-
1
-
-
0025346254
-
Transmembrane protein structure: Spin labeling of bacteriorhodopsin mutants
-
Altenbach, C., Marti, T., Khorana, H. G., and Hubbell, W. L. (1990) Transmembrane protein structure: spin labeling of bacteriorhodopsin mutants, Science 248, 1088-1092.
-
(1990)
Science
, vol.248
, pp. 1088-1092
-
-
Altenbach, C.1
Marti, T.2
Khorana, H.G.3
Hubbell, W.L.4
-
2
-
-
0031765520
-
Recent advances in site-directed spin labeling of proteins
-
Hubbell, W. L., Gross, A., Langen, R., and Lietzow, M. A. (1998) Recent advances in site-directed spin labeling of proteins, Curr. Opin. Struct. Biol. 8, 649-656.
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 649-656
-
-
Hubbell, W.L.1
Gross, A.2
Langen, R.3
Lietzow, M.A.4
-
3
-
-
0033812585
-
Identifying conformational changes with site-directed spin labeling
-
Hubbell, W. L., Cafiso, D. S., and Altenbach, C. (2000) Identifying conformational changes with site-directed spin labeling, Nat. Struct. Biol. 7, 735-739.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 735-739
-
-
Hubbell, W.L.1
Cafiso, D.S.2
Altenbach, C.3
-
5
-
-
0001579637
-
Double electron-electron resonance spin-echo modulation spectroscopic measurement of electron-spin pair separations in orientationally disordered solids
-
Larson, R. G., and Singel, D. J. (1993) Double electron-electron resonance spin-echo modulation spectroscopic measurement of electron-spin pair separations in orientationally disordered solids, J. Chem. Phys. 98, 5134-5146.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 5134-5146
-
-
Larson, R.G.1
Singel, D.J.2
-
6
-
-
0029115328
-
Determination of the distance between spin labels attached to a macromolecule
-
Rabenstein, M. D., and Shin, Y. K. (1995) Determination of the distance between spin labels attached to a macromolecule, Proc. Natl. Acad. Sci. U.S.A. 92, 8239-8243.
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 8239-8243
-
-
Rabenstein, M.D.1
Shin, Y.K.2
-
7
-
-
0031206837
-
Theory of double quantum two-dimensional electron spin resonance with application to distance measurements
-
Saxena, S., and Freed, J. H. (1997) Theory of double quantum two-dimensional electron spin resonance with application to distance measurements, J. Chem. Phys. 107, 1317-1340.
-
(1997)
J. Chem. Phys.
, vol.107
, pp. 1317-1340
-
-
Saxena, S.1
Freed, J.H.2
-
8
-
-
0032476844
-
Determination of end-to-end distances in a series of TEMPO diradicals of up to 2.8 nm length with a new four-pulse double electron electron resonance experiment
-
Martin, R. E., Pannier, M., Diederich, F., Gramlich, V., Hubrich, H., and Spiess, H. W. (1998) Determination of end-to-end distances in a series of TEMPO diradicals of up to 2.8 nm length with a new four-pulse double electron electron resonance experiment, Angew. Chem., Int. Ed. 37, 2834-2837.
-
(1998)
Angew. Chem., Int. Ed.
, vol.37
, pp. 2834-2837
-
-
Martin, R.E.1
Pannier, M.2
Diederich, F.3
Gramlich, V.4
Hubrich, H.5
Spiess, H.W.6
-
9
-
-
0001590048
-
Multiple quantum ESR and distance measurements
-
Borbat, P. P., and Freed, J. H. (1999) Multiple quantum ESR and distance measurements, Chem. Phys. Lett. 313, 145-154.
-
(1999)
Chem. Phys. Lett.
, vol.313
, pp. 145-154
-
-
Borbat, P.P.1
Freed, J.H.2
-
10
-
-
0001201352
-
Dipolar spectroscopy and spin alignment in electron paramagnetic resonance
-
Jeschke, G., Pannier, M., Godt, A., and Spiess, H. W. (2000) Dipolar spectroscopy and spin alignment in electron paramagnetic resonance, Chem. Phys. Lett. 331, 243-252.
-
(2000)
Chem. Phys. Lett.
, vol.331
, pp. 243-252
-
-
Jeschke, G.1
Pannier, M.2
Godt, A.3
Spiess, H.W.4
-
11
-
-
0034716774
-
Self-Assembling properties of membrane-modifying peptides studied by PELDOR and CW-ESR spectroscopies
-
Milov, A. D., Tsvetkov, Y. D., Formaggio, F., Crisma, M., Toniolo, C., and Raap, J. (2000) Self-Assembling properties of membrane-modifying peptides studied by PELDOR and CW-ESR spectroscopies, J. Am. Chem. Soc. 122, 3843-3848.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 3843-3848
-
-
Milov, A.D.1
Tsvetkov, Y.D.2
Formaggio, F.3
Crisma, M.4
Toniolo, C.5
Raap, J.6
-
12
-
-
0035846923
-
Electron spin resonance in studies of membranes and proteins
-
Borbat, P. P., Costa-Filho, A. J., Earle, K. A., Moscicki, J. K., and Freed, J. H. (2001) Electron spin resonance in studies of membranes and proteins, Science 291, 266-269.
