메뉴 건너뛰기




Volumn 6, Issue , 2006, Pages

Stable evolutionary signal in a Yeast protein interaction network

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; EUKARYOTE; GENETIC CONSERVATION; LABORATORY DIAGNOSIS; NONHUMAN; PLASMODIUM FALCIPARUM; PROTEIN EXPRESSION; PROTEIN INTERACTION; SACCHAROMYCES CEREVISIAE;

EID: 33644931696     PISSN: 14712148     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-6-8     Document Type: Article
Times cited : (45)

References (43)
  • 3
    • 0033974688 scopus 로고    scopus 로고
    • Towards a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins
    • Ito T, Tashiro K, Muta S, Ozawa R, Chiba T, Nishizawa M, Yamamoto K, Kuhara S, Sakaki Y: Towards a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins. Proc Nat Acad Sci USA 2000, 97(3):1143-1147.
    • (2000) Proc Nat Acad Sci USA , vol.97 , Issue.3 , pp. 1143-1147
    • Ito, T.1    Tashiro, K.2    Muta, S.3    Ozawa, R.4    Chiba, T.5    Nishizawa, M.6    Yamamoto, K.7    Kuhara, S.8    Sakaki, Y.9
  • 4
    • 0033669189 scopus 로고    scopus 로고
    • A network of protein-protein interactions in yeast
    • Schwikowski B, Uetz P, Fields S: A network of protein-protein interactions in yeast. Nature Biotechn 2000, 18:1257-1261.
    • (2000) Nature Biotechn , vol.18 , pp. 1257-1261
    • Schwikowski, B.1    Uetz, P.2    Fields, S.3
  • 10
    • 0742305866 scopus 로고    scopus 로고
    • Network Biology: Understanding the Cell's Functional Organization
    • Barabaśi A, Oltvai Z: Network Biology: Understanding the Cell's Functional Organization. Nature Rev Gen 2004:101-113.
    • (2004) Nature Rev Gen , pp. 101-113
    • Barabaśi, A.1    Oltvai, Z.2
  • 11
    • 0038483826 scopus 로고    scopus 로고
    • Emergence of Scaling in Random Networks
    • Barabási A, Albert R: Emergence of Scaling in Random Networks. Science 1999, 286:509-512.
    • (1999) Science , vol.286 , pp. 509-512
    • Barabási, A.1    Albert, R.2
  • 12
    • 0036013593 scopus 로고    scopus 로고
    • Statistical mechanics of complex networks
    • Albert R, Barabási AL: Statistical mechanics of complex networks. Rev Mod Phys 2002, 74:47.
    • (2002) Rev Mod Phys , vol.74 , pp. 47
    • Albert, R.1    Barabási, A.L.2
  • 13
    • 0035799707 scopus 로고    scopus 로고
    • Lethality and centrality in protein networks
    • Jeong H, Mason S, Barabási AL, Oltvai Z: Lethality and centrality in protein networks. Nature 2001, 411:41-42.
    • (2001) Nature , vol.411 , pp. 41-42
    • Jeong, H.1    Mason, S.2    Barabási, A.L.3    Oltvai, Z.4
  • 15
    • 0037417817 scopus 로고    scopus 로고
    • Modular organisation of cellular networks
    • Rives A, Galitski T: Modular organisation of cellular networks. Proc Natl Acad Sci USA 2003, 100:1128-1133.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 1128-1133
    • Rives, A.1    Galitski, T.2
  • 16
    • 0142059836 scopus 로고    scopus 로고
    • Protein complexes and functional modules in molecular networks
    • Spirin V, Mirny L: Protein complexes and functional modules in molecular networks. Proc Natl Acad Sci USA 2003, 100:12123-12128.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 12123-12128
    • Spirin, V.1    Mirny, L.2
  • 17
    • 13844310836 scopus 로고    scopus 로고
    • Peeling the Yeast Interaction Network
    • Wuchty S, Almaas E: Peeling the Yeast Interaction Network. Proteomics 2005, 5:444-449.
    • (2005) Proteomics , vol.5 , pp. 444-449
    • Wuchty, S.1    Almaas, E.2
  • 18
    • 0037197886 scopus 로고    scopus 로고
    • The identification of functional modules from genomic association of genes
    • Snel B, Bork P, Huynen M: The identification of functional modules from genomic association of genes. Proc Natl Acad Sci USA 2002, 99:5890-5895.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 5890-5895
    • Snel, B.1    Bork, P.2    Huynen, M.3
  • 19
    • 0036916852 scopus 로고    scopus 로고
    • Interaction and Domain Networks of Yeast
    • Wuchty S: Interaction and Domain Networks of Yeast. Proteomics 2002, 2:1715-1723.
    • (2002) Proteomics , vol.2 , pp. 1715-1723
    • Wuchty, S.1
  • 20
    • 3543099834 scopus 로고    scopus 로고
    • Topology and Evolution in Yeast Interaction Networks
    • Wuchty S: Topology and Evolution in Yeast Interaction Networks. Genome Res 2004, 14:1310-1314.
    • (2004) Genome Res , vol.14 , pp. 1310-1314
    • Wuchty, S.1
  • 22
    • 0242284421 scopus 로고    scopus 로고
    • A simple dependence between protein evolution rate and the number of protein-protein interactions
    • Fraser H, Wall D, Hirsh A: A simple dependence between protein evolution rate and the number of protein-protein interactions. BMC Evol Biol 2003, 3(11):.
    • (2003) BMC Evol Biol , vol.3 , Issue.11
    • Fraser, H.1    Wall, D.2    Hirsh, A.3
  • 23
    • 0842291785 scopus 로고    scopus 로고
