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Volumn 90, Issue 8, 2006, Pages 2890-2902

Dynamics of the emission spectrum of a single LH2 complex: Interplay of slow and fast nuclear motions

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONFORMATION; CORRELATION ANALYSIS; DYNAMICS; ENERGY TRANSFER; EXCITATION; LIGHT HARVESTING SYSTEM; MATHEMATICAL ANALYSIS; PHONON; QUANTITATIVE ANALYSIS; THEORETICAL MODEL;

EID: 33646172954     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.105.072652     Document Type: Article
Times cited : (100)

References (43)
  • 3
    • 0037424652 scopus 로고    scopus 로고
    • The structure and thermal motion of the B800-850 LH2 complex from Rps. acidophila at 2.0 Å resolution and 100 K: New structural features and functionally relevant motions
    • Papiz, M. Z., S. M. Prince, T. Howard, R. J. Cogdell, and N. W. Isaacs. 2003. The structure and thermal motion of the B800-850 LH2 complex from Rps. acidophila at 2.0 Å resolution and 100 K: new structural features and functionally relevant motions. J. Mol. Biol. 326:1523-1538.
    • (2003) J. Mol. Biol. , vol.326 , pp. 1523-1538
    • Papiz, M.Z.1    Prince, S.M.2    Howard, T.3    Cogdell, R.J.4    Isaacs, N.W.5
  • 4
    • 0000220848 scopus 로고    scopus 로고
    • Photosynthetic light-harvesting: Reconciling dynamics and structure of purple bacterial LH2 reveals function of photosynthetic unit
    • Sundström, V., T. Pullerits, and R. van Grondelle. 1999. Photosynthetic light-harvesting: reconciling dynamics and structure of purple bacterial LH2 reveals function of photosynthetic unit. J. Phys. Chem. B. 103:2327-2346.
    • (1999) J. Phys. Chem. B , vol.103 , pp. 2327-2346
    • Sundström, V.1    Pullerits, T.2    Van Grondelle, R.3
  • 5
    • 0035909829 scopus 로고    scopus 로고
    • Dynamics of excitation energy transfer in the LH1 and LH2 light-harvesting complexes of photosynthetic bacteria
    • van Grondelle, R., and V. Novoderezhkin. 2001. Dynamics of excitation energy transfer in the LH1 and LH2 light-harvesting complexes of photosynthetic bacteria. Biochemistry. 40:15057-15068.
    • (2001) Biochemistry , vol.40 , pp. 15057-15068
    • Van Grondelle, R.1    Novoderezhkin, V.2
  • 7
    • 0031233117 scopus 로고    scopus 로고
    • Multiple exciton coherence sizes in photosynthetic antenna complexes viewed by pump-probe spectroscopy
    • Meier, T., V. Chernyak, and S. Mukamel. 1997. Multiple exciton coherence sizes in photosynthetic antenna complexes viewed by pump-probe spectroscopy. J. Phys. Chem. B. 101:7332-7342.
    • (1997) J. Phys. Chem. B , vol.101 , pp. 7332-7342
    • Meier, T.1    Chernyak, V.2    Mukamel, S.3
  • 8
    • 0001025781 scopus 로고    scopus 로고
    • Exciton (de)localization in the LH2 antenna of Rhodobacter sphaeroides as revealed by relative difference absorption measurements of the LH2 antenna and the B820 subunit
    • Novoderezhkin, V., R. Monshouwer, and R. van Grondelle. 1999. Exciton (de)localization in the LH2 antenna of Rhodobacter sphaeroides as revealed by relative difference absorption measurements of the LH2 antenna and the B820 subunit. J. Phys. Chem. B. 103:10540-10548.
    • (1999) J. Phys. Chem. B , vol.103 , pp. 10540-10548
    • Novoderezhkin, V.1    Monshouwer, R.2    Van Grondelle, R.3
  • 9
    • 0035859428 scopus 로고    scopus 로고
    • Exciton delocalization in the B850 light-harvesting complex: Comparison of different measures
    • Dahlbom, M., T. Pullerits, S. Mukamel, and V. Sundström. 2001. Exciton delocalization in the B850 light-harvesting complex: comparison of different measures. J. Phys. Chem. B. 105:5515-5524.