-
(2001)
Science
, vol.291
, pp. 266-269
-
-
Borbat, P.P.1
Costa-Filho, A.J.2
Earle, K.A.3
Moscicki, J.K.4
Freed, J.H.5
-
13
-
-
0021093579
-
Use of the EPR half-field transition to determine the interspin distance and orientation of the interspin vector in systems of two unpaired electrons
-
Eaton, S. S., Moore, K. M., Sawant, B. M., and Eaton, G. R. (1983) Use of the EPR half-field transition to determine the interspin distance and orientation of the interspin vector in systems of two unpaired electrons, J. Am. Chem. Soc. 105, 6560-6567.
-
(1983)
J. Am. Chem. Soc.
, vol.105
, pp. 6560-6567
-
-
Eaton, S.S.1
Moore, K.M.2
Sawant, B.M.3
Eaton, G.R.4
-
14
-
-
0032985839
-
Nitroxide spin-spin interactions: Applications to protein structure and dynamics
-
Hustedt, E. J., and Beth, A. H. (1999) Nitroxide spin-spin interactions: Applications to protein structure and dynamics, Annu. Rev. Biophys. Biomol. Struct. 28, 129-153.
-
(1999)
Annu. Rev. Biophys. Biomol. Struct.
, vol.28
, pp. 129-153
-
-
Hustedt, E.J.1
Beth, A.H.2
-
15
-
-
0034294066
-
Determination of ion cluster sizes and cluster-to-cluster distances in ionomers by four-pulse double electron-electron resonance
-
Pannier, M., Schadler, V., Schops, M., Wiesner, U., Jeschke, G., and Spiess, H. W. (2000) Determination of ion cluster sizes and cluster-to-cluster distances in ionomers by four-pulse double electron-electron resonance, Macromolecules 33, 7812-7818.
-
(2000)
Macromolecules
, vol.33
, pp. 7812-7818
-
-
Pannier, M.1
Schadler, V.2
Schops, M.3
Wiesner, U.4
Jeschke, G.5
Spiess, H.W.6
-
16
-
-
0035951101
-
Estimation of inter-residue distances in spin labeled proteins at physiological temperatures: Experimental strategies and practical limitations
-
Altenbach, C., Oh, K.-J., Trabanino, R. J., Hideg, K., and Hubbell, W. L. (2001) Estimation of inter-residue distances in spin labeled proteins at physiological temperatures: Experimental strategies and practical limitations, Biochemistry 40, 15471-15482.
-
(2001)
Biochemistry
, vol.40
, pp. 15471-15482
-
-
Altenbach, C.1
Oh, K.-J.2
Trabanino, R.J.3
Hideg, K.4
Hubbell, W.L.5
-
17
-
-
0034836309
-
The secondary structure of a membrane-modifying peptide in a supramolecular assembly studied by PELDOR and CW-ESR spectroscopies
-
Milov, A. D., Tsvetkov, Y. D., Formaggio, F., Crisma, M., Toniolo, C., and Raap, J. (2001) The secondary structure of a membrane-modifying peptide in a supramolecular assembly studied by PELDOR and CW-ESR spectroscopies, J. Am. Chem. Soc. 123, 3784-3789.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 3784-3789
-
-
Milov, A.D.1
Tsvetkov, Y.D.2
Formaggio, F.3
Crisma, M.4
Toniolo, C.5
Raap, J.6
-
18
-
-
0034817286
-
Structure of the KcsA channel intracellular gate in the open state
-
Liu, Y.-S., Sompornpisut, P., and Perozo, E. (2001) Structure of the KcsA channel intracellular gate in the open state, Nat. Struct. Biol. 8, 883-887.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 883-887
-
-
Liu, Y.-S.1
Sompornpisut, P.2
Perozo, E.3
-
19
-
-
0037194760
-
Open channel structure of Mscl and the gating mechanism of mechanosensitive channels
-
Perozo, E., Cortes, D. M., Sompornpisut, P., Kloda, A., and Martinac, B. (2002) Open channel structure of Mscl and the gating mechanism of mechanosensitive channels, Nature 418, 942-948.
-
(2002)
Nature
, vol.418
, pp. 942-948
-
-
Perozo, E.1
Cortes, D.M.2
Sompornpisut, P.3
Kloda, A.4
Martinac, B.5
-
20
-
-
0037093869
-
Protein structure determination using long-distance constraints from double-quantum coherence ESR: Study of T4 lysozyme
-
Borbat, P. P., Mchourab, H. S., and Freed, J. H. (2002) Protein structure determination using long-distance constraints from double-quantum coherence ESR: Study of T4 lysozyme, J. Am. Chem. Soc. 124, 5304-5314.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 5304-5314
-
-
Borbat, P.P.1
Mchourab, H.S.2
Freed, J.H.3
-
21
-
-
0242669315
-
Nanometer distance measurements on RNA using PELDOR
-
Schiemann, O., Weber, A., Edwards, T., Prisner, T., and Sigurdsson, S. (2003) Nanometer distance measurements on RNA using PELDOR, J. Am. Chem. Soc. 125, 3434-3435.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 3434-3435
-
-
Schiemann, O.1
Weber, A.2
Edwards, T.3
Prisner, T.4
Sigurdsson, S.5
-
22
-
-
0038103601
-
Regulation of neuronal SNARE assembly by the membrane
-
Kweon, D.-H., Kim, C. S., and Shin, Y.-K. (2003) Regulation of neuronal SNARE assembly by the membrane, Nat. Struct. Biol. 10, 440-447.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 440-447
-
-
Kweon, D.-H.1
Kim, C.S.2
Shin, Y.-K.3
-
23
-
-
4544261371
-
Suppression of electron spin-echo envelope modulation peaks in double quantum coherence electron spin resonance
-
Bonora, M., Becker, J. S., and Saxena, S. (2004) Suppression of electron spin-echo envelope modulation peaks in double quantum coherence electron spin resonance, J. Magn. Reson. 170, 278-283.
