Polyphyly of the hawk genera Leucopternis and Buteogallus (Aves, Accipitridae): Multiple habitat shifts during the Neotropical buteonine diversification

BMC Evolutionary Biology

Volumn 6, Issue , 2006, Pages

  Raposo Do Amaral, Fabio S ^a   Miller, Matthew J ^b   Silveira, Luís Fábio ^a   Bermingham, Eldredge ^b   Wajntal, Anita ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b SMITHSONIAN TROPICAL RESEARCH INSTITUTE   (Panama)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CELL LINEAGE; CLADISTICS; EVALUATION; EVOLUTION; HABITAT STRUCTURE; HAWK; HYPOTHESIS; MOLECULAR EVOLUTION; NEOTROPICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; POLYPHYLY; SPECIES COMPOSITION; SPECIES IDENTIFICATION; TAXONOMY;

ACCIPITRIDAE; ACCIPITRINAE; AVES; BUTEO; BUTEO BUTEO; BUTEOGALLUS; BUTEOGALLUS MERIDIONALIS; BUTEOGALLUS URUBITINGA; CICONIIFORMES; HARPYHALIAETUS CORONATUS; LEUCOPTERNIS; LEUCOPTERNIS ALBICOLLIS; LEUCOPTERNIS KUHLI; LEUCOPTERNIS MELANOPS; LEUCOPTERNIS OCCIDENTALIS;

EID: 33645289664     PISSN: 14712148     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-6-10     Document Type: Article

References (80)