    • (2001) J. Phys. Chem. B , vol.105 , pp. 5515-5524
    • Dahlbom, M.1    Pullerits, T.2    Mukamel, S.3    Sundström, V.4
  • 10
  • 11
    • 0035129558 scopus 로고    scopus 로고
    • Spectroscopy on the B850 band of individual light-harvesting 2 complexes of Rhodopseudomonas acidophila. I. Experiments and Monte Carlo simulations
    • Ketelaars, M., A. M. van Oijen, M. Matsushita, J. Köhler, J. Schmidt, and T. J. Aartsma. 2001. Spectroscopy on the B850 band of individual light-harvesting 2 complexes of Rhodopseudomonas acidophila. I. Experiments and Monte Carlo simulations. Biophys. J. 80:1591-1603.
    • (2001) Biophys. J. , vol.80 , pp. 1591-1603
    • Ketelaars, M.1    Van Oijen, A.M.2    Matsushita, M.3    Köhler, J.4    Schmidt, J.5    Aartsma, T.J.6
  • 12
    • 0035116151 scopus 로고    scopus 로고
    • Spectroscopy on the B850 band of individual light-harvesting 2 complexes of Rhodopseudomonas acidophila. II. Exciton states of an elliptically deformed ring aggregate
    • Matsushita, M., M. Ketelaars, A. M. van Oijen, J. Köhler, T. J. Aartsma, and J. Schmidt. 2001. Spectroscopy on the B850 band of individual light-harvesting 2 complexes of Rhodopseudomonas acidophila. II. Exciton states of an elliptically deformed ring aggregate. Biophys. J. 80:1604-1614.
    • (2001) Biophys. J. , vol.80 , pp. 1604-1614
    • Matsushita, M.1    Ketelaars, M.2    Van Oijen, A.M.3    Köhler, J.4    Aartsma, T.J.5    Schmidt, J.6
  • 13
    • 0033575392 scopus 로고    scopus 로고
    • Unraveling the electronic structure of individual photosynthetic pigment-protein complexes
    • van Oijen, A. M., M. Ketelaars, J. Köhler, T. J. Aartsma, and J. Schmidt. 1999. Unraveling the electronic structure of individual photosynthetic pigment-protein complexes. Science. 285:400-402.
    • (1999) Science , vol.285 , pp. 400-402
    • Oijen, A.M.1    Ketelaars, M.2    Köhler, J.3    Aartsma, T.J.4    Schmidt, J.5
  • 14
    • 0346103676 scopus 로고    scopus 로고
    • Direct observation of tiers in the energy landscape of a chromoprotein: A single-molecule study
    • Hofmann, C., T. J. Aartsma, H. Michel, and J. Köhler. 2003. Direct observation of tiers in the energy landscape of a chromoprotein: a single-molecule study. Proc. Natl. Acad. Sci. USA. 100:15534-15538.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 15534-15538
    • Hofmann, C.1    Aartsma, T.J.2    Michel, H.3    Köhler, J.4
  • 15
    • 0035876215 scopus 로고    scopus 로고
    • High-resolution AFM topographs of Rubrivivax gelatinosus light-harvesting complex LH2
    • Scheuring, S., F. Reiss-Husson, A. Engel, J. L. Rigaud, and J. L. Ranck. 2001. High-resolution AFM topographs of Rubrivivax gelatinosus light-harvesting complex LH2. EMBO J. 20:3029-3035.
    • (2001) EMBO J. , vol.20 , pp. 3029-3035
    • Scheuring, S.1    Reiss-Husson, F.2    Engel, A.3    Rigaud, J.L.4    Ranck, J.L.5
  • 16
    • 11244305406 scopus 로고    scopus 로고
    • Fluorescence spectroscopy of conformational changes of single LH2 complexes
    • Rutkauskas, D., V. Novoderezhkin, R. J. Cogdell, and R. van Grondelle. 2005. Fluorescence spectroscopy of conformational changes of single LH2 complexes. Biophys. J. 88:422-435.