-
(2004)
J. Magn. Reson.
, vol.170
, pp. 278-283
-
-
Bonora, M.1
Becker, J.S.2
Saxena, S.3
-
24
-
-
3042690165
-
Measurement of large distances in biomolecules using double-quantum filtered refocused electron spin-echoes
-
Borbat, P. P., Davis, J. H., Butcher, S. E., and Freed, J. H. (2004) Measurement of large distances in biomolecules using double-quantum filtered refocused electron spin-echoes, J. Am. Chem. Soc. 126, 7746-7747.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 7746-7747
-
-
Borbat, P.P.1
Davis, J.H.2
Butcher, S.E.3
Freed, J.H.4
-
25
-
-
2442571876
-
A PELDOR-based nanometer distance ruler for oligonucleotides
-
Schiemann, O., Piton, N., Mu, Y., Stock, G., Engels, J. W., and Prisner, T. F. (2004) A PELDOR-based nanometer distance ruler for oligonucleotides, J. Am. Chem. Soc. 126, 5722-5729.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 5722-5729
-
-
Schiemann, O.1
Piton, N.2
Mu, Y.3
Stock, G.4
Engels, J.W.5
Prisner, T.F.6
-
26
-
-
20444495341
-
Hemifusion in SNARE-mediated membrane fusion
-
Xu, Y., Zhang, F., Su, Z., McNew, J. A., and Shin, Y.-K. (2005) Hemifusion in SNARE-mediated membrane fusion, Nat. Struct. Mol. Biol. 12, 417-422.
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 417-422
-
-
Xu, Y.1
Zhang, F.2
Su, Z.3
McNew, J.A.4
Shin, Y.-K.5
-
27
-
-
0001253053
-
Oxygen permeability of phosphatidylcholine-cholesterol membranes
-
Subczynski, W. K., Hyde, J. S., and Kusumi, A. (1989) Oxygen permeability of phosphatidylcholine-cholesterol membranes, Proc. Natl Acad. Sci. U.S.A. 86, 4474-4478.
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 4474-4478
-
-
Subczynski, W.K.1
Hyde, J.S.2
Kusumi, A.3
-
28
-
-
0031203438
-
Multifrequency two-dimensional Fourier transform ESR: An X/Ku-band spectrometer
-
Borbat, P. P., Crepeau, R. H., and Freed, J. H. (1997) Multifrequency two-dimensional Fourier transform ESR: An X/Ku-band spectrometer, J. Magn. Reson. 127, 155-167.
-
(1997)
J. Magn. Reson.
, vol.127
, pp. 155-167
-
-
Borbat, P.P.1
Crepeau, R.H.2
Freed, J.H.3
-
29
-
-
0344406989
-
Molecular dynamics of 1-palmitoyl-2-oleoylphosphatidylcholine membranes containing transmembrane-helical peptides with alternating leucine and alanine residues
-
Subczynski, W. K., Pasenkiewicz-Gierula, M., McElhaney, R. N., Hyde, J. S., and Kusumi, A. (2003) Molecular dynamics of 1-palmitoyl-2- oleoylphosphatidylcholine membranes containing transmembrane-helical peptides with alternating leucine and alanine residues, Biochemistry 42, 3939-3948.
-
(2003)
Biochemistry
, vol.42
, pp. 3939-3948
-
-
Subczynski, W.K.1
Pasenkiewicz-Gierula, M.2
McElhaney, R.N.3
Hyde, J.S.4
Kusumi, A.5
-
30
-
-
0037380858
-
A 2D-ELDOR study of the liquid ordered phase in multilamellar vesicle membranes
-
Costa-Filho, A. J., Shimoyama, Y., and Freed, J. H. (2003) A 2D-ELDOR study of the liquid ordered phase in multilamellar vesicle membranes, Biophys. J. 84, 2619-2633.
-
(2003)
Biophys. J.
, vol.84
, pp. 2619-2633
-
-
Costa-Filho, A.J.1
Shimoyama, Y.2
Freed, J.H.3
-
31
-
-
0038636533
-
Lipid-gramicidin interactions: Dynamic structure of the boundary lipid by 2D-ELDOR
-
Costa-Filho, A. J., Crepeau, R. H., Borbat, P. P., Ge, M., and Freed, J. H. (2003) Lipid-gramicidin interactions: Dynamic structure of the boundary lipid by 2D-ELDOR, Biophys. J. 84, 3364-3378.
-
(2003)
Biophys. J.
, vol.84
, pp. 3364-3378
-
-
Costa-Filho, A.J.1
Crepeau, R.H.2
Borbat, P.P.3
Ge, M.4
Freed, J.H.5
-
32
-
-
1842713306
-
Nitroxide-relaxation over the entire motional range
-
Bonora, M., Pornsuwan, S., and Saxena, S. (2004) Nitroxide-relaxation over the entire motional range, J. Phys. Chem. B 108, 4196-4198.
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 4196-4198
-
-
Bonora, M.1
Pornsuwan, S.2
Saxena, S.3
-
33
-
-
18244390978
-
A ruler for determining the position of proteins in membranes
-
Nielsen, R. D., Che, K., Gelb, M. H., and Robinson, B. H. (2005) A ruler for determining the position of proteins in membranes, J. Am. Chem. Soc. 127, 6430-6442.
