-
1
-
-
0005008115
-
-
chapter Evaluating the statistical significance of multiple distinct local alignments, New York: Plenum Press
-
Altschul, S. (1997). Theorical and compuational methods in genome research, chapter Evaluating the statistical significance of multiple distinct local alignments, pages 1-14. New York: Plenum Press.
-
(1997)
Theorical and Compuational Methods in Genome Research
, pp. 1-14
-
-
Altschul, S.1
-
2
-
-
0022885515
-
Locally optimal subalignments similarity and its significance levels
-
Altschul, S. and Erickson, B. (1986a). Locally optimal subalignments similarity and its significance levels. Bulletin of Mathematical Biology 48, 633-660.
-
(1986)
Bulletin of Mathematical Biology
, vol.48
, pp. 633-660
-
-
Altschul, S.1
Erickson, B.2
-
3
-
-
0022897983
-
A nonlinear measure of subalignments similarity and its significance levels
-
Altschul, S. and Erickson, B. (1986b). A nonlinear measure of subalignments similarity and its significance levels. Bulletin of Mathematical Biology 48, 617-632.
-
(1986)
Bulletin of Mathematical Biology
, vol.48
, pp. 617-632
-
-
Altschul, S.1
Erickson, B.2
-
4
-
-
0025183708
-
Basic local alignement search tool
-
Altschul, S., Gish, W., Miller, W., Myers, E. and Lipman, D. (1990). Basic local alignement search tool. Journal of Molecular Biology 215, 403-410.
-
(1990)
Journal of Molecular Biology
, vol.215
, pp. 403-410
-
-
Altschul, S.1
Gish, W.2
Miller, W.3
Myers, E.4
Lipman, D.5
-
5
-
-
18444417980
-
Mdr and prp: A comparison of methods for high-order genotype-phenotype associations
-
Bastone, L., Reilly, M., Rader, D. and Foulkes, A. (2004). Mdr and prp: a comparison of methods for high-order genotype-phenotype associations. Human Heredity 58, 82-92.
-
(2004)
Human Heredity
, vol.58
, pp. 82-92
-
-
Bastone, L.1
Reilly, M.2
Rader, D.3
Foulkes, A.4
-
6
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y. and Hochberg, Y. (1995). Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society B 57, 289-300.
-
(1995)
Journal of the Royal Statistical Society B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
7
-
-
0026520770
-
Methods and algorithms for statistical analysis of protein sequences
-
Brendel, V., Bucher, P., Nourbakhsh, I., Blaisdell, B. and Karlin, S. (1992). Methods and algorithms for statistical analysis of protein sequences. Proceedings of the National Academy of Science USA 89, 2002-2006.
-
(1992)
Proceedings of the National Academy of Science USA
, vol.89
, pp. 2002-2006
-
-
Brendel, V.1
Bucher, P.2
Nourbakhsh, I.3
Blaisdell, B.4
Karlin, S.5
-
8
-
-
12744259874
-
Identifying snps predictive of phenotype using random forests
-
Bureau, A., Dupuis, J., Falls, K., Lunetta, K., Hayward, B., Keith, T. and Van Eerdewegh, P. (2005). Identifying snps predictive of phenotype using random forests. Genetic Epidemiology 28, 171-182.
-
(2005)
Genetic Epidemiology
, vol.28
, pp. 171-182
-
-
Bureau, A.1
Dupuis, J.2
Falls, K.3
Lunetta, K.4
Hayward, B.5
Keith, T.6
Van Eerdewegh, P.7
-
9
-
-
2642583283
-
Mapping complex disease loci in whole-genome association studies
-
Carlson, C., Eberle, M., Kruglyak, L. and Nickerson, D. (2004). Mapping complex disease loci in whole-genome association studies. Nature 429, 446-452.
-
(2004)
Nature
, vol.429
, pp. 446-452
-
-
Carlson, C.1
Eberle, M.2
Kruglyak, L.3
Nickerson, D.4
-
10
-
-
0344033602
-
Detecting disease associations due to linkage disequilibrium using haplotype tags: A class of tests and the determinants of statistical power
-
Chapman, J. M., Cooper, J. D., Todd, J. A. and Clayton, D. G. (2003). Detecting disease associations due to linkage disequilibrium using haplotype tags: a class of tests and the determinants of statistical power. Human Heredity 56, 18-31.