1. Thiollay JM: Family Accipitridae (Hawks and Eagles). In Handbook of the birds of the world. New World Vultures to Guineafowl Volume 2. Edited by: Hoyo J del, Elliott A, Sargatal J. Barcelona: Lynx Edicions; 1994:52-205.
2. Sick H: Ornitologia Brasileira Rio de Janeiro: Nova Fronteira; 1997.
3. Amadon D: Taxonomic notes on birds of prey. Amer Mus Novit 1964, 2166:1-24.
4. Amadon D: A revision of the sub-buteonine hawks (Accipitridae, Aves). Amer Mus Novit 1982, 2741:1-20.
5. Olson SL: The fossil record of birds. In Avian biology Volume VIII. Edited by: Farner D, King J R, Parkes K. New York:Academic Press; 1985:79-239.
6. Ferguson-Lees J, Christie DA: Raptors of the world London: Christopher Helm; 2001.
7. Riesing MJ, Kruckenhauser L, Gamauf A, Haring E: Molecular phylogeny of the genus Buteo (Aves: Accipitridae) based on mitochondrial marker sequences. Mol Phylogenet Evol 2003, 27:328-342.
8. Helbig AJ, Kocum A, Seibold I, Braun MJ: A multi-gene phylogeny of aquiline eagles (Aves: Accipitriformes) reveals extensive paraphyly at the genus level. Mol Phyl Evol 2005, 35:147-164.
9. Amadon D, Bull J: Hawks and owls of the world. A distributional and taxonomic list. Proc West Found Vert Zool 1988, 3:295-357.
10. Friedman H: The birds of North and Middle America. Part XI. Cathartidae to Falconidae Volume 50. United States National Museum Bulletin 50. Washington D.C.: Smithsonian Institution; 1950.
11. Grossman ML, Hamlet J: Birds of prey of the world New York: Bonanza Books; 1964.
12. Brown LH, Amadon D: Eagles, hawks and falcons of the world Feltham: Country Life Books; 1968.
13. Haffer J: Speciation in Amazonian forest birds. Science 1969, 165:131-137.
14. Haffer J: Time's cycle and time's arrow in the history of Amazonia. Biogeographica 1993, 69:15-45.
15. Vanzolini PE, Williams EE: South American anoles: the geographical variation and and evolution of the Anolis chrysolepis species group (Sauria, Iguanidae). Arq Zool São Paulo 1970, 19:1-298.
16. Wallace AR: On the monkeys of the Amazon. Proc Zool Soc London 1852, 20:107-110.
17. Salo J, Kalliola R, Häkkinen I, Mäkinen Y, Niemelä P, Pubakka M, Coley PD: River dynamics and the diversity of Amazon lowland forest. Nature 1986, 322:254-258.
18. Räsänen ME, Linna AM, Santos JCR, Negri FR: Late Miocene tidal deposits in the Amazonian foreland basin. Science 1995, 269:386-390.
19. Marroig G, Cerqueira R: Plio-Pleistocene South American history and the Amazon lagoon hypothesis: a piece in the puzzle of Amazonian diversification. J Comp Biol 1997, 2:103-119.
20. Nores M: An alternative hypothesis for the origin of Amazonian bird diversity. J Biogeography 1999, 26:475-485.
21. Platnick NI, Nelson GJ: A method of analysis for historical biogeography. Syst Zool 1978, 27:1-16.
22. Endler JA: Pleistocene forest refuges: fact or fancy. In Biological Diversification in the Tropics Edited by: Prance GT. New York: Columbia University Press; 1982:641-657.
23. Moritz C, Patton JL, Schneider CJ, Smith TB: Diversification of rainforest faunas: an integrated molecular approach. Annu Rev Ecol Syst 2000, 31:533-563.
24. Dick CW, Abdul-Salim K, Bermingham E: Molecular systematic analysis reveals cryptic Tertiary diversification of a widespread tropical rain forest tree. Am Nat 2003, 162:691-703.
25. Dick CW, Roubik DW, Gruber KF, Bermingham E: Long-distance gene flow and cross-Andean dispersal of lowland rainforest bees (Apidae: Euglossini) revealed by comparative mitochondrial DNA phylogeography. Mol Ecol 2004, 13:3775-3885.
26. Bildstein KL: Raptor migration in the Neotropics: patterns, processes and consequences. Ornitol Neotrop 2004:83-99.
27. Holdaway R: An exploratory phylogenetic analysis of the genera of the Accipitridae, with notes on the biogeography of the family. In Raptor conservation today: proceedings of the IV World Conference on Birds of Prey and Owls. 10-17 May 1992, Berlin Edited by: Meyburg BU, Chancellor RD. Berlin, London, Paris: Pica Press and World Working Group on Birds of Prey and Owls; 1994:601-637.
28. Lerner HRL, Mindell DP: Phylogeny of eagles, Old World vultures, and other Accipitridae based on nuclear and mitochondrial DNA. Mol Phylogenet Evol 2005, 37:327-346.