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 6430-6442
-
-
Nielsen, R.D.1
Che, K.2
Gelb, M.H.3
Robinson, B.H.4
-
34
-
-
84907980197
-
Spin-lattice relaxation of hydrogen atoms and paramagnetic ions in glassy aqueous solutions of sulfuric acid at 77 °K
-
Milov, A. D., Salikhov, K. M., and Tsvetkov, Y. D. (1972) Spin-lattice relaxation of hydrogen atoms and paramagnetic ions in glassy aqueous solutions of sulfuric acid at 77 °K, Fiz. Tverd. Tela 14, 2211-2215.
-
(1972)
Fiz. Tverd. Tela
, vol.14
, pp. 2211-2215
-
-
Milov, A.D.1
Salikhov, K.M.2
Tsvetkov, Y.D.3
-
35
-
-
49349136878
-
The use of spin relaxation phenomena in the investigation of the structure of model and biological systems by the method of spin labels
-
Kulikov, A. V., and Likhtenshtein, G. I. (1977) The use of spin relaxation phenomena in the investigation of the structure of model and biological systems by the method of spin labels, Adv. Mol. Relax. Interact. Proc. 10, 47-69.
-
(1977)
Adv. Mol. Relax. Interact. Proc.
, vol.10
, pp. 47-69
-
-
Kulikov, A.V.1
Likhtenshtein, G.I.2
-
36
-
-
0000852119
-
Time-domain electron paramagnetic resonance as a probe of electron-electron spin-spin interaction in spin-labeled low-spin iron porphyrins
-
Rakowsky, M. H., More, K. M., Kulikov, A. V., Eaton, G. R., and Eaton, S. S. (1995) Time-domain electron paramagnetic resonance as a probe of electron-electron spin-spin interaction in spin-labeled low-spin iron porphyrins, J. Am. Chem. Soc. 117, 2049-2057.
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 2049-2057
-
-
Rakowsky, M.H.1
More, K.M.2
Kulikov, A.V.3
Eaton, G.R.4
Eaton, S.S.5
-
37
-
-
0032014359
-
Determination of high-spin iron(III)-nitroxyl distances in spin-labeled porphyrins by time-domain EPR
-
Rakowsky, M. H., Zecevic, A., Eaton, G. R., and Eaton, S. S. (1998) Determination of high-spin iron(III)-nitroxyl distances in spin-labeled porphyrins by time-domain EPR, J. Magn. Reson. 131, 97-110.
-
(1998)
J. Magn. Reson.
, vol.131
, pp. 97-110
-
-
Rakowsky, M.H.1
Zecevic, A.2
Eaton, G.R.3
Eaton, S.S.4
-
38
-
-
0001349478
-
Interspin distances determined by time domain EPR of spin-labeled high-spin methemoglobin
-
Seiter, M., Budker, V., Du, J.-L., Eaton, G. R., and Eaton, S. S. (1998) Interspin distances determined by time domain EPR of spin-labeled high-spin methemoglobin, Inorg. Chim. Acta 273, 354-366.
-
(1998)
Inorg. Chim. Acta
, vol.273
, pp. 354-366
-
-
Seiter, M.1
Budker, V.2
Du, J.-L.3
Eaton, G.R.4
Eaton, S.S.5
-
39
-
-
0033869649
-
Interspin distances in spin-labeled metmyoglobin variants determined by saturation recovery EPR
-
Zhou, Y., Bowler, B. E., Lynch, K., Eaton, S. S., and Eaton, G. R. (2000) Interspin distances in spin-labeled metmyoglobin variants determined by saturation recovery EPR, Biophys. J. 79, 1039-1052.
-
(2000)
Biophys. J.
, vol.79
, pp. 1039-1052
-
-
Zhou, Y.1
Bowler, B.E.2
Lynch, K.3
Eaton, S.S.4
Eaton, G.R.5
-
40
-
-
0029614376
-
Distance determination in proteins using designed metal ion binding sites and site-directed spin labeling: Application to the lactose permease of Escherichia coli
-
Voss, J., Hubbell, W. L., and Kaback, H. R. (1995) Distance determination in proteins using designed metal ion binding sites and site-directed spin labeling: application to the lactose permease of Escherichia coli, Proc. Natl. Acad. Sci. U.S.A. 92, 12300-12303.
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 12300-12303
-
-
Voss, J.1
Hubbell, W.L.2
Kaback, H.R.3
-
41
-
-
1842326248
-
Conformation of T4 lysozyme in solution. Hinge-bending motion and the substrate-induced conformational transition studied by site-directed spin labeling
-
Mchaourab, H. S., Oh, K. J., Fang, C. J., and Hubbell, W. L. (1997) Conformation of T4 lysozyme in solution. Hinge-bending motion and the substrate-induced conformational transition studied by site-directed spin labeling, Biochemistry 36, 307-316.
-
(1997)
Biochemistry
, vol.36
, pp. 307-316
-
-
Mchaourab, H.S.1
Oh, K.J.2
Fang, C.J.3
Hubbell, W.L.4
-
42
-
-
0036784642
-
A simple model for polyproline II structure in unfolded states of alanine-based peptides
-
Pappu, R. V., and Rose, G. D. (2002) A simple model for polyproline II structure in unfolded states of alanine-based peptides, Protein Sci. 11, 2437-2455.
-
(2002)
Protein Sci.
