification of the gene and substrate specificity of the enzyme
-
5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: Identification of the gene and substrate specificity of the enzyme. RNA 5, 1105-1118.
-
(1999)
RNA
, vol.5
, pp. 1105-1118
-
-
Motorin, Y.1
Grosjean, H.2
-
43
-
-
0031870753
-
The yeast tRNA: Pseudouridine synthase Pus1p displays a multisite substrate specificity
-
Motorin, Y., Keith, G., Simon, C., Foiret, D., Simos, G., Hurt, E. & Grosjean, H. (1998) The yeast tRNA: Pseudouridine synthase Pus1p displays a multisite substrate specificity. RNA 4, 856-859.
-
(1998)
RNA
, vol.4
, pp. 856-859
-
-
Motorin, Y.1
Keith, G.2
Simon, C.3
Foiret, D.4
Simos, G.5
Hurt, E.6
Grosjean, H.7
-
44
-
-
0035997122
-
An enzyme with a deep trefoil knot for the active-site architecture
-
Nureki, O., Shirouzu, M., Hashimoto, K., Ishitani, R., Terada, T., Tamakoshi, M., Oshima, T., Chijimatsu, M., Takio, K., Vassylyev, D.G., Shibata, T., Inoue, Y., Kuramitsu, S. & Yokoyama, S. (2002) An enzyme with a deep trefoil knot for the active-site architecture. Acta Crystallogr. D Biol. Crystallogr. 58, 1129-1137.
-
(2002)
Acta Crystallogr. D Biol. Crystallogr.
, vol.58
, pp. 1129-1137
-
-
Nureki, O.1
Shirouzu, M.2
Hashimoto, K.3
Ishitani, R.4
Terada, T.5
Tamakoshi, M.6
Oshima, T.7
Chijimatsu, M.8
Takio, K.9
Vassylyev, D.G.10
Shibata, T.11
Inoue, Y.12
Kuramitsu, S.13
Yokoyama, S.14
-
45
-
-
1842607227
-
Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme
-
Nureki, O., Watanabe, K., Fukai, S., Ishii, R., Endo, Y., Hori, H. & Yokoyama, S. (2004) Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme. Structure 12, 593-602.
-
(2004)
Structure
, vol.12
, pp. 593-602
-
-
Nureki, O.1
Watanabe, K.2
Fukai, S.3
Ishii, R.4
Endo, Y.5
Hori, H.6
Yokoyama, S.7
-
47
-
-
1842404152
-
The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 2′-O-methyltransferase activity
-
Persson, B.C., Jager, G. & Gustafsson, C. (1997) The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 2′-O-methyltransferase activity. Nucleic Acids Res. 25, 4093-4097.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4093-4097
-
-
Persson, B.C.1
Jager, G.2
Gustafsson, C.3
-
48
-
-
0037007220
-
Trm7p catalyses the formation of two 2′-O-methylriboses in yeast tRNA anticodon loop
-
Pintard, L., Lecointe, F., Bujnicki, J.M., Bonnerot, C., Grosjean, H. & Lapeyre, B. (2002) Trm7p catalyses the formation of two 2′-O-methylriboses in yeast tRNA anticodon loop. EMBO J. 21, 1811-1820.
-
(2002)
EMBO J.
, vol.21
, pp. 1811-1820
-
-
Pintard, L.1
Lecointe, F.2
Bujnicki, J.M.3
Bonnerot, C.4
Grosjean, H.5
Lapeyre, B.6
-
49
-
-
0030811295
-
Interaction of tRNA with tRNA (guanosine-1) methyltransferase: Binding specificity determinants involve the dinucleotide G36pG37 and tertiary structure
-
Redlak, M., Andraos-Selim, C., Giegé. R., Florentz, C. & Holmes, W.M. (1997) Interaction of tRNA with tRNA (guanosine-1) methyltransferase: Binding specificity determinants involve the dinucleotide G36pG37 and tertiary structure. Biochemistry 36, 8699-8709.
-
(1997)
Biochemistry
, vol.36
, pp. 8699-8709
-
-
Redlak, M.1
Andraos-Selim, C.2
Giegé., R.3
Florentz, C.4
Holmes, W.M.5
-
50
-
-
0032918555
-
The RNA Modification Database: 1999 update
-
Rozenski, J., McCloskey, J.A. & Crain, P.F. (1999) The RNA Modification Database: 1999 update. Nucleic Acids Res. 27, 196-197.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 196-197
-
-
Rozenski, J.1
McCloskey, J.A.2
Crain, P.F.3
-
51
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
52
-
-
0036205377
-
TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt, H.A., Strimmer, K., Vingron, M. & von Haeseler, A. (2002) TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 3, 502-504.
-
(2002)
Bioinformatics
, vol.3
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
53
-
-
0031804156
-
Compilation of tRNA sequences and sequences of tRNA genes
-
Sprinzl, M., Horn, C., Brown, M., Ioudovitch, A. & Steinberg, S. (1998) Compilation of tRNA sequences and sequences of tRNA genes. Nucl eic Acids Res. 26, 148-153.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 148-153
-
-
Sprinzl, M.1
Horn, C.2
Brown, M.3
Ioudovitch, A.4
Steinberg, S.5
-
54
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. (1997) The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
55
-
-
15444370839
-
Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family
-
Watanabe, K., Nureki, O., Fukai, S., Ishii, R., Okamoto, H., Yokoyama, S., Endo, Y. & Hori, H. (2005) Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family. J. Biol. Chem. 280, 10368-10377.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 10368-10377
-
-
Watanabe, K.1
Nureki, O.2
Fukai, S.3
Ishii, R.4
Okamoto, H.5
Yokoyama, S.6
Endo, Y.7
Hori, H.8
-
56
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
-
Woese, C.R., Kandler, O. & Wheelis, M.L. (1990) Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl. Acad. Sci. USA 87, 4576-4579.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
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