    • (2005) Biophys. J. , vol.88 , pp. 422-435
    • Rutkauskas, D.1    Novoderezhkin, V.2    Cogdell, R.J.3    Van Grondelle, R.4
  • 17
    • 11244296662 scopus 로고    scopus 로고
    • Fluorescence spectral fluctuations of single LH2 complexes from Rhodopseudomonas acidophila strain 10050
    • Rutkauskas, D., V. Novoderezkhin, R. J. Cogdell, and R. van Grondelle. 2004. Fluorescence spectral fluctuations of single LH2 complexes from Rhodopseudomonas acidophila strain 10050. Biochemistry. 43:4431-4438.
    • (2004) Biochemistry , vol.43 , pp. 4431-4438
    • Rutkauskas, D.1    Novoderezkhin, V.2    Cogdell, R.J.3    Van Grondelle, R.4
  • 19
    • 0032495969 scopus 로고    scopus 로고
    • Exciton-migration and three-pulse femtosecond optical spectroscopies of photosynthetic antenna complexes
    • Zhang, W. M., T. Meier, V. Chernyak, and S. Mukamel. 1998. Exciton-migration and three-pulse femtosecond optical spectroscopies of photosynthetic antenna complexes. J. Chem. Phys. 108:7763-7774.
    • (1998) J. Chem. Phys. , vol.108 , pp. 7763-7774
    • Zhang, W.M.1    Meier, T.2    Chernyak, V.3    Mukamel, S.4
  • 20
    • 0035935380 scopus 로고    scopus 로고
    • Ultrafast exciton dynamics of J-aggregates in room temperature solution studied by third-order nonlinear optical spectroscopy and numerical simulation based on exciton theory
    • Ohta, K., M. Yang, and G. R. Fleming. 2001. Ultrafast exciton dynamics of J-aggregates in room temperature solution studied by third-order nonlinear optical spectroscopy and numerical simulation based on exciton theory. J. Chem. Phys. 115:7609-7621.
    • (2001) J. Chem. Phys. , vol.115 , pp. 7609-7621
    • Ohta, K.1    Yang, M.2    Fleming, G.R.3
  • 21
    • 0036228191 scopus 로고    scopus 로고
    • The quantitative relationship between structure and polarized spectroscopy in the FMO complex of Prosthecochloris aestuarii: Refining experiments and simulations
    • Wendling, M., M. A. Przyjalgowski, D. Gullen, S. I. E. Vulto, T. J. Aartsma, R. van Grondelle, and H. van Amerongen. 2002. The quantitative relationship between structure and polarized spectroscopy in the FMO complex of Prosthecochloris aestuarii: refining experiments and simulations. Photosynth. Res. 71:99-123.
    • (2002) Photosynth. Res. , vol.71 , pp. 99-123
    • Wendling, M.1    Przyjalgowski, M.A.2    Gullen, D.3    Vulto, S.I.E.4    Aartsma, T.J.5    Van Grondelle, R.6    Van Amerongen, H.7
  • 22
    • 0037149164 scopus 로고    scopus 로고
    • Photophysical properties of PS-2 reaction centers and a discrepancy in exciton relaxation times
    • Renger, T., and R. A. Marcus. 2002. Photophysical properties of PS-2 reaction centers and a discrepancy in exciton relaxation times. J. Phys. Chem. B. 106:1809-1819.
    • (2002) J. Phys. Chem. B , vol.106 , pp. 1809-1819
    • Renger, T.1    Marcus, R.A.2
  • 23
    • 21244494763 scopus 로고    scopus 로고
    • Theory of optical spectra of photosystem II reaction centers: Location of the triplet state and the identity of the primary electron donor
    • Raszewski, G., W. Saenger, and T. Renger. 2005. Theory of optical spectra of photosystem II reaction centers: location of the triplet state and the identity of the primary electron donor. Biophys. J. 88:986-998.