-
(2003)
Human Heredity
, vol.56
, pp. 18-31
-
-
Chapman, J.M.1
Cooper, J.D.2
Todd, J.A.3
Clayton, D.G.4
-
11
-
-
0037108758
-
Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia
-
Chumakov, I., Macciardi, F., Sham, P., Straub, R., Weinberger, D., Cohen, N. and Cohen, D. (2002). Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia. Proceedings of the National Academy of Science USA 99, 13675-13680.
-
(2002)
Proceedings of the National Academy of Science USA
, vol.99
, pp. 13675-13680
-
-
Chumakov, I.1
Macciardi, F.2
Sham, P.3
Straub, R.4
Weinberger, D.5
Cohen, N.6
Cohen, D.7
-
12
-
-
10044279127
-
Use of unphased multilocus genotype data in indirect association studies
-
Clayton, D., Champan, J. and Cooper, J. (2004). Use of unphased multilocus genotype data in indirect association studies. Genetic Epidemiology 27, 415-428.
-
(2004)
Genetic Epidemiology
, vol.27
, pp. 415-428
-
-
Clayton, D.1
Champan, J.2
Cooper, J.3
-
13
-
-
0032429154
-
A dna polymorphism discovery resource for research on human genetic variation
-
Collins, F., Brooks, L. and Chakravarti, A. (1998). A dna polymorphism discovery resource for research on human genetic variation. Genome Research 8, 1229-1231.
-
(1998)
Genome Research
, vol.8
, pp. 1229-1231
-
-
Collins, F.1
Brooks, L.2
Chakravarti, A.3
-
14
-
-
0000387249
-
Strong limit theorems of empirical functionals for large exceedances of partial sums of iid variables
-
Dembo, A. and Karlin, S. (1991). Strong limit theorems of empirical functionals for large exceedances of partial sums of iid variables. Annals of Probability 19, 1737-1755.
-
(1991)
Annals of Probability
, vol.19
, pp. 1737-1755
-
-
Dembo, A.1
Karlin, S.2
-
15
-
-
33745689721
-
G72/g30 in schizophrenia and bipolar disorder: Review and meta-analysis
-
in press
-
Detera-Wadleigh, S. D. and McMahon, F. J. (2006). G72/g30 in schizophrenia and bipolar disorder: review and meta-analysis. Biological Psychiatry [in press] .
-
(2006)
Biological Psychiatry
-
-
Detera-Wadleigh, S.D.1
McMahon, F.J.2
-
16
-
-
0034917944
-
A transmission/disequilibrium test that allows for genotyping errors in the analysis of single nucleotide polymorphism data
-
Gordon, D., Heath, S., Liu, X. and Ott, J. (2001). A transmission/ disequilibrium test that allows for genotyping errors in the analysis of single nucleotide polymorphism data. American Journal Human Genetics 69, 371-380.
-
(2001)
American Journal Human Genetics
, vol.69
, pp. 371-380
-
-
Gordon, D.1
Heath, S.2
Liu, X.3
Ott, J.4
-
17
-
-
0346101571
-
Power estimation of multiple snp association test of case-control study and application
-
Hao, K., Xu, X., Laird, N., Wang, X. and Xu, X. (2004). Power estimation of multiple snp association test of case-control study and application. Genetic Epidemiology 26, 22-30.
-
(2004)
Genetic Epidemiology
, vol.26
, pp. 22-30
-
-
Hao, K.1
Xu, X.2
Laird, N.3
Wang, X.4
Xu, X.5
-
18
-
-
13144306071
-
Genome-wide association studies for common diseases and complex traits
-
Hirschhorn, J. N. and Daly, M. J. (2005). Genome-wide association studies for common diseases and complex traits. Nature Reviews Genetics 6, 95-108.