, vol.11
, pp. 2437-2455
-
-
Pappu, R.V.1
Rose, G.D.2
-
43
-
-
0037021502
-
Tripeptides adopt stable structures in water. A combined polarized visible Raman, FTIR, and VCD spectroscopy study
-
Eker, F., Cao, X., Nafie, L., and Schweitzer-Stenner, R. (2002) Tripeptides adopt stable structures in water. A combined polarized visible Raman, FTIR, and VCD spectroscopy study, J. Am. Chem. Soc. 124, 14330-14341.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 14330-14341
-
-
Eker, F.1
Cao, X.2
Nafie, L.3
Schweitzer-Stenner, R.4
-
44
-
-
0037047134
-
Polyproline II structure in a sequence of seven alanine residues
-
Shi, Z., Olson, C. A., Rose, G. D., Baldwin, R. L., and Kallenbach, N. R. (2002) Polyproline II structure in a sequence of seven alanine residues, Proc. Natl. Acad. Sci. U.S.A. 99, 9190-9195.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 9190-9195
-
-
Shi, Z.1
Olson, C.A.2
Rose, G.D.3
Baldwin, R.L.4
Kallenbach, N.R.5
-
45
-
-
1542276786
-
Raman spectroscopic characterization of secondary structure in natively unfolded proteins: Alpha-synuclein
-
Maiti, N. C., Apetri, M. M., Zagorski, M. G., Carey, P. R., and Anderson, V. E. (2004) Raman spectroscopic characterization of secondary structure in natively unfolded proteins: alpha-synuclein, J. Am. Chem. Soc. 126, 2399-2408.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 2399-2408
-
-
Maiti, N.C.1
Apetri, M.M.2
Zagorski, M.G.3
Carey, P.R.4
Anderson, V.E.5
-
46
-
-
1542347945
-
The conformation of tetraalanine in water determined by polarized Raman, FT-IR, and VCD spectroscopy
-
Schweitzer-Stenner, R., Eker, F., Griebenow, K., Cao, X., and Nafie, L. A. (2004) The conformation of tetraalanine in water determined by polarized Raman, FT-IR, and VCD spectroscopy, J. Am. Chem. Soc. 126, 2768-2776.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 2768-2776
-
-
Schweitzer-Stenner, R.1
Eker, F.2
Griebenow, K.3
Cao, X.4
Nafie, L.A.5
-
47
-
-
3042750640
-
Preferred peptide backbone conformations in the unfolded state revealed by the structure analysis of alanine-based (AXA) tripeptides in aqueous solution
-
Eker, F., Griebenow, K., Cao, X., Nafie, L. A., and Schweitzer-Stenner, R. (2004) Preferred peptide backbone conformations in the unfolded state revealed by the structure analysis of alanine-based (AXA) tripeptides in aqueous solution, Proc. Natl. Acad. Sci. U.S.A. 101, 10054-10059.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 10054-10059
-
-
Eker, F.1
Griebenow, K.2
Cao, X.3
Nafie, L.A.4
Schweitzer-Stenner, R.5
-
48
-
-
3142754280
-
UV Raman demonstrates that alpha-helical polyalanine peptides melt to polyproline II conformations
-
Asher, S. A., Mikhonin, A. V., and Bykov, S. (2004) UV Raman demonstrates that alpha-helical polyalanine peptides melt to polyproline II conformations, J. Am. Chem. Soc. 126, 8433-8440.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 8433-8440
-
-
Asher, S.A.1
Mikhonin, A.V.2
Bykov, S.3
-
49
-
-
0042701995
-
Investigations into sequence and conformational dependence of backbone entropy, inter-basin dynamics and the Flory isolated-pair hypothesis for peptides
-
Zaman, M. H., Shen, M.-Y., Berry, R. S., Freed, K. F., and Sosnick, T. R. (2003) Investigations into sequence and conformational dependence of backbone entropy, inter-basin dynamics and the Flory isolated-pair hypothesis for peptides, J. Mol. Biol. 331, 693-711.
-
(2003)
J. Mol. Biol.
, vol.331
, pp. 693-711
-
-
Zaman, M.H.1
Shen, M.-Y.2
Berry, R.S.3
Freed, K.F.4
Sosnick, T.R.5
-
50
-
-
0038241788
-
Conformational dynamics of trialanine in water. 2. Comparison of AMBER, CHARMM, GROMOS, and OPLS force fields to NMR and infrared experiments
-
Mu, Y., Kosov, D. S., and Stock, G. (2003) Conformational dynamics of trialanine in water. 2. Comparison of AMBER, CHARMM, GROMOS, and OPLS force fields to NMR and infrared experiments, J. Phys. Chem. B 107, 5064-5073.
-
(2003)
J. Phys. Chem. B
, vol.107
, pp. 5064-5073
-
-
Mu, Y.1
Kosov, D.S.2
Stock, G.3
-
51
-
-
0345862082
-
Characterization of non-alpha helical conformations in Ala peptides
-
Garcia, A. E. (2004) Characterization of non-alpha helical conformations in Ala peptides, Polymer 45, 669-676.
-
(2004)
Polymer
, vol.45
, pp. 669-676
-
-
Garcia, A.E.1
-
52
-
-
0035144719
-
Solution structure of native proteins with irregular folds from Raman optical activity
-
Smyth, E., Syme, C. D., Blanch, E. W., Hecht, L., Vasak, M., and Barron, L. D. (2001) Solution structure of native proteins with irregular folds from Raman optical activity, Biopolymers 58, 138-151.