    • (2005) Biophys. J. , vol.88 , pp. 986-998
    • Raszewski, G.1    Saenger, W.2    Renger, T.3
  • 24
    • 24144455262 scopus 로고    scopus 로고
    • Pathways and timescales of primary charge separation in the photosystem II reaction center as revealed by a simultaneous fit of time-resolved fluorescence and transient absorption
    • Novoderezhkin, V. I., E. G. Andrizhiyevskaya, J. P. Dekker, and R. van Grondelle. 2005. Pathways and timescales of primary charge separation in the photosystem II reaction center as revealed by a simultaneous fit of time-resolved fluorescence and transient absorption. Biophys. J. 89:1464-1481.
    • (2005) Biophys. J. , vol.89 , pp. 1464-1481
    • Novoderezhkin, V.I.1    Andrizhiyevskaya, E.G.2    Dekker, J.P.3    Van Grondelle, R.4
  • 25
    • 3442880427 scopus 로고    scopus 로고
    • Energy-transfer dynamics in the LHCII complex of higher plants: Modified Redfield approach
    • Novoderezhkin, V. I., M. A. Palacios, H. van Amerongen, and R. van Grondelle. 2004. Energy-transfer dynamics in the LHCII complex of higher plants: modified Redfield approach. J. Phys. Chem. B. 108:10363-10375.
    • (2004) J. Phys. Chem. B , vol.108 , pp. 10363-10375
    • Novoderezhkin, V.I.1    Palacios, M.A.2    Van Amerongen, H.3    Van Grondelle, R.4
  • 26
    • 20344401549 scopus 로고    scopus 로고
    • Excitation dynamics in the LHCII complex of higher plants: Modeling based on the 2.72 Å crystal structure
    • Novoderezhkin, V. I., M. A. Palacios, H. van Amerongen, and R. van Grondelle. 2005. Excitation dynamics in the LHCII complex of higher plants: modeling based on the 2.72 Å crystal structure. J. Phys. Chem. B. 109:10493-10504.
    • (2005) J. Phys. Chem. B , vol.109 , pp. 10493-10504
    • Novoderezhkin, V.I.1    Palacios, M.A.2    Van Amerongen, H.3    Van Grondelle, R.4
  • 27
    • 0036142054 scopus 로고    scopus 로고
    • Influence of phonons on exciton transfer dynamics: Comparison of the Redfield, Förster, and modified Redfield equations
    • Yang, M., and G. R. Fleming. 2002. Influence of phonons on exciton transfer dynamics: comparison of the Redfield, Förster, and modified Redfield equations. Chem. Phys. 275:355-372.
    • (2002) Chem. Phys. , vol.275 , pp. 355-372
    • Yang, M.1    Fleming, G.R.2
  • 28
    • 0000450431 scopus 로고    scopus 로고
    • Electron-phonon coupling and vibronic fine structure of light-harvesting complex II of green plants: Temperature dependent absorption and high-resolution fluorescence spectroscopy
    • Peterman, E. J. G., T. Pullerits, R. van Grondelle, and H. van Amerongen. 1997. Electron-phonon coupling and vibronic fine structure of light-harvesting complex II of green plants: temperature dependent absorption and high-resolution fluorescence spectroscopy. J. Phys. Chem. B. 101:4448-4457.
    • (1997) J. Phys. Chem. B , vol.101 , pp. 4448-4457
    • Peterman, E.J.G.1    Pullerits, T.2    Van Grondelle, R.3    Van Amerongen, H.4
  • 29
    • 20644450557 scopus 로고    scopus 로고
    • Chlorophyll a Franck-Condon factors and excitation energy transfer
    • Pieper, J., J. Voigt, and G. J. Small. 1999. Chlorophyll a Franck-Condon factors and excitation energy transfer. J. Phys. Chem. B. 103:2319-2322.
    • (1999) J. Phys. Chem. B , vol.103 , pp. 2319-2322
    • Pieper, J.1    Voigt, J.2    Small, G.J.3
  • 30
    • 41349092888 scopus 로고    scopus 로고
    • Excitons in a photosynthetic light-harvesting system: A combined molecular dynamics, quantum chemistry, and polaron model study
    • Damjanovic, A., I. Kosztin, U. Kleinekathoefer, and K. Schulten. 2002. Excitons in a photosynthetic light-harvesting system: a combined molecular dynamics, quantum chemistry, and polaron model study. Phys. Rev. 65:031919.