29. Pereira SL, Baker AJ: Low number of mitochondrial pseudogenes in the chicken (Gallus gallus) nuclear genome: implications for molecular inference of population history and phylogenetics. BMC Evol Biol 2004, 4:17.
30. Hellmayr CE, Conover B: Catalogue of Birds of the Americas. Field Mus Nat Hist Zool Ser 1949:13.
31. Pinto OMO: Catálogo das aves do Brasil e lista dos exemplares que as representam no Museu Paulista, 1.a Parte. Aves não Passeriformes e Passeriformes não Oscines excluida a Fam. Tyrannidae e seguintes. Rev Mus Paulista 1938, 22:1-566.
32. Plótnick R: Posicíon sistemática del género Heterospizias. Hornero 1956, 10:136-139.
33. Phelps WH, Phelps WH Jr: Lista de las aves de Venezuela con su distribucion. Tomo II. parte I. No Passeriformes. Bol Soc Venez Cienc Nat 1958, 19:1-317.
34. Meyer de Schauensee R: A guide to the birds of South America Wynnewood, Pennsylvania: Livingston Publishing; 1970.
35. Amadon D: Notes on Harpyhaliaetus. Auk 1949, 66:53-56.
36. Amadon D, Eckelberry DR: Observations of Mexican Birds. Condor 1955, 57:65-80.
37. Ridgway R: Studies of the American Falconidae. Bull U S Geol Geog Surv Terr 1876, 2:91-182.
38. Stressemann E, Amadon D: Order Falconiformes. In Check-List of Birds of the World Volume 1. 2nd edition. Edited by: Mayr E, Cottrell GW. Cambridge, Massachusetts: Museum of Comparative Zoology; 1979:271-425.
39. Sibley CG, Monroe BL Jr: Distribution and taxonomy of birds of the world New Haven and London: Yale Univ Press; 1990.
40. Haffer J: Biogeography of Neotropical birds. In Biogeography and quaternary history in tropical America Edited by: Whitmore TC, Prance GT. Oxford:Clarendon Press; 1987.
41. Omland KE, Lanyon SM: Reconstructing plumage evolution in orioles (Icterus): repeated convergence and reversal in patterns. Evolution 2000, 54:2119-2133.
42. Cheviron ZA, Hackett SJ, Capparella AP: Complex evolutionary history of a Neotropical lowland forest bird (Lepidothrix coronata) and its implications for historical hypotheses of the origin of Neotropical avian diversity. Mol Phylogenet Evol 2005, 36:338-357.
43. Chapman FM: The distribution of bird life in Colombia. Bull Am Mus Nat Hist 1917, 36:1-729.
44. Chapman FM: The distribution of bird life in Colombia. Bull Am Mus Nat Hist 1926, 55:1-784.
45. Haffer J: Speciation in Colombian forest birds west of the Andes. American Museum Novitates 1967, 294:1-57.
46. Brumfiled RT, Capparella AP: Historical diversification of birds in northwestern South America: a molecular perspective on the role of vicariant events. Evolution 1996:1607-1624.
47. Ribas CC, Gaban-Lima R, Miyaki CY, Cracraft J: Historical biogeography and diversification within the Neotropical parrot genus Pionopsitta (Aves:Psittacidae). J Biogeography 2005, 32:1409-1427.
48. Capparella AP: Genetic variation in Neotropical birds: implications for the speciation process. Acta XIX Congr Int Ornithol 1988, 19:1658-1673.
49. Aleixo A: Historical diversification of a Terra-firme forest bird superspecies: a phylogeographic perspective on the role of different hypotheses of Amazonian diversification. Evolution 2004, 58:1303-1317.
50. Barlow J, Haugaasen T, Peres C: Sympatry of the Black-faced Hawk Leucopternis melanops and the White-browed Hawk Leucopternis kuhli in the Lower Rio Tapajós, Pará, Brazil. Cotinga 2002, 18:77-79.
51. Cracraft J: Historical biogeography and patterns of differentiation within the South American avifauna: areas of endemism. Ornith Monogr 1985, 36:49-84.
52. Costa L: The historical bridge between Amazon and the Atlantic Forest of Brazil: a study of molecular phylogeography with small mammals. J Biogeography 2003, 30:71-86.
53. Garcia-Moreno J, Cardoso da Silva JM: An interplay between forest and non-forest South American avifaunas suggested by a phylogeny of Lepidocolaptes woodcreepers (Dendrocolaptidae). Stud Neotrop Fauna & Environm 1997, 32:164-173.
54. Ribas CC, Miyaki CY: Molecular systematics in Aratinga parakeets: species limits and historical biogeography in the 'solstitialis' group, and the systematic position of Nandayus nenday. Mol Phylogenet Evol 2004, 30:663-675.
55. Vanzolini PE, Williams EE: The vanishing refuge: a mechanism for ecogeographic speciation. Pap Avulsos Zoo 1981, 34:251-255.
