-
1
-
-
0038701684
-
Huntingtin aggregation and toxicity in Huntington's disease
-
G. Bates Huntingtin aggregation and toxicity in Huntington's disease Lancet 361 2003 1642 1644
-
(2003)
Lancet
, vol.361
, pp. 1642-1644
-
-
Bates, G.1
-
2
-
-
3543022080
-
Scrambled prion domains form prions and amyloid
-
E.D. Ross, U. Baxa, and R.B. Wickner Scrambled prion domains form prions and amyloid Mol. Cell. Biol. 24 2004 7206 7213
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 7206-7213
-
-
Ross, E.D.1
Baxa, U.2
Wickner, R.B.3
-
3
-
-
8544260320
-
Characterization of the structure and the amyloidogenic properties of the Josephin domain of the polyglutamine-containing protein ataxin-3
-
L. Masino, G. Nicastro, R.P. Menon, F. Dal Piaz, L. Calder, and A. Pastore Characterization of the structure and the amyloidogenic properties of the Josephin domain of the polyglutamine-containing protein ataxin-3 J. Mol. Biol. 344 2004 1021 1035
-
(2004)
J. Mol. Biol.
, vol.344
, pp. 1021-1035
-
-
Masino, L.1
Nicastro, G.2
Menon, R.P.3
Dal Piaz, F.4
Calder, L.5
Pastore, A.6
-
5
-
-
0037062561
-
Amyloid-like features of polyglutamine aggregates and their assembly kinetics
-
S. Chen, V. Berthelier, J.B. Hamilton, B. O'Nuallain, and R. Wetzel Amyloid-like features of polyglutamine aggregates and their assembly kinetics Biochemistry 41 2002 7391 7399
-
(2002)
Biochemistry
, vol.41
, pp. 7391-7399
-
-
Chen, S.1
Berthelier, V.2
Hamilton, J.B.3
O'Nuallain, B.4
Wetzel, R.5
-
6
-
-
0037415751
-
From Alzheimer to Huntington: Why is a structural understanding so difficult?
-
P.A. Temussi, L. Masino, and A. Pastore From Alzheimer to Huntington: why is a structural understanding so difficult? EMBO J. 22 2003 355 361
-
(2003)
EMBO J.
, vol.22
, pp. 355-361
-
-
Temussi, P.A.1
Masino, L.2
Pastore, A.3
-
7
-
-
0041656292
-
The hunt for huntingtin function: Interaction partners tell many different stories
-
P. Harjes, and E.E. Wanker The hunt for huntingtin function: interaction partners tell many different stories Tibs 28 2003 425 433
-
(2003)
Tibs
, vol.28
, pp. 425-433
-
-
Harjes, P.1
Wanker, E.E.2
-
9
-
-
0028283985
-
Glutamine repeats as polar zippers: Their possible role in inherited neurodegenerative diseases
-
M. Perutz, T. Johnson, M. Suzuki, and J.T. Finch Glutamine repeats as polar zippers: their possible role in inherited neurodegenerative diseases Proc. Natl Acad. Sci. USA 91 1994 5355 5358
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 5355-5358
-
-
Perutz, M.1
Johnson, T.2
Suzuki, M.3
Finch, J.T.4
-
10
-
-
0033450855
-
Folding of oligoglutamines: A theoretical approach based upon thermodynamics and molecular mechanics
-
E.B. Starikov, H. Lehrach, and E.E. Wanker Folding of oligoglutamines: a theoretical approach based upon thermodynamics and molecular mechanics J. Biomol. Struct. Dynam. 17 1999 409 427
-
(1999)
J. Biomol. Struct. Dynam.
, vol.17
, pp. 409-427
-
-
Starikov, E.B.1
Lehrach, H.2
Wanker, E.E.3
-
11
-
-
33645104343
-
Molecular modeling of poly-L-glutamine
-
Pinoli, M. L. & Busath, D. D. (2004). Molecular modeling of poly-l-glutamine. Biophys. J. 86 (Abstracts Supplemental, 616a).
-
(2004)
Biophys. J.