-
(2001)
Biopolymers
, vol.58
, pp. 138-151
-
-
Smyth, E.1
Syme, C.D.2
Blanch, E.W.3
Hecht, L.4
Vasak, M.5
Barron, L.D.6
-
53
-
-
0036129072
-
Polyproline II helical structure in protein unfolded states: Lysine peptides revisited
-
Rucker, A. L., and Creamer, T. P. (2002) Polyproline II helical structure in protein unfolded states: Lysine peptides revisited, Protein Sci. 11, 980-985.
-
(2002)
Protein Sci.
, vol.11
, pp. 980-985
-
-
Rucker, A.L.1
Creamer, T.P.2
-
54
-
-
0014227144
-
New chain conformations of poly(glutamic acid) and polylysine
-
Tiffany, M. L., and Krimm, S. (1968) New chain conformations of poly(glutamic acid) and polylysine, Biopolymers 6, 1379-1382.
-
(1968)
Biopolymers
, vol.6
, pp. 1379-1382
-
-
Tiffany, M.L.1
Krimm, S.2
-
55
-
-
0002251831
-
Circular dichroism and conformation of unordered polypeptides
-
Woody, R. W. (1992) Circular dichroism and conformation of unordered polypeptides, Adv. Biophys. Chem. 2, 37-79.
-
(1992)
Adv. Biophys. Chem.
, vol.2
, pp. 37-79
-
-
Woody, R.W.1
-
56
-
-
23844465902
-
Unusual compactness of a polyproline type II structure
-
Zagrovic, B., Lipfert, J., Sorin, E. J., Millett, I. S., vanGunsteren, W. F., Doniach, S., and Pande, V. S. (2005) Unusual compactness of a polyproline type II structure, Proc. Natl. Acad. Sci. U.S.A. 102, 11698-11703.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 11698-11703
-
-
Zagrovic, B.1
Lipfert, J.2
Sorin, E.J.3
Millett, I.S.4
Vangunsteren, W.F.5
Doniach, S.6
Pande, V.S.7
-
57
-
-
0034649237
-
2+ binding sites in the N-terminal domain of the Prion protein by EPR and CD spectroscopy
-
2+ binding sites in the N-terminal domain of the Prion protein by EPR and CD spectroscopy, Biochemistry 39, 13760-13771.
-
(2000)
Biochemistry
, vol.39
, pp. 13760-13771
-
-
Aronoff-Spencer, E.1
Burns, C.S.2
Avdievich, N.I.3
Gerfen, G.J.4
Peisach, J.5
Antholine, W.E.6
Ball, H.L.7
Cohen, F.E.8
Prusiner, S.B.9
Millhauser, G.L.10
-
58
-
-
18344369706
-
Molecular features of the copper binding sites in the octarepeat domain of the Prion protein
-
Burns, C. S., Aronoff-Spencer, E., Dunham, C. M., Lario, P., Avdievich, N. I., Antholine, W. E., Olmstead, M. M., Vrielink, A., Gerfen, G. J., Peisach, J., Scott, W. G., and Millhauser, G. L. (2002) Molecular features of the copper binding sites in the octarepeat domain of the Prion protein, Biochemistry 41, 3991-4001.
-
(2002)
Biochemistry
, vol.41
, pp. 3991-4001
-
-
Burns, C.S.1
Aronoff-Spencer, E.2
Dunham, C.M.3
Lario, P.4
Avdievich, N.I.5
Antholine, W.E.6
Olmstead, M.M.7
Vrielink, A.8
Gerfen, G.J.9
Peisach, J.10
Scott, W.G.11
Millhauser, G.L.12
-
59
-
-
1242316297
-
Copper binding in the prion protein
-
Millhauser, G. L. (2004) Copper binding in the prion protein, Acc. Chem. Res. 37, 79-85.
-
(2004)
Acc. Chem. Res.
, vol.37
, pp. 79-85
-
-
Millhauser, G.L.1
-
60
-
-
11344291497
-
The ultraviolet circular dichroism of polypeptides
-
Holzwarth, G., and Doty, P. (1965) The ultraviolet circular dichroism of polypeptides, J. Am. Chem. Soc. 87, 218-228.
-
(1965)
J. Am. Chem. Soc.
, vol.87
, pp. 218-228
-
-
Holzwarth, G.1
Doty, P.2
-
61
-
-
0016842180
-
Vacuum ultraviolet circular dichroism of poly(L-proline) I and II
-
Young, M. A., and Pysh, E. S. (1975) Vacuum ultraviolet circular dichroism of poly(L-proline) I and II, J. Am. Chem. Soc. 97, 5100-5103.
-
(1975)
J. Am. Chem. Soc.
, vol.97
, pp. 5100-5103
-
-
Young, M.A.1
Pysh, E.S.2
-
62
-
-
0035807931
-
Host-guest study of left-handed polyproline II helix formation
-
Kelly, M. A., Chellgren, B. W., Rucker, A. L., Troutman, J. M., Fried, M. G., Miller, A.-F., and Creamer, T. P. (2001) Host-guest study of left-handed polyproline II helix formation, Biochemistry 40, 14376-14383.
-
(2001)
Biochemistry
, vol.40
, pp. 14376-14383
-
-
Kelly, M.A.1
Chellgren, B.W.2
Rucker, A.L.3
Troutman, J.M.4
Fried, M.G.5
Miller, A.-F.6
Creamer, T.P.7
-
63
-
-
84986528070
-
The MM3 force field for amides, polypeptides and proteins
-
Lii, J. H., and Allinger, N. L. (1991) The MM3 force field for amides, polypeptides and proteins, J. Comput. Chem. 12, 186-199.