-
(2005)
Nature Reviews Genetics
, vol.6
, pp. 95-108
-
-
Hirschhorn, J.N.1
Daly, M.J.2
-
20
-
-
0042881041
-
Mathematical multi-locus approaches to localizing complex human trait genes
-
Hoh, J. and Ott, J. (2003). Mathematical multi-locus approaches to localizing complex human trait genes. Nature Reviews Genetics 4, 701-709.
-
(2003)
Nature Reviews Genetics
, vol.4
, pp. 701-709
-
-
Hoh, J.1
Ott, J.2
-
21
-
-
0035214299
-
Trimming, weighting, and grouping snps in human case-control association studies
-
Hoh, J., Wille, A. and Ott, J. (2001). Trimming, weighting, and grouping snps in human case-control association studies. Genome Research 11, 2115-2119.
-
(2001)
Genome Research
, vol.11
, pp. 2115-2119
-
-
Hoh, J.1
Wille, A.2
Ott, J.3
-
22
-
-
0001506434
-
Extremes values in the gi/g/1 queues
-
Iglehart, D. (1972). Extremes values in the gi/g/1 queues. Annals of Mathematical Statistics 43, 627-635.
-
(1972)
Annals of Mathematical Statistics
, vol.43
, pp. 627-635
-
-
Iglehart, D.1
-
24
-
-
0025259313
-
Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
-
Karlin, S. and Altschul, S. (1990). Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. Proceedings of the National Academy of Science USA 87, 2264-2268.
-
(1990)
Proceedings of the National Academy of Science USA
, vol.87
, pp. 2264-2268
-
-
Karlin, S.1
Altschul, S.2
-
25
-
-
0027175241
-
Applications and statistics for multiple high-scoring segments in molecular sequences
-
Karlin, S. and Altschul, S. (1993). Applications and statistics for multiple high-scoring segments in molecular sequences. Proceedings of the National Academy of Science USA 90, 5873-5877.
-
(1993)
Proceedings of the National Academy of Science USA
, vol.90
, pp. 5873-5877
-
-
Karlin, S.1
Altschul, S.2
-
26
-
-
0026718403
-
Chance and significance in protein and dna sequence analysis
-
Karlin, S. and Brendel, V. (1992). Chance and significance in protein and dna sequence analysis. Science 257, 39-49.
-
(1992)
Science
, vol.257
, pp. 39-49
-
-
Karlin, S.1
Brendel, V.2
-
27
-
-
0025855017
-
Statistical-methods and insights for protein and dna-sequences
-
Karlin, S., Bucher, P., Brendel, V. and Altschul, S. (1991). Statistical-methods and insights for protein and dna-sequences. Annual Review of Biophysics and Biophysical Chemistry 20, 175-203.
-
(1991)
Annual Review of Biophysics and Biophysical Chemistry
, vol.20
, pp. 175-203
-
-
Karlin, S.1
Bucher, P.2
Brendel, V.3
Altschul, S.4
-
28
-
-
0000586227
-
Limit distributions of maximal segmental score among markov-dependant partial sums
-
Karlin, S. and Dembo, A. (1992). Limit distributions of maximal segmental score among markov-dependant partial sums. Advances in Applied Probability 24, 113-140.
-
(1992)
Advances in Applied Probability
, vol.24
, pp. 113-140
-
-
Karlin, S.1
Dembo, A.2
-
29
-
-
0035004195
-
Complexity and power in case-control association studies
-
Longmate, J. (2001). Complexity and power in case-control association studies. American Journal Human Genetics 68, 1229-1237.
-
(2001)
American Journal Human Genetics
, vol.68
, pp. 1229-1237
-
-
Longmate, J.1
-
30
-
-
27544442108
-
Association cluster detector: A tool for heuristic detection of significance cluters in whole-genome scans
-
Marques-Bonet, T., Lao, O., Goertsches, Robert ad Comabella, M., Montalban, X. and Navarro, A. (2005). Association cluster detector: a tool for heuristic detection of significance cluters in whole-genome scans. Bioinformatics 21, ii180-ii181.
-
(2005)
Bioinformatics
, vol.21
-
-
Marques-Bonet, T.1
Lao, O.2
Goertsches3
Robert Ad Comabella, M.4
Montalban, X.5
Navarro, A.6
-
31
-
-
0036094264
-
Power and efficiency of the tdt and case-control design for association scans
-
McGinnis, R., Shifman, S. and Darvasi, A. (2002). Power and efficiency of the tdt and case-control design for association scans. Behavior Genetics 32, 135-144.
