Novel (Bio)chemical and (Photo)physical probes for imaging living cells

Supramolecular Structure and Function 8

Volumn , Issue , 2005, Pages 99-118

  Jares Erijman, Elizabeth A ^a   Spagnuolo, Carla ^a   Giordano, Luciana ^a   Etchehon, Maria ^a   Kawior, Jennifer ^a   Mañalich Arana, Maria V ^a   Bossi, Mariano ^a   Lidke, Diane S ^b   Post, Janine N ^b   Vermeij, Rudolf J ^b   Heintzmann, Rainer ^b   Lidke, Keith A ^b   Arndt Jovin, Donna J ^b   Jovin, Thomas M ^b  

^a UNIVERSIDAD DE BUENOS AIRES   (Argentina)

^b MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 33748552242     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/0-306-48662-8_6     Document Type: Chapter

References (44)

1. Yarden Y.; Slikowski M.X.; 2001 Untangling the ErbB signalling network. Nat. Rev. Mol. Cell Biol. 2: 127-137.
2. Clynes R.A.; Towers T.L.; Presta L.G.; Ravetch J.V.; 2000 Inhibitory Fc receptors modulate in vivo cytotoxicity against tumor targets. Nature Med. 6: 443-446.
3. Prasher D.C.; Eckenrode V.K.; Ward W.W.; Prendergast F.G.; Cormier M.J.; 1992 Primary structure of the Aequorea-victoria green fluorescent protein. Gene 111: 229-233.
4. Zhang J.; Campbell R.E.; Ting A.Y.; Tsien R.Y.; 2002 Creating new fluorescent probes for cell biology. Nat. Rev. Mol. Cell Biol. 3: 906-918.
5. Lippincott-Schwartz J.; Patterson G.H.; 2003 Development and use of fluorescent protein markers in living cells. Science 300: 87-91.
6. Miyawaki A.; 2003 Visualization of the spatial and temporal dynamics of intracellular signaling. Dev. Cell 4: 295-305.
7. Sato M.; Ozawa T.; Inukai K.; Asano T.; Umezawa Y.; 2002 Fluorescent indicators for imaging protein phosphorylation in single living cells. Nat. Biotechnol. 20: 287-294.
8. Zacharias D.A.; Violin J.D.; Newton A.C.; Tsien R.Y.; 2002 Partitioning of lipidmodified monomeric GFPs into membrane microdomains of live cells. Science 296: 913-916.
9. Zeytun A.; Jeromin Scalettar B.A.; Waldo G.S.; Bradbury A.R.M.; 2003 Fluorobodies combine GFP fluorescence with the binding characteristics of antibodies. Nat. Biotechnol. 21: 1473-1479.
10. Kurokawa K.; Mochizuki N.; Ohba Y.; Mizuno H.; Miyawaki A.; Matsuda M.; 2001 A pair of fluorescent resonance energy transfer-based probes for tyrosine phosphorylation of the CrkII adaptor protein in vivo. J. Biol. Chem. 276:31305-31310.
11. Wiedenmann J.; Schenk A.; Röcker C.; Girod A.; Spindler K.-D.; Nienhaus G.U.; 2002 A far-red fluorescent protein with fast maturation and reduced oligomerization tendency from Entacmea quadricolor (Anthoza Actinaria). Proc. Nat. Acad. Sci. U.S.A. 99: 11646-11651.
12. Patterson G.H.; Lippincott-Schwartz J.; 2002 A photoactivatable GFP for selective photolabeling of proteins and cells. Science 297:1873-1877.
13. Haker A.; Hendriks J.; van Stokkum I.H.M.; Heberle J.; Hellingwerf K.J.; Crielaard W.; Genach T.; 2003 Two photocycles of photoactive yellow protein from Rhodobacter sphaeroides. J. Biol. Chem. 278: 8442-8451.
14. Nagai T.; Ibata K.; Park E.S.; Kubota M.; Mikoshiba K.; Miyawaki A.; 2002 A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat. Biotechnol. 20: 87-90.
15. Griesbeck O.; Baird G.S.; Campbell R.E.; Zacharias D.A.; Tsien R.Y.; 2001 Reducing the environmental sensitivity of yellow fluorescent protein. J. Biol. Chem. 276: 29188-29194.
16. Campbell R.E.; Tour O.; Palmer A.E.; Steinbach P.A.; Baird G.S.; Zacharias D.A.; Tsien R.Y.; 2002 A monomeric red fluorescent protein. Proc. Nat. Acad. Sci. U.S.A. 99: 7877-7882.
17. Miyawaki A.; Llopis J.; Heim R.; McCaffery J.M.; Adams J.A.; Ikura M.; Tsien R.Y.; 1997 Fluorescent indicators for Ca2+based on green fluorescent proteins and calmodulin. Nature 388: 882-887.
18. Jares-Erijman E.A.; Jovin T.M.; 2003 FRET imaging. Nat. Biotechnol. 21: 1387-1395.
19. Clegg R.M.; 1995 Fluorescence resonance energy transfer. Curr. Opin. Biotechn. 6: 103-110.
20. Clegg R.M.; Gadella Jr.; T.W.J.; Jovin T.M.; 1994 Lifetime-resolved fluorescence imaging. Proc. SPIE 2137: 105-118.
21. Patterson G.H.; Piston D.W.; Barisas B.G.; 2000 Forster distances between green fluorescent protein pairs. Anal. Biochem. 284: 438-440.
22. Hu C.D.; Kerppola T.K.; 2003 Simultaneous visualization of multiple protein interactions in living cells using multicolor fluorescence complementation analysis. Nat. Biotechnol. 21: 539-545.