-
(1991)
J. Comput. Chem.
, vol.12
, pp. 186-199
-
-
Lii, J.H.1
Allinger, N.L.2
-
65
-
-
0032558110
-
Assessment of a combined QM/MM approach for the study of large nitroxide systems in vacuo and in condensed phases
-
Barone, V., Bencini, A., Cossi, M., Matteo, A. D., Mattesini, M., and Totti, F. (1998) Assessment of a combined QM/MM approach for the study of large nitroxide systems in vacuo and in condensed phases, J. Am. Chem. Soc. 120, 7069-7078.
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 7069-7078
-
-
Barone, V.1
Bencini, A.2
Cossi, M.3
Matteo, A.D.4
Mattesini, M.5
Totti, F.6
-
66
-
-
0029878720
-
VMD: Visual molecular dynamics
-
Humphrey, W., Dalke, A., and Schulten, K. (1996) VMD: visual molecular dynamics, J. Mol. Graphics 14, 33-38.
-
(1996)
J. Mol. Graphics
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
67
-
-
0042415783
-
NAMD2: Greater scalability for parallel molecular dynamics
-
Kale, L., Skeel, R., Bhandarkar, M., Brunner, R., Gursoy, A., Krawetz, N., Phillips, J., Shinozaki, A., Varadarajan, K., and Schulten, K. (1999) NAMD2: Greater scalability for parallel molecular dynamics, J. Comput. Phys. 151, 283-312.
-
(1999)
J. Comput. Phys.
, vol.151
, pp. 283-312
-
-
Kale, L.1
Skeel, R.2
Bhandarkar, M.3
Brunner, R.4
Gursoy, A.5
Krawetz, N.6
Phillips, J.7
Shinozaki, A.8
Varadarajan, K.9
Schulten, K.10
-
68
-
-
0001538909
-
Canonical dynamics: Equilibrium phase-space distributions
-
Hoover, W. G. (1985) Canonical dynamics: Equilibrium phase-space distributions, Phys. Rev. A 31, 1695-1697.
-
(1985)
Phys. Rev. A
, vol.31
, pp. 1695-1697
-
-
Hoover, W.G.1
-
69
-
-
0026489966
-
Selective placement of electron spin labels: New structural methods for peptides and proteins
-
Millhauser, G. L. (1992) Selective placement of electron spin labels: new structural methods for peptides and proteins, Trends Biochem. Sci. 17, 448-452.
-
(1992)
Trends Biochem. Sci.
, vol.17
, pp. 448-452
-
-
Millhauser, G.L.1
-
70
-
-
0034003935
-
Protein global fold determination using site-directed spin and isotope labeling
-
Gaponenko, V., Howarth, J. W., Columbus, L., Gasmi-Seabrook, G., Yuan, J., Hubbell, W. L., and Rosevear, P. R. (2000) Protein global fold determination using site-directed spin and isotope labeling, Protein Sci. 9, 302-309.
-
(2000)
Protein Sci.
, vol.9
, pp. 302-309
-
-
Gaponenko, V.1
Howarth, J.W.2
Columbus, L.3
Gasmi-Seabrook, G.4
Yuan, J.5
Hubbell, W.L.6
Rosevear, P.R.7
-
71
-
-
0016186736
-
Use of saturation curves for evaluating distances in biological objects by the method of double spin labels
-
Kulikov, A. V., and Likhtenshtein, G. I. (1974) Use of saturation curves for evaluating distances in biological objects by the method of double spin labels, Biofizika 19, 420-424.
-
(1974)
Biofizika
, vol.19
, pp. 420-424
-
-
Kulikov, A.V.1
Likhtenshtein, G.I.2
-
72
-
-
0016904158
-
Determination of the distance between the spins of the spin-label and paramagnetic center in spin-labeled proteins from the saturation curve parameters of EPR spectra of the labels at 77 K
-
Kulikov, A. V. (1976) Determination of the distance between the spins of the spin-label and paramagnetic center in spin-labeled proteins from the saturation curve parameters of EPR spectra of the labels at 77 K, Mol. Biol. (Moscow) 10, 132-141.
-
(1976)
Mol. Biol. (Moscow)
, vol.10
, pp. 132-141
-
-
Kulikov, A.V.1
-
73
-
-
0008080420
-
Two-dimensional electron spin-echoes: Magnetization transfer and molecular dynamics
-
Schwartz, L. J., Millhauser, G. L., and Freed, J. H. (1986) Two-dimensional electron spin-echoes: Magnetization transfer and molecular dynamics, Chem. Phys. Lett. 127, 60-66.
-
(1986)
Chem. Phys. Lett.
, vol.127
, pp. 60-66
-
-
Schwartz, L.J.1
Millhauser, G.L.2
Freed, J.H.3
-
74
-
-
33749030335
-
-
Ph.D. Thesis in Chemistry, Cornell University, Ithaca, NY
-
Schwartz, L. J. (1984) Ph.D. Thesis in Chemistry, Cornell University, Ithaca, NY.
-
(1984)
-
-
Schwartz, L.J.1
-
75
-
-
33745930076
-
Relaxation effects in nuclear magnetic resonance absorption
-
Bloembergen, N., Purcell, E. M., and Pound, R. V. (1948) Relaxation effects in nuclear magnetic resonance absorption, Phys. Rev. 73, 679-712.