56. Brown KS Jr: Conclusions, synthesis, and alternative hypothesis. In Biogeography and quaternary history in tropical America Edited by: Whitmore TC, Prance GT. New York: Clarendon Press; 1987:175-196.
57. Cracraft J, Prum RO: Patterns and processes of diversification: speciation and historical congruence in some Neotropical birds. Evolution 1988, 42:603-620.
58. Schneider CJ, Smith TB, Larison B, Moritz C: A test of alternative models of diversification in tropical rainforests: ecological gradients vs rainforest refugia. Proc Nat Acad Sci USA 1999, 24:13869-13873.
59. Smith TB, Wayne RK, Girman DJ, Bruford MW: A role for ecotones in generating rainforest biodiversity. Science 1997, 276:1855-1857.
60. Smith TB, Schneider CJ, Holder K: Refugial isolation versus ecological gradients. Genetica 2001, 112-113:383-398.
61. Ogden R, Thorpe RS: Molecular evidence for ecological speciation in tropical habitats. Proc Natl Acad Sci USA 2002, 99:13612-13615.
62. Smith TB, Calsbeek R, Wayne RK, Holder KH, Pires D, Bardeleben C: Testing alternative mechanisms of evolutionary divergence in an African rain forest passerine bird. J Evol Biol 2005, 18:257-268.
63. Bates JM, Hackett SJ, Cracraft J: Area-relationships in the Neotropical lowlands: a hypothesis based on raw distributions of Passerine birds. J Biogeography 1998, 25:783-793.
64. Marks BD, Hackett SJ, Capparella AP: Historical relationships among Neotropical lowland forest areas of endemism as determined by mitochondrial DNA sequence variation within the Wedge-billed Woodcreeper (Aves: Dendrocolaptidae: Glyphorynchus spirurus). Mol Phylogenet Evol 2002, 24:153-167.
65. Remsen JV Jr, Jaramillo A, Nores M, Pacheco JF, Robbins MB, Schulenberg TS, Stiles FG, da Silva JMC, Stotz DF, Zimmer KJ: A classification of the bird species of South America. American Ornithologists' Union. [http://www.museum. lsu.edu/~Remsen/SACCBaseline.html]. [Version 30 november 2005]
66. Tavares ES, Yamashita C, Miyaki CY: Phylogenetic relationships among some Neotropical parrot genera (Psittacidae) based on mitochondrial sequences. Auk 2004, 121:230-242.
67. Bruford MW, Hanotte O, Brookfield JFY, Burke T: Multi and single-locus DNA fingerprinting. In Molecular Genetic Analysis of Populations - a Practical Approach Edited by: Hoelzel AR. New York: IRL Press; 1992:225-269.
68. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG: The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997, 25:4876-4882.
69. Swofford DL: PAUP* Phylogenetic analysis using parsimony (*and other methods) Sunderland, Massachusetts: Sinauer Associates; 2002.
70. Xia X, Xie Z: DAMBE: Data analysis in molecular biology and evolution. Journal of Heredity 2001, 92:371-373.
71. Ronquist F, Huelsenbeck JP: MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
72. Posada D, Crandall KA: MODELTEST: testing the model of nucleotide substitution. Bioinformatics 1998, 14:817-818.
73. Shimodaira H, Hasegawa M: Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol Biol Evol 1999, 16:1114-1116.
74. Maddison WP, Maddison DR: Mesquite: a modular system for evolutionary analysis. Version 1.05. 1999 [http://mesquiteproject.org].
75. Miyaki CY, Matioli S, Burke T, Wajntal A: Parrot evolution and paleogeographic events: mitochondrial DNA evidence. Mol Biol Evol 1998, 15:544-551.
76. Eberhard JR, Wright TF, Bermingham E: Duplication and concerted evolution of the mitochondrial control region in the parrot genus Amazona. Mol Biol Evol 2001, 18:1330-1342.
77. Sorenson MD, Ast JC, Dimcheff DE, Yuri T, Mindell DP: Primers for a PCR-based approach to mitochondrial genome sequencing in birds and other vertebrates. Mol Phylogenet Evol 1999, 12:105-114.
78. Haring E, Kruckenhauser L, Gamauf A, Riesing MJ, Pinsker W: The complete sequence of the mitochondrial genome of Buteo buteo (Aves, Accipitridae) indicates an early split in the phylogeny of raptors. Mol Biol Evol 2001, 18:1892-1904.
79. Eberhard JR, Bermingham E: Phylogeny and biogeography of the Amazona ocrocephala (Aves:Psittacidae) complex. Auk 2004, 121:318-332.
80. Fleischer RC, Olson SL, James HF, Cooper AC: Identification of the extinct Hawaiian eagle (Haliaeetus) by mtDNA sequence analysis. Auk 2000, 117:1051-1056.