23. Ozawa T.; Umezawa Y.; 2002 Peptide assemblies in living cells. Methods for detecting protein-protein interactions. Supramol. Chem. 14: 271-280.
24. Marriott G.; Parker I.; eds.; 2003 Methods Enzymol. Biophotonics Part B. 361 Academic Press San Diego CA.
25. Riven I.; Kalmanzon E.; Segev L.; Reuveny E.; 2003 Conformational rearrangements associated with the gating of the G protein-coupled potassium channel revealed. Neuron 38: 225-235.
26. Griffin B.A.; Adams S.R.; Jones J.; Tsien R.Y.; 2000 Fluorescent labeling of recombinant proteins in living cells with FlAsH. Methods Enzymol. 327: 565-578.
27. Gaietta G.; Deerinck T.J.; Adams S.R.; Bouwer J.; Tour O.; Laird D.W.; Sosinsky G.E.; Tsien R.Y.; Ellisman M.H.; 2002 Multicolor and electron microscopic imaging of connexin trafficking. Science 296: 503-507.
28. Falk M.M.; 2002 Genetic tags for labelling live cells: gap junctions and beyond. Trends Cell Biol. 12: 399-404.
29. Stroffekova K.; Proenza C.; Beam K.G.; 2001 The protein-labelling reagent F1AsHEDT2 binds not only to CCXXCC motifs but also non-specifically to endogenous cysteine-rich proteins. Eur. J. Physiol. 442: 859-866.
30. Giordano L.; Jovin T.M.; Irie M.; Jares-Erijman E.A.; 2002 Diheteroarylethenes as thermally stable photoswitchable acceptors in photochromic fluorescence resonance energy transfer (pcFRET). J. Am. Chem. Soc. 124: 7481-7489.
31. Song L.; Jares-Erijman E.A.; Jovin T.M.; 2002 A photochromic acceptor as a reversible light-driven switch in fluorescence resonance energy transfer (FRET). J. Photochem. Photobiol. A 150: 177-185.
32. Clayton A.H.A.; Hanley Q.S.; Arndt-Jovin D.J.; Subramaniam V.; Jovin T.M.; 2002 Dynamic fluorescence anisotropy imaging microscopy in the frequency domain (rFLIM). Biophys. J. 83: 1631-1649.
33. Lidke D.S.; Nagy P.; Barisas B.G.; Heintzmann R.; Post J.N.; Lidke K.A.; Clayton A.H.A.; Arndt-Jovin D.J.; Jovin T.M.; 2003 Imaging molecular interactions in cells by dynamic and static fluorescence anisotropy (rFLIM and emFRET). Biochem. Soc. Trans. 31: 1020-1027.
34. Schlessinger J.; 2002 Ligand-induced receptor-mediated dimerization and activation of EGF receptor. Cell 110:669-672.
35. Gadella Jr.; T.W.J.; Jovin T.M.; 1995 Oligomerization of epidermal growth factor receptors on A431 cells studied by time-resolved fluorescence imaging microscopy: A stereochemical model for tyrosine kinase receptor activation. J. Cell Biol. 129: 1543-1558.
36. Wu X.; Liu H.; Liu J.; Haley K.N.; Treadway J.A.; Larson J.P.; Ge N.; Peale F.; Bruchez M.P.; 2003 Immunofluorescent labeling of cancer marker Her2 and other cellular targets with semiconductor quantum dots. Nat Biotechnol. 21: 41-46.
37. Jaiswal J.K.; Mattoussi H.; Mauro J.M.; Simon S.M.; 2003 Long-term multiple color imaging of live cells using quantum dot bioconjugates. Nat. Biotechnol. 21: 47-51.
38. Larson D.R.; Zipfel W.R.; Williams R.M.; Clark S.W.; Bruchez M.P.; Wise F.W.; Webb W.W.; 2003 Water-soluble quantum dots for multiphoton fluorescence imaging in vivo. Science 300: 1434-1436.
39. Lidke D.S.; Nagy P.; Heintzmann R.; Arndt-Jovin D.J.; Post J.N.; Grecco H.; Jares- Erijman E.A.; Jovin T.M.; 2004 Quantum dot ligands provide new insights into erbB/HER receptor-mediated signal transduction. Nat. Biotechnol.; in press (DOI: 10.1038/Nbt1929).
40. Medintz I.L.; Trammell S.A.; Mattoussi H.; Mauro J.M.; 2004 Reversible modulation of quantum dot photoluminescence using a protein-bound photochromic fluorescence resonance energy transfer acceptor. J. Am. Chem. Soc. 126: 30-31.
41. Clapp A.R.; Medintz I.L.; Mauro J.M.; Fisher B.R.; Bawendi M.G.; Mattoussi H.; 2004 Fluorescence Resonance Energy Transfer between Quantum Dot donors and dye-labeled protein acceptors. J. Am. Chem. Soc. 126:301-310.
42. Brock R.; Jovin T.; 2003 Quantitative image analysis of cellular protein translocation induced by magnetic microspheres: application to the EGF receptor. Cytometry A 52A: 1-11.
43. Brock R.; Jovin T.M.; 2001 Heterogeneity of signal transduction at the subcellular level: microsphere-based focal EGF receptor activation and stimulation of Shc translocation. J. Cell Sci. 114:2437-2447.
44. Verveer P.J.; Wouters F.S.; Reynolds A.R.; Bastiaens P.I.H.; 2000 Quantitative imaging of lateral ErbB1 receptor signal propagation in the plasma membrane. Science 290: 1567-1570.