, vol.86
, Issue.ABSTRACTS SUPPL. 616A
-
-
Pinoli, M.L.1
Busath, D.D.2
-
13
-
-
14044278010
-
New model for crystalline polyglutamine assemblies and their connection with amyloid fibrils
-
P. Sikorski, and E. Atkins New model for crystalline polyglutamine assemblies and their connection with amyloid fibrils Biomacromolecules 6 2005 425 432
-
(2005)
Biomacromolecules
, vol.6
, pp. 425-432
-
-
Sikorski, P.1
Atkins, E.2
-
14
-
-
26444575834
-
Polyglutamine homopolymers having 8-45 residues form slablike β-crystallite assemblies
-
D. Sharma, L.M. Shinchuk, H. Inouye, R. Wetzel, and D.A. Kirschner Polyglutamine homopolymers having 8-45 residues form slablike β-crystallite assemblies Proteins: Struct. Funct. Genet. 61 2005 398 411
-
(2005)
Proteins: Struct. Funct. Genet.
, vol.61
, pp. 398-411
-
-
Sharma, D.1
Shinchuk, L.M.2
Inouye, H.3
Wetzel, R.4
Kirschner, D.A.5
-
15
-
-
0037195098
-
Stabilities and conformations of Alzheimer's β-amyloid peptide oligomers (Aβ16-22, Aβ16-35, Aβ10-35)
-
B. Ma, and R. Nussinov Stabilities and conformations of Alzheimer's β-amyloid peptide oligomers (Aβ16-22, Aβ16-35, Aβ10-35) Proc. Natl Acad. Sci. USA 99 2002 14126 14131
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 14126-14131
-
-
Ma, B.1
Nussinov, R.2
-
16
-
-
0037168655
-
A structural model for Alzheimer's β-amyloid fibrils based on experimental constrains from solid state NMR
-
A.T. Petkova, Y. Ishii, J.J. Balbach, O.N. Antzutkin, R.D. Leapman, F. Delaglio, and R. Tycko A structural model for Alzheimer's β-amyloid fibrils based on experimental constrains from solid state NMR Proc. Natl Acad. Sci. USA 99 2002 16742 16747
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 16742-16747
-
-
Petkova, A.T.1
Ishii, Y.2
Balbach, J.J.3
Antzutkin, O.N.4
Leapman, R.D.5
Delaglio, F.6
Tycko, R.7
-
17
-
-
0029764093
-
Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors
-
S. Steinbacher, U. Baxa, S. Miller, A. Weintraub, R. Seckler, and R. Huber Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors Proc. Natl Acad. Sci. USA 93 1996 10584 10588
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 10584-10588
-
-
Steinbacher, S.1
Baxa, U.2
Miller, S.3
Weintraub, A.4
Seckler, R.5
Huber, R.6
-
18
-
-
0032539573
-
Amyloid fibrils may be assembled from β-helical protofibrils
-
N.D. Lazo, and D.T. Downing Amyloid fibrils may be assembled from β-helical protofibrils Biochemistry 37 1998 1731 1735
-
(1998)
Biochemistry
, vol.37
, pp. 1731-1735
-
-
Lazo, N.D.1
Downing, D.T.2
-
19
-
-
0035543109
-
The architecture of parallel β-helices and related folds
-
J. Jenkinsa, and R. Pickersgill The architecture of parallel β-helices and related folds Prog. Biophys. Mol. Biol. 77 2001 111 175
-
(2001)
Prog. Biophys. Mol. Biol.
, vol.77
, pp. 111-175
-
-
Jenkinsa, J.1
Pickersgill, R.2
-
20
-
-
0036052739
-
Ideas of order for amyloid fibril structure
-
R. Wetzel Ideas of order for amyloid fibril structure Structure 10 2002 1031 1036
-
(2002)
Structure
, vol.10
, pp. 1031-1036
-
-
Wetzel, R.1
-
21
-
-
0037133587
-
Structural studies of the scrapie prion protein by electron crystallography
-
H. Wille, M.D. Michelitsch, V. Guenebaut, S. Supattapone, A. Serban, and F.E. Cohen Structural studies of the scrapie prion protein by electron crystallography Proc. Natl Acad. Sci. USA 99 2002 3563 3568
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 3563-3568
-
-
Wille, H.1
Michelitsch, M.D.2
Guenebaut, V.3
Supattapone, S.4
Serban, A.5
Cohen, F.E.6
-
23
-
-
0028841116
-
Stereochemical analysis of the antigenic tip of the V3 loop peptide of HIV-1 gp120
-
K. Gunasekaran, C. Ramakrishnan, and P. Balaram Stereochemical analysis of the antigenic tip of the V3 loop peptide of HIV-1 gp120 Int. J. Pept. Protein Res. 46 1995 359 365
-
(1995)
Int. J. Pept. Protein Res.