-
(1948)
Phys. Rev.
, vol.73
, pp. 679-712
-
-
Bloembergen, N.1
Purcell, E.M.2
Pound, R.V.3
-
76
-
-
0001739017
-
On the interaction of nuclear spins in a crystalline lattice
-
Bloembergen, N. (1949) On the interaction of nuclear spins in a crystalline lattice, Physica 15, 386-426.
-
(1949)
Physica
, vol.15
, pp. 386-426
-
-
Bloembergen, N.1
-
77
-
-
0000788028
-
Cross-relaxation in spin system
-
Bloembergen, N., Shapiro, S., Pershan, P. S., and Artman, J. O. (1959) Cross-relaxation in spin system, Phys. Rev. 114, 445-459.
-
(1959)
Phys. Rev.
, vol.114
, pp. 445-459
-
-
Bloembergen, N.1
Shapiro, S.2
Pershan, P.S.3
Artman, J.O.4
-
78
-
-
28844488267
-
Double quantum coherence electron spin resonance on coupled Cu(II)-Cu(II) spins
-
Becker, J. S., and Saxena, S. (2005) Double quantum coherence electron spin resonance on coupled Cu(II)-Cu(II) spins, Chem. Phys. Lett. 414, 248-252.
-
(2005)
Chem. Phys. Lett.
, vol.414
, pp. 248-252
-
-
Becker, J.S.1
Saxena, S.2
-
79
-
-
0000210354
-
Theory of two-dimensional Fourier-transform electron spin resonance for ordered and viscous fluids
-
Lee, S., Budil, D. E., and Freed, J. H. (1994) Theory of two-dimensional Fourier-transform electron spin resonance for ordered and viscous fluids, J. Chem. Phys. 101, 5529-5558.
-
(1994)
J. Chem. Phys.
, vol.101
, pp. 5529-5558
-
-
Lee, S.1
Budil, D.E.2
Freed, J.H.3
-
80
-
-
3042681600
-
Nature of structural inhomogeneities on folding a helix and their influence on spectral measurements
-
Gnanakaran, S., Hochstrasser, R. M., and Garcia, A. E. (2004) Nature of structural inhomogeneities on folding a helix and their influence on spectral measurements, Proc. Natl. Acad. Sci. U.S.A. 101, 9229-9234.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 9229-9234
-
-
Gnanakaran, S.1
Hochstrasser, R.M.2
Garcia, A.E.3
-
81
-
-
0029559771
-
A method for distance determination in proteins using a designed metal ion binding site and site-directed spin labeling: Evaluation with T4 lysozyme
-
Voss, J., Salwinski, L., Kaback, H. R., and Hubbell, W. L. (1995) A method for distance determination in proteins using a designed metal ion binding site and site-directed spin labeling: Evaluation with T4 lysozyme, Proc. Natl. Acad. Sci. U.S.A. 92, 12295-12299.
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 12295-12299
-
-
Voss, J.1
Salwinski, L.2
Kaback, H.R.3
Hubbell, W.L.4
-
82
-
-
0001773735
-
Relaxation times of organic radicals and transition metal ions
-
(Berliner, L. J., Eaton, S. S., and Eaton, G. R., Eds.), Kluwer Academic/Plenum Publisher, New York
-
Eaton, S. S., and Eaton, G. R. (2000) Relaxation times of organic radicals and transition metal ions, in Distance Measurements in Biological Systems by EPR (Berliner, L. J., Eaton, S. S., and Eaton, G. R., Eds.) pp 29-154, Kluwer Academic/Plenum Publisher, New York.
-
(2000)
Distance Measurements in Biological Systems by EPR
, pp. 29-154
-
-
Eaton, S.S.1
Eaton, G.R.2
-
83
-
-
14544283620
-
Polyproline and the "spectroscopic ruler" revisited with single-molecule fluorescence
-
Schuler, B., Lipman, E. A., Steinbach, P. J., Kumke, M., and Eaton, W. A. (2005) Polyproline and the "spectroscopic ruler" revisited with single-molecule fluorescence, Proc. Natl. Acad. Sci. U.S.A. 102, 2754-2759.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 2754-2759
-
-
Schuler, B.1
Lipman, E.A.2
Steinbach, P.J.3
Kumke, M.4
Eaton, W.A.5
-
84
-
-
0035852964
-
Helix packing in the lactose permease of Escherichia coli: Distances between site-directed nitroxides and a lanthanide
-
Voss, J., Wu, J., Hubbell, W. L., Jacques, V., Meares, C. F., and Kaback, H. R. (2001) Helix packing in the lactose permease of Escherichia coli: Distances between site-directed nitroxides and a lanthanide, Biochemistry 40, 3184-3188.
-
(2001)
Biochemistry
, vol.40
, pp. 3184-3188
-
-
Voss, J.1
Wu, J.2
Hubbell, W.L.3
Jacques, V.4
Meares, C.F.5
Kaback, H.R.6
-
85
-
-
0032488624
-
Helix packing in the lactose permease determined by metal-nitroxide interaction
-
Voss, J., Hubbell, W. L., and Kaback, H. R. (1998) Helix packing in the lactose permease determined by metal-nitroxide interaction, Biochemistry 37, 211-216.
-
(1998)
Biochemistry
, vol.37
, pp. 211-216
-
-
Voss, J.1
Hubbell, W.L.2
Kaback, H.R.3
|