    • No simple dependence between protein evolution rate and the number of protein-protein interactions: Only the most prolific interactors tend to evolve slowly
    • Jordan I, Wolf Y, Koonin E: No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly. BMC Evol Biol 2003, 3:.
    • (2003) BMC Evol Biol , vol.3
    • Jordan, I.1    Wolf, Y.2    Koonin, E.3
  • 24
    • 0842291785 scopus 로고    scopus 로고
    • Correction: No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly
    • Jordan I, Wolf Y, Koonin E: Correction: No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly. BMC Evol Biol 2003, 3(5):.
    • (2003) BMC Evol Biol , vol.3 , Issue.5
    • Jordan, I.1    Wolf, Y.2    Koonin, E.3
  • 25
    • 0034687371 scopus 로고    scopus 로고
    • The evolution of linked genes evolve at similar rates
    • Williams E, Hurst L: The evolution of linked genes evolve at similar rates. Nature 2000, 407:900-902.
    • (2000) Nature , vol.407 , pp. 900-902
    • Williams, E.1    Hurst, L.2
  • 26
    • 0141484611 scopus 로고    scopus 로고
    • Evolutionary conservation of motif constituents within the yeast protein interaction network
    • Wuchty S, Oltvai Z, Barabási AL: Evolutionary conservation of motif constituents within the yeast protein interaction network. Nature Genetics 2003, 35:176-179.
    • (2003) Nature Genetics , vol.35 , pp. 176-179
    • Wuchty, S.1    Oltvai, Z.2    Barabási, A.L.3
  • 27
    • 0141730411 scopus 로고    scopus 로고
    • Evolution thinks modular
    • Vespignani A: Evolution thinks modular. Nature Gen 2003, 35:118-119.
    • (2003) Nature Gen , vol.35 , pp. 118-119
    • Vespignani, A.1
  • 29
    • 0035733690 scopus 로고    scopus 로고
    • Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae
    • Ge H, Liu Z, Church G, Vidal M: Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae. Nature Genetics 2001, 29:482-486.
    • (2001) Nature Genetics , vol.29 , pp. 482-486
    • Ge, H.1    Liu, Z.2    Church, G.3    Vidal, M.4
  • 32
    • 14844311241 scopus 로고    scopus 로고
    • Interactome modelling
    • Vidal M: Interactome modelling. FEBS Lett 2005, 579:1834-1838.
    • (2005) FEBS Lett , vol.579 , pp. 1834-1838
    • Vidal, M.1
  • 35
  • 36
    • 0036088133 scopus 로고    scopus 로고
    • DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
    • Xenarios I, Salwinski L, Duan X, Higney P, Kim SM, Eisenberg D: DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions. Nucl Acids Res 2002, 30:303-305.
    • (2002) Nucl Acids Res , vol.30 , pp. 303-305
    • Xenarios, I.1    Salwinski, L.2    Duan, X.3    Higney, P.4    Kim, S.M.5    Eisenberg, D.6
  • 37
    • 0035861990 scopus 로고    scopus 로고
    • Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
    • Remm M, Storm C, Sonnhammer E: Automatic clustering of orthologs and in-paralogs from pairwise species comparisons. J Mol Biol 2001, 314:1041-1052.
    • (2001) J Mol Biol , vol.314 , pp. 1041-1052
    • Remm, M.1    Storm, C.2    Sonnhammer, E.3
  • 38
    • 0037447257 scopus 로고    scopus 로고
    • Assessing experimentally derived interactions in a small world
    • Goldberg D, Roth F: Assessing experimentally derived interactions in a small world. Proc Natl Acad Sci USA 2003, 100:4372-4376.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 4372-4376
    • Goldberg, D.1    Roth, F.2
  • 39
    • 4243071596 scopus 로고    scopus 로고
    • The Transcriptome of the Intraerythrocytic Developmental Cycle of Plasmodium falciparum
    • Bozdech Z, Llinas M, Pulliam B, Wong E, Zhu J, DeRisi J: The Transcriptome of the Intraerythrocytic Developmental Cycle of Plasmodium falciparum. PLoS Biology 2003, 1:1-16.
    • (2003) PLoS Biology , vol.1 , pp. 1-16
    • Bozdech, Z.1    Llinas, M.2    Pulliam, B.3    Wong, E.4    Zhu, J.5    Derisi, J.6
  • 40
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • Eisen M, Spellman P, Brown P, Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Nat Acad Sci 1998, 95:14863-14868.
    • (1998) Proc Nat Acad Sci , vol.95 , pp. 14863-14868
    • Eisen, M.1    Spellman, P.2    Brown, P.3    Botstein, D.4
  • 41
    • 0034721164 scopus 로고    scopus 로고
    • Error and attack tolerance of complex networks
    • Albert R, Jeong H, Barabási A: Error and attack tolerance of complex networks. Nature 2000, 406:378-382.
    • (2000) Nature , vol.406 , pp. 378-382
    • Albert, R.1    Jeong, H.2    Barabási, A.3
  • 42
    • 13444256478 scopus 로고    scopus 로고
    • Inparanoid: A comprehensive database of eukaryotic orthologs
    • O'Brien K, Remm M, Sonnhammer E: Inparanoid: a comprehensive database of eukaryotic orthologs. Nucl Acids Res 2005, 33:D476-D480.
    • (2005) Nucl Acids Res , vol.33
    • O'Brien, K.1    Remm, M.2    Sonnhammer, E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.