Helicases as molecular motors: An insight

Physica A: Statistical Mechanics and its Applications

Volumn 372, Issue 1 SPEC. ISS., 2006, Pages 70-83

  Tuteja, Narendra ^a   Tuteja, Renu ^a  

^a INTERNATIONAL CENTRE FOR GENETIC ENGINEERING AND BIOTECHNOLOGY ICGEB   (India)

Author keywords

ATPase; Helicase classification; Helicase related diseases; Molecular motors; Signature motifs; Unwinding enzyme

Indexed keywords

BACTERIA; DNA; ESCHERICHIA COLI; HYDROLYSIS; MICROBIOLOGY; MOLECULAR DYNAMICS; MOTOR TRANSPORTATION; NUCLEIC ACIDS;

ATPASE; HELICASE CLASSIFICATION; HELICASE RELATED DISEASES; MOLECULAR MOTORS; SIGNATURE MOTIFS; UNWINDING ENZYMES;

STATISTICAL MECHANICS;

EID: 33748922056     PISSN: 03784371     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.physa.2006.05.014     Document Type: Article

References (65)

1. Soultanas P., and Wigley D.B. Trends Biochem. Sci. 26 (2001) 47
2. Tuteja N., and Tuteja R. Eur. J. Biochem. 271 (2004) 1835
3. Tuteja N. J. Exp. Bot. 54 (2003) 2201
4. Tuteja N., and Tuteja R. Nat. Genet. 13 (1996) 11
5. Matson S.W. Prog. Nucleic Acids Res. Mol. Biol. 40 (1991) 289
6. Lohman T.M. Mol. Microbiol. 6 (1992) 5
7. West S.C. Cell 86 (1996) 177
8. Patel S.S., and Picha K.M. Annu. Rev. Biochem. 69 (2000) 651
9. Caruthers J.M., and McKay D.B. Curr. Opin. Struct. Biol. 12 (2002) 123
10. Gorbalenya A.E., Koonin E.V., Donchenko A.P., and Blinov V.M. FEBS Lett. 235 (1988) 16
11. Linder P., Lasko P.F., Ashburner M., Leroy P., Nielsen P.J., Nishi K., Schneir J., and Slonimski P.P. Nature 337 (1989) 121
12. Schaeffer L., Roy R., Humbert S., Moncollin V., Vermeulen W., Hoeijmakers J.H.J., Chambon P., and Egly J.-M. Science 260 (1993) 58
13. Sanan-Mishra N., Pham X.H., Sopory S.K., and Tuteja N. Proc. Natl. Acad. Sci. USA 102 (2005) 509
14. Watson J.D., and Crick F.H.C. Nature 191 (1953) 737
15. Abdel-Monem M., Durwald H., and Hoffmann-Berling H. Eur. J. Biochem. 65 (1976) 441
16. Hotta Y., and Stern H. Biochemistry 17 (1978) 1872
17. Venkatesan M., Silver I.L., and Nossal N.G. J. Biol. Chem. 257 (1982) 12426
18. Matson S.W., Tabor S., and Richardson C.C. J. Biol. Chem. 258 (1983) 14017
19. Stahl H., Droge P., and Knippers R. EMBO J. 5 (1986) 1939
20. Hodgeman T.C. Nature 333 (1988) 22
21. Gorbalenya A.E., Koonin E.V., Donchenko A.P., and Blinov V.M. Nucleic Acids Res. 17 (1989) 4713
22. Tuteja N., Tuteja R., Rahman K., Kang L.-Y., and Falaschi A. Nucleic Acids Res. 18 (1990) 6785
23. Umezu K., Nakayama K., and Nakayama H. Proc. Natl. Acad. Sci. USA 87 (1990) 5363
24. Hehman G.L., and Hauswirth W.W. Proc. Natl. Acad. Sci. USA 89 (1992) 8562
25. Tuteja N., Tuteja R., Ochem A., Taneja P., Huang N.W., Simoncsits A., Susic S., Rahman K., Marusic L., Chen J., Zhang J., Wang S., Pongor S., and Falaschi A. EMBO J. 13 (1994) 4991
26. Tuteja N., Phan T.N., and Tewari K.K. Eur. J. Biochem. 238 (1996) 54
27. Subramanya H.S., Bird L.E., Brannigan J.A., and Wigley D.B. Nature 384 (1996) 379