    • (2002) Phys. Rev. , vol.65 , pp. 031919
    • Damjanovic, A.1    Kosztin, I.2    Kleinekathoefer, U.3    Schulten, K.4
  • 31
    • 36449004871 scopus 로고
    • Optical properties of disordered molecular aggregates: A numerical study
    • Fidder, H., J. Knoester, and D. A. Wiersma. 1991. Optical properties of disordered molecular aggregates: a numerical study. J. Chem. Phys. 95:7880-7890.
    • (1991) J. Chem. Phys. , vol.95 , pp. 7880-7890
    • Fidder, H.1    Knoester, J.2    Wiersma, D.A.3
  • 32
    • 0000575333 scopus 로고    scopus 로고
    • Polarons, localization, and excitonic coherence in superradiance of biological antenna complexes
    • Meier, T., Y. Zhao, V. Chernyak, and S. Mukamel. 1997. Polarons, localization, and excitonic coherence in superradiance of biological antenna complexes. J. Chem. Phys. 107:3876-3893.
    • (1997) J. Chem. Phys. , vol.107 , pp. 3876-3893
    • Meier, T.1    Zhao, Y.2    Chernyak, V.3    Mukamel, S.4
  • 33
    • 0032773631 scopus 로고    scopus 로고
    • Disordered exciton model for the core light-harvesting antenna of Rhodopseudomonas viridis
    • Novoderezhkin, V., R. Monshouwer, and R. van Grondelle. 1999. Disordered exciton model for the core light-harvesting antenna of Rhodopseudomonas viridis. Biophys. J. 77:666-681.
    • (1999) Biophys. J. , vol.77 , pp. 666-681
    • Novoderezhkin, V.1    Monshouwer, R.2    Van Grondelle, R.3
  • 34
    • 0242333927 scopus 로고    scopus 로고
    • Intra- and interband transfers in the B800-B850 antenna of Rhodospirillum molischianum: Redfield theory modeling of polarized pump-probe kinetics
    • Novoderezhkin, V., M. Wendling, and R. van Grondelle. 2003. Intra- and interband transfers in the B800-B850 antenna of Rhodospirillum molischianum: Redfield theory modeling of polarized pump-probe kinetics. J. Phys. Chem. B. 107:11534-11548.
    • (2003) J. Phys. Chem. B , vol.107 , pp. 11534-11548
    • Novoderezhkin, V.1    Wendling, M.2    Van Grondelle, R.3
  • 35
    • 0037461515 scopus 로고    scopus 로고
    • Current status of single-molecule spectroscopy: Theoretical aspects
    • Jung, Y., E. Barkai, and R. J. Silbey. 2002. Current status of single-molecule spectroscopy: theoretical aspects. J. Chem. Phys. 117:10980-10995.
    • (2002) J. Chem. Phys. , vol.117 , pp. 10980-10995
    • Jung, Y.1    Barkai, E.2    Silbey, R.J.3
  • 36
    • 0035827162 scopus 로고    scopus 로고
    • Single molecule spectroscopy of disordered circular aggregates: A perturbation analysis
    • Dempster, S. E., S. J. Jang, and R. J. Silbey. 2001. Single molecule spectroscopy of disordered circular aggregates: a perturbation analysis. J. Chem. Phys. 114:10015-10023.
    • (2001) J. Chem. Phys. , vol.114 , pp. 10015-10023
    • Dempster, S.E.1    Jang, S.J.2    Silbey, R.J.3
  • 37
    • 0038617363 scopus 로고    scopus 로고
    • Single complex line shapes of the B850 band of LH2
    • Jang, S., and R. J. Silbey. 2003. Single complex line shapes of the B850 band of LH2. J. Chem. Phys. 118:9324-9336.