-
(2002)
Behavior Genetics
, vol.32
, pp. 135-144
-
-
McGinnis, R.1
Shifman, S.2
Darvasi, A.3
-
32
-
-
0034796947
-
Exact distribution for the local score of one i.i.d random sequence
-
Mercier, S. and Daudin, J. (2001). Exact distribution for the local score of one i.i.d random sequence. Journal of Computational Biology 8, 373-380.
-
(2001)
Journal of Computational Biology
, vol.8
, pp. 373-380
-
-
Mercier, S.1
Daudin, J.2
-
33
-
-
0345255227
-
Multipoint linkage-disequilibrium mapping narrows location interval and identifies mutation heterogeneity
-
Morris, A., Whittaker, J. and Balding, D. (2003). Multipoint linkage-disequilibrium mapping narrows location interval and identifies mutation heterogeneity. Proceedings of the National Academy of Science USA 11, 13442-13446.
-
(2003)
Proceedings of the National Academy of Science USA
, vol.11
, pp. 13442-13446
-
-
Morris, A.1
Whittaker, J.2
Balding, D.3
-
34
-
-
0035084663
-
A combinatorial partitioning method to identify multilocus genotypic partitions that predict quantitative trait variation
-
Nelson, M., Kardia, S., Ferrell, R. and Sing, C. (2001). A combinatorial partitioning method to identify multilocus genotypic partitions that predict quantitative trait variation. Genome Research 11, 458-470.
-
(2001)
Genome Research
, vol.11
, pp. 458-470
-
-
Nelson, M.1
Kardia, S.2
Ferrell, R.3
Sing, C.4
-
35
-
-
8544252495
-
Effect of two- and three-locus linkage disequilibrium on the power to detect marker/phenotype associations
-
Nielsen, D. M., Ehm, M. G., Zaykin, D. V. and Weir, B. S. (2004). Effect of two- and three-locus linkage disequilibrium on the power to detect marker/phenotype associations. Genetics 168, 1029-1040.
-
(2004)
Genetics
, vol.168
, pp. 1029-1040
-
-
Nielsen, D.M.1
Ehm, M.G.2
Zaykin, D.V.3
Weir, B.S.4
-
36
-
-
1542330229
-
Assessing optimal neural network architecture for identifying disease-associated multi-marker genotypes using a permutation test, and application to calpain 10 polymorphisms associated with diabetes
-
North, B., Curtis, D., Cassell, P., Hitman, G. and Sham, P. (2003). Assessing optimal neural network architecture for identifying disease-associated multi-marker genotypes using a permutation test, and application to calpain 10 polymorphisms associated with diabetes. Annals Human Genetics 67, 348-356.
-
(2003)
Annals Human Genetics
, vol.67
, pp. 348-356
-
-
North, B.1
Curtis, D.2
Cassell, P.3
Hitman, G.4
Sham, P.5
-
37
-
-
19944365879
-
Issues in association analysis: Error control in case-control association studies for disease gene discovery
-
Ott, J. (2004). Issues in association analysis: error control in case-control association studies for disease gene discovery. Human Heredity 58, 171-174.
-
(2004)
Human Heredity
, vol.58
, pp. 171-174
-
-
Ott, J.1
-
38
-
-
0142059667
-
"are we there yet?": Deciding when one has demonstrated specific genetic causation in complex diseases and quantitative traits
-
Page, G., George, V., Go, R., Page, P. and Allison, D. (2003). "are we there yet?": deciding when one has demonstrated specific genetic causation in complex diseases and quantitative traits. American Journal Human Genetics 73, 711-719.
-
(2003)
American Journal Human Genetics
, vol.73
, pp. 711-719
-
-
Page, G.1
George, V.2
Go, R.3
Page, P.4
Allison, D.5
-
40
-
-
0034041234
-
Searching for genes in complex diseases: Lessons from systemic lupus erythematosus
-
Risch, N. (2000). Searching for genes in complex diseases: lessons from systemic lupus erythematosus. American Society for Clinical Investigation 105, 1503-1506.