, vol.46
, pp. 359-365
-
-
Gunasekaran, K.1
Ramakrishnan, C.2
Balaram, P.3
-
24
-
-
0035874146
-
Analysis of a data set of paired uncomplexed protein structures: New metrics for side-chain flexibility and model evaluation
-
S. Zhao, D.S. Goodsell, and A.J. Olson Analysis of a data set of paired uncomplexed protein structures: new metrics for side-chain flexibility and model evaluation Proteins: Struct. Funct. Genet. 43 2001 271 279
-
(2001)
Proteins: Struct. Funct. Genet.
, vol.43
, pp. 271-279
-
-
Zhao, S.1
Goodsell, D.S.2
Olson, A.J.3
-
25
-
-
0028120050
-
Comparison of two crystal structures of TGF-β2: The accuracy of refined protein structures
-
S. Daopin, D.R. Davies, M.P. Schlunegger, and M.G. Grütter Comparison of two crystal structures of TGF-β2: the accuracy of refined protein structures Acta Crystallog. sect. D 50 1994 85 92
-
(1994)
Acta Crystallog. Sect. D
, vol.50
, pp. 85-92
-
-
Daopin, S.1
Davies, D.R.2
Schlunegger, M.P.3
Grütter, M.G.4
-
27
-
-
0032545165
-
Conformational interconversions in peptide β-turns: Analysis of turns in proteins and computational estimates of barriers
-
K. Gunasekaran, L. Gomathi, C. Ramakrishnan, J. Chandrasekhar, and P. Balaram Conformational interconversions in peptide β-turns: analysis of turns in proteins and computational estimates of barriers J. Mol. Biol. 284 1998 1505 1516
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 1505-1516
-
-
Gunasekaran, K.1
Gomathi, L.2
Ramakrishnan, C.3
Chandrasekhar, J.4
Balaram, P.5
-
28
-
-
0037168642
-
Mutational analysis of the structural organization of polyglutamine aggregates
-
A.K. Thakur, and R. Wetzel Mutational analysis of the structural organization of polyglutamine aggregates Proc. Natl Acad. Sci. USA 99 2002 17014 17019
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 17014-17019
-
-
Thakur, A.K.1
Wetzel, R.2
-
29
-
-
0037015081
-
Huntington's disease age-of-onset linked to polyglutamine aggregation nucleation
-
S. Chen, F.A. Ferrone, and R. Wetzel Huntington's disease age-of-onset linked to polyglutamine aggregation nucleation Proc. Natl Acad. Sci. USA 99 2002 11884 11889
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 11884-11889
-
-
Chen, S.1
Ferrone, F.A.2
Wetzel, R.3
-
30
-
-
27344435254
-
Polyglutamine aggregation nucleation: Thermodynamics of a highly unfavorable protein folding reaction
-
A.M. Bhattacharyya, A.K. Thakur, and R. Wetzel Polyglutamine aggregation nucleation: thermodynamics of a highly unfavorable protein folding reaction Proc. Natl Acad. Sci. USA 102 2005 15400 15405
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 15400-15405
-
-
Bhattacharyya, A.M.1
Thakur, A.K.2
Wetzel, R.3
-
31
-
-
20444440728
-
Structure of the cross-β spine of amyloid-like fibrils
-
R. Nelson, M.R. Sawaya, M. Balbirnie, A. Madsen, C. Riekel, R. Grothe, and D. Eisenberg Structure of the cross-β spine of amyloid-like fibrils Nature 435 2005 773 778
-
(2005)
Nature
, vol.435
, pp. 773-778
-
-
Nelson, R.1
Sawaya, M.R.2
Balbirnie, M.3
Madsen, A.4
Riekel, C.5
Grothe, R.6
Eisenberg, D.7
-
32
-
-
2542542833
-
A model for Ure2p prion filaments and other amyloids: The parallel superpleated-structure
-
V. Andrey, A.V. Kajava, U. Baxa, R.B. Wickner, and A.C. Steven A model for Ure2p prion filaments and other amyloids: the parallel superpleated- structure Proc. Natl Acad. Sci. USA 101 2004 7885 7890
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 7885-7890
-
-
Andrey, V.1
Kajava, A.V.2
Baxa, U.3
Wickner, R.B.4
Steven, A.C.5
-
33
-
-
84962473612
-
Binding in complex ionic systems: Anticooperative effects in systems stabilized by electrostatic interactions
-
C. Aleman, and D. Zanuy Binding in complex ionic systems: anticooperative effects in systems stabilized by electrostatic interactions Chem. Phys. Letters 343 2001 390 396
-
(2001)
Chem. Phys. Letters
, vol.343
, pp. 390-396
-
-
Aleman, C.1
Zanuy, D.2
-
34
-
-
0037339326
-
Short peptide amyloid organization: Stabilities and conformations of the islet amyloid peptide NFGAIL
-
D. Zanuy, B. Ma, and R. Nussinov Short peptide amyloid organization: stabilities and conformations of the islet amyloid peptide NFGAIL Biophys. J. 84 2003 1 11
-
(2003)
Biophys. J.