    • (2003) J. Chem. Phys. , vol.118 , pp. 9324-9336
    • Jang, S.1    Silbey, R.J.2
  • 38
    • 0030454380 scopus 로고    scopus 로고
    • Structure-based calculations of the optical spectra of the LH2 bacteriochlorophyll-protein complex from Rhodopseudomonas acidophila
    • Sauer, K., R. J. Cogdell, S. M. Prince, A. Freer, N. W. Isaacs, and H. Scheer. 1996. Structure-based calculations of the optical spectra of the LH2 bacteriochlorophyll-protein complex from Rhodopseudomonas acidophila. Photochem. Photobiol. 64:564-576.
    • (1996) Photochem. Photobiol. , vol.64 , pp. 564-576
    • Sauer, K.1    Cogdell, R.J.2    Prince, S.M.3    Freer, A.4    Isaacs, N.W.5    Scheer, H.6
  • 39
    • 5244255059 scopus 로고    scopus 로고
    • Calculations of spectroscopic properties of the LH2 bacteriochlorophyll-protein antenna complex from Rhodopseudomonas acidophila
    • Alden, R. G., E. Johnson, V. Nagarajan, W. W. Parson, C. J. Law, and R. J. Cogdell. 1997. Calculations of spectroscopic properties of the LH2 bacteriochlorophyll-protein antenna complex from Rhodopseudomonas acidophila. J. Phys. Chem. B. 101:4667-4680.
    • (1997) J. Phys. Chem. B , vol.101 , pp. 4667-4680
    • Alden, R.G.1    Johnson, E.2    Nagarajan, V.3    Parson, W.W.4    Law, C.J.5    Cogdell, R.J.6
  • 40
    • 33751155100 scopus 로고
    • Excitation transfer in the core light-harvesting complex (LH1) of Rhodobacter sphaeroides: An ultrafast fluorescence depolarization and annihilation study
    • Bradforth, S. E., R. Jimenez, F. van Mourik, R. van Grondelle, and G. R. Fleming. 1995. Excitation transfer in the core light-harvesting complex (LH1) of Rhodobacter sphaeroides: an ultrafast fluorescence depolarization and annihilation study. J. Phys. Chem. 99:16179-16191.
    • (1995) J. Phys. Chem. , vol.99 , pp. 16179-16191
    • Bradforth, S.E.1    Jimenez, R.2    Van Mourik, F.3    Van Grondelle, R.4    Fleming, G.R.5
  • 41
    • 1542747447 scopus 로고    scopus 로고
    • Electronic excitation transfer in the LH2 complex of Rhodobacter sphaeroides
    • Jimenez, R., S. N. Dikshit, S. E. Bradforth, and G. R. Fleming. 1996. Electronic excitation transfer in the LH2 complex of Rhodobacter sphaeroides. J. Phys. Chem. 100:6825-6834.
    • (1996) J. Phys. Chem. , vol.100 , pp. 6825-6834
    • Jimenez, R.1    Dikshit, S.N.2    Bradforth, S.E.3    Fleming, G.R.4
  • 42
    • 0034506514 scopus 로고    scopus 로고
    • Statistics of optical spectra from single-ring aggregates and its application to LH2
    • Mostovoy, M. V., and J. Knoester. 2000. Statistics of optical spectra from single-ring aggregates and its application to LH2. J. Phys. Chem. B. 104:12355-12364.
    • (2000) J. Phys. Chem. B , vol.104 , pp. 12355-12364
    • Mostovoy, M.V.1    Knoester, J.2
  • 43
    • 0031234202 scopus 로고    scopus 로고
    • Superradiance and exciton delocalization in bacterial photosynthetic light-harvesting systems
    • Monshouwer, R., M. Abrahamsson, F. van Mourik, and R. van Grondelle. 1997. Superradiance and exciton delocalization in bacterial photosynthetic light-harvesting systems. J. Phys. Chem. B. 101:7241-7248.
    • (1997) J. Phys. Chem. B , vol.101 , pp. 7241-7248
    • Monshouwer, R.1    Abrahamsson, M.2    Van Mourik, F.3    Van Grondelle, R.4


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