Evaluation of a rapid DNA extraction method to detect yeast cells by PCR in orange juice

Food Control

Volumn 18, Issue 1, 2007, Pages 33-39

  Ros Chumillas, Maria ^a   Egea Cortines, Marcos ^a   Lopez Gomez, Antonio ^a   Weiss, Julia ^a  

^a TECHNICAL UNIVERSITY OF CARTAGENA   (Spain)

Author keywords

DNA extraction; PCR; Saccharomyces cerevisiae

Indexed keywords

FUNGI;

EID: 33745364710     PISSN: 09567135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.foodcont.2005.08.004     Document Type: Article

References (20)

1. Arias C.R., Burns J.K., Friedrich L.M., Goodrich R.M., and Parish M.E. Yeast species associated with orange juice: evaluation of different identification methods. Applied and Environment Microbiology 68 (2002) 1955-1961
2. Borst A., Leverstein-Van Hall M.A., Verhoef J., and Fluit A.C. Detection of Candida spp. in blood cultures using nucleic acid sequence-based amplification (NASBA). Diagnostic Microbiology and Infectious Disease 39 (2001) 155-160
3. Casey G.D., and Dobson A.D. Potential of using real-time PCR-based detection of spoilage yeast in fruit juice-a preliminary study. International Journal of Food Microbiology 91 (2004) 327-335
4. de Boer E., and Beumer R.R. Methodology for detection and typing of foodborne microorganisms. International Journal of Food Microbiology 50 (1999) 119-130
5. Gould G.W. Methods for preservation and extension of shelf life. International Journal of Food Microbiology 33 (1996) 51-64
6. Haugland R.A., Brinkman N., and Vesper S.J. Evaluation of rapid DNA extraction methods for the quantitative detection of fungi using real-time PCR analysis. Journal of Microbiological Methods 50 (2002) 319-323
7. Las Heras-Vazquez F.J., Mingorance-Cazorla L., Clemente-Jimenez J.M., and Rodriguez-Vico F. Identification of yeast species from orange fruit and juice by RFLP and sequence analysis of the 5.8S rRNA gene and the two internal transcribed spacers. FEMS Yeast Research 3 (2003) 3-9
8. Loureiro V. Spoilage yeasts in foods and beverages: characterization and ecology for improved diagnosis and control. Food Research International 33 (2002) 247-256
9. Loureiro V., and Malfeito-Ferreira M. Spoilage yeasts in the wine industry. International Journal of Food Microbiology 86 (2003) 23-50
10. Malacrino P., Zapparoli G., Torriani S., and Dellaglio F. Rapid detection of viable yeasts and bacteria in wine by flow cytometry. Journal of Microbiological Methods 45 (2001) 127-134
11. Ogunjimi A.A., and Choudary P.V. Adsorption of endogenous polyphenols relieves the inhibition by fruit juices and fresh produce of immuno-PCR detection of Escherichia coli 0157:H7. FEMS Immunology and Medical Microbiology 23 (1999) 213-220
12. Pascual M.R., and Calderón V. Microbiología Alimentaria (2000), Díaz de Santos, Madrid
13. Pitt J.I., and Hocking A.D. Fungi and food spoilage (1985), Academic Press, Sydney
14. Porebski S., Bailey L.G., and Baum B.R. Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Molecular Biology Reporter 15 (1997) 8-15
15. Rossen L., Norskov P., Holmstrom K., and Rasmussen O.F. Inhibition of PCR by components of food samples, microbial diagnostic assays and DNA-extraction solutions. International Journal of Food Microbiology 17 (1992) 37-45
16. Saghai-Maroof M.A., Soliman K.M., Jorgensen R.A., and Allard R.W. Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. Proceedings of the National Academy of Sciences of the United States of America 81 (1984) 8014-8018
17. Thornton C.G., and Passen S. Inhibition of PCR amplification by phytic acid, and treatment of bovine fecal specimens with phytase to reduce inhibition. Journal of Microbiological Methods 59 (2004) 43-52
18. van der Vossen J.M., and Hofstra H. DNA based typing, identification and detection systems for food spoilage microorganisms: development and implementation. International Journal of Food Microbiology 33 (1996) 35-49
19. White T.J., Bruns T., Lee S., and Tayler J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. A guide to methods and applications. In: Innis M.A., Gelfand D.H., Sninsky J.J., and White T.T. (Eds). PCR protocols (1990), Academic Press, San Diago, CA 315-322
20. Yan L., and Iwasaki H. Fractal aggregation of DNA after Thermal denaturation. Chaos, Solitons and Fractals 20 (2004) 877-881