, vol.84
, pp. 1-11
-
-
Zanuy, D.1
Ma, B.2
Nussinov, R.3
-
35
-
-
1542686314
-
Peptide sequence and amyloid formation: Molecular simulations and experimental study of a human islet amyloid polypeptide fragment and its analogs
-
D. Zanuy, Y. Porat, E. Gazit, and R. Nussinov Peptide sequence and amyloid formation: molecular simulations and experimental study of a human islet amyloid polypeptide fragment and its analogs Structure 12 2004 439 455
-
(2004)
Structure
, vol.12
, pp. 439-455
-
-
Zanuy, D.1
Porat, Y.2
Gazit, E.3
Nussinov, R.4
-
36
-
-
84986512474
-
CHARMM: A program for macromolecular energy minimization and dynamics calculations
-
R.B. Brooks, R.E. Bruccoleri, B.D. Olafson, D.J. Sate, S. Swaminathan, and M. Karplus CHARMM: a program for macromolecular energy minimization and dynamics calculations J. Comput. Chem. 4 1983 187 217
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, R.B.1
Bruccoleri, R.E.2
Olafson, B.D.3
Sate, D.J.4
Swaminathan, S.5
Karplus, M.6
-
37
-
-
0041784950
-
All-hydrogen empirical potential for molecular modeling and dynamics studies of proteins using the CHARMM22 force field
-
J.A.D. MacKerell, D. Bashford, M. Bellott, R.L. Dunbrack Jr, J. Evanseck, and M.J. Field All-hydrogen empirical potential for molecular modeling and dynamics studies of proteins using the CHARMM22 force field J. Phys. Chem. B 102 1998 3586 3616
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586-3616
-
-
MacKerell, J.A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack Jr., R.L.4
Evanseck, J.5
Field, M.J.6
-
38
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
W.L. Jorgensen, J. Chandrasekhar, J.D. Madura, R.W. Impey, and M.L. Klein Comparison of simple potential functions for simulating liquid water J. Chem. Phys. 79 1982 926 935
-
(1982)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
39
-
-
0033520751
-
Folding free energy surface of three-stranded β-sheet protein
-
B.D. Bursulaya, and C.L. Brooks III Folding free energy surface of three-stranded β-sheet protein J. Am. Chem. Soc. 121 1999 9946 9951
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 9946-9951
-
-
Bursulaya, B.D.1
Brooks III, C.L.2
-
40
-
-
0000036869
-
Simulation of activation free energies in molecular systems
-
E. Neria, S. Fischer, and M. Karplus Simulation of activation free energies in molecular systems J. Chem. Phys. 105 1996 1902 1921
-
(1996)
J. Chem. Phys.
, vol.105
, pp. 1902-1921
-
-
Neria, E.1
Fischer, S.2
Karplus, M.3
-
42
-
-
33646940952
-
Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
J.P. Ryckaert, G. Ciccoti, and H.J.C. Berendsen Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes J. Comput. Phys. 23 1977 327 341
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccoti, G.2
Berendsen, H.J.C.3
|