28. Ishimi Y. J. Biol. Chem. 272 (1997) 24508
29. Gray M.D., Shen J.C., Kamath-Loeb A.S., Blank A., Sopher B.L., Martin G.M., Oshma J., and Loeb L.A. Nature Genet. 17 (1997) 100
30. Karow J.K., Chakraverty R.K., and Hickson R.D. J. Biol. Chem. 272 (1997) 30611
31. Pham X.H., Reddy M.K., Ehtesham N.Z., Matta B., and Tuteja N. Plant J. 24 (2000) 219
32. Tuteja R., Malhotra P., Song P., Tuteja N., and Chauhan V.S. Mol. Biol. Parasitol. 124 (2002) 79
33. Tanner N.K., Cordin O., Banroques J., Doère M., and Linder P. Mol. Cell 11 (2003) 127
34. Pradhan A., Chauhan V.S., and Tuteja R. Mol. Biochem. Parasitol. 140 (2005) 55
35. Hall M.C., and Matson S.W. Mol. Microbiol. 34 (1999) 867
36. Dillingham M.S., Spies M., and Kowalczykowski S.C. Nature 423 (2003) 893
37. Naqvi A., Tinsley E., and Khan S.A. J. Bacteriol. 185 (2003) 6633
38. Constantinesco F., Forterre P., Koonin E.V., Aravind L., and Elie C.A. Nucleic Acids Res. 32 (2004) 1439
39. Vashisht A., Pradhan A., Tuteja R., and Tuteja N. Plant J. 44 (2005) 76
40. Gorbalenya A.E., and Koonin E.V. Curr. Opin. Struct. Biol. 3 (1993) 419
41. Costa M., Ochem A., Staub A., and Falaschi A. Nucleic Acids Res. 27 (1999) 817
42. SenGupta D.J., and Borowiec J.A. Science 256 (1992) 1656
43. Zhang S., and Grosse F. Biochemistry 33 (1994) 3906
44. Matson S.W., Bean D.W., and George J.W. Bioessays 16 (1994) 13
45. Tuteja N. Crit. Rev. Plant Sci. 19 (2000) 449
46. Ayora S., Weise F., Mesa P., Stasiak A., and Alonso J.C. Nucleic Acids Res. 30 (2002) 2280
47. Tuteja N., and Tuteja R. Eur. J. Biochem. 271 (2004) 1849
48. Laurent B.C., Treitel M.A., and Carlson M. Proc. Natl. Acad. Sci. USA 88 (1991) 2687
49. Tanner N.K., and Linder P. Mol. Cell. 8 (2001) 251
50. Walker J.E., Saraste M., Runswick M.J., and Gay N.J. EMBO J. 1 (1982) 945
51. Gorbalenya A.E., and Koonin E.V. Nucleic Acids Res. 17 (1989) 8413
52. Velankar S.S., Soultanas P., Dillingham M.S., Subramanya H.S., and Wigley D.B. Cell 97 (1999) 75
53. Pause A., and Sonenberg N. EMBO J. 11 (1992) 2643
54. Tuteja N., Beven A.F., Shaw P.J., and Tuteja R. Plant J. 25 (2001) 9
55. Tuteja N., and Tuteja R. Crit. Rev. Biochem. Mol. Biol. 36 (2001) 261
56. Tuteja N., Singh M.B., Misra M.K., Bhalla P.L., and Tuteja R. Crit. Rev. Biochem. Mol. Biol. 36 (2001) 337
57. Lindahl T., and Wood R.D. Science 286 (1999) 1897
58. Lohman T.M., and Bjornson K.P. Annu. Rev. Biochem. 65 (1996) 169
59. Yarranton G.T., and Gefter M.L. Proc. Natl. Acad. Sci. USA 76 (1979) 1658
60. Velankar S.S., Soultanas P., Dillingham M.S., Subramanya H.S., and Wigley D.B. Cell 97 (1999) 75
61. Delagoutte E., and von Hippel P.H. Q. Rev. Biophys. 35 (2002) 431
62. Hsieh J., Moore K.J., and Lohman T.M. J. Mol. Biol. 288 (1999) 255
63. Mechanic L.E., Hall M.C., and Matson S.W. J. Biol. Chem. 274 (1999) 12288
64. Bianco P.R., and Kowalczykowski S.C. Nature 405 (2000) 368
65. Delagoutte E., and von Hippel P.H. Q. Rev. Biophys. 36 (2003) 1