-
(2000)
American Society for Clinical Investigation
, vol.105
, pp. 1503-1506
-
-
Risch, N.1
-
41
-
-
0029741063
-
The future of genetic studies of complex human diseases
-
Risch, N. and Merikangas, K. (1996). The future of genetic studies of complex human diseases. Science 273, 1516-1517.
-
(1996)
Science
, vol.273
, pp. 1516-1517
-
-
Risch, N.1
Merikangas, K.2
-
43
-
-
10044294770
-
Evaluating association of haplotypes with traits
-
Schaid, D. (2004). Evaluating association of haplotypes with traits. Genetic Epidemiology 27, 348-364.
-
(2004)
Genetic Epidemiology
, vol.27
, pp. 348-364
-
-
Schaid, D.1
-
44
-
-
1942499454
-
Advanced sequencing technologies: Methods and goals
-
Shendure, J., Mitra, R., Varma, C. and Church, G. (2004). Advanced sequencing technologies: methods and goals. Nature Review Genetics 5, 335-344.
-
(2004)
Nature Review Genetics
, vol.5
, pp. 335-344
-
-
Shendure, J.1
Mitra, R.2
Varma, C.3
Church, G.4
-
45
-
-
0029858544
-
The tdt and other family-based tests for linkage disequilibrium and association
-
Spielman, R. and Ewens, W. (1996). The tdt and other family-based tests for linkage disequilibrium and association. American Journal of Human Genetics 59, 983-989.
-
(1996)
American Journal of Human Genetics
, vol.59
, pp. 983-989
-
-
Spielman, R.1
Ewens, W.2
-
46
-
-
1642313766
-
A new algorithm for haplotype-based association analysis: The stochastic-em algorithm
-
Tregouet, D., Escolano, S., Tiret, L., Mallet, A. and Golmard, J. (2004). A new algorithm for haplotype-based association analysis: the stochastic-em algorithm. Annals of Human Genetics 68, 165-177.
-
(2004)
Annals of Human Genetics
, vol.68
, pp. 165-177
-
-
Tregouet, D.1
Escolano, S.2
Tiret, L.3
Mallet, A.4
Golmard, J.5
-
47
-
-
0345269986
-
On the identification of disease mutations by the analysis of haplotype similarity and goodness of fit
-
Tzeng, J.-Y., Devlin, B., Wasserman, L. and Roeder, K. (2003). On the identification of disease mutations by the analysis of haplotype similarity and goodness of fit. American Journal of Human Genetics 72, 891-902.
-
(2003)
American Journal of Human Genetics
, vol.72
, pp. 891-902
-
-
Tzeng, J.-Y.1
Devlin, B.2
Wasserman, L.3
Roeder, K.4
-
48
-
-
0345689434
-
Sum statistics for the joint detection of multiple disease loci in case-control association studies with snp markers
-
Wille, A., Hoh, J. and Ott, J. (2003). Sum statistics for the joint detection of multiple disease loci in case-control association studies with snp markers. Genetic Epidemiology 25, 350-359.
-
(2003)
Genetic Epidemiology
, vol.25
, pp. 350-359
-
-
Wille, A.1
Hoh, J.2
Ott, J.3
-
49
-
-
0000929750
-
Systems of mating
-
Wright, S. (1921). Systems of mating. Genetics 6, 111-178.
-
(1921)
Genetics
, vol.6
, pp. 111-178
-
-
Wright, S.1
-
50
-
-
0038059014
-
Analysis of multiple single nucleotide polymorphisms of candidate genes related to coronary heart disease susceptibility by using support vector machines
-
Yoon, Y., Song, J., Hong, S. and Kim, J. (2003). Analysis of multiple single nucleotide polymorphisms of candidate genes related to coronary heart disease susceptibility by using support vector machines. Clinical Chemestry and Laboratory Medecine 41, 529-534.
-
(2003)
Clinical Chemestry and Laboratory Medecine
, vol.41
, pp. 529-534
-
-
Yoon, Y.1
Song, J.2
Hong, S.3
Kim, J.4
|