A simple dependence between protein evolution rate and the number of protein-protein interactions

BMC Evolutionary Biology

Volumn 3, Issue , 2003, Pages

  Fraser, Hunter B ^a   Wall, Dennis P ^b   Hirsh, Aaron E ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b STANFORD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CANDIDA; CANDIDA ALBICANS; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; SCHIZOSACCHAROMYCES; SCHIZOSACCHAROMYCES POMBE;

FUNGAL PROTEIN;

ARTICLE; CANDIDA ALBICANS; COMPARATIVE STUDY; GENETICS; GENOME; METABOLISM; MOLECULAR EVOLUTION; PROTEIN BINDING; SACCHAROMYCES CEREVISIAE; SCHIZOSACCHAROMYCES; YEAST;

CANDIDA ALBICANS; EVOLUTION, MOLECULAR; FUNGAL PROTEINS; GENOME, FUNGAL; PROTEIN BINDING; SACCHAROMYCES CEREVISIAE; SCHIZOSACCHAROMYCES; YEASTS;

EID: 0242284421     PISSN: 14712148     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2148-3-11     Document Type: Article

References (14)

1. Hirsh AE and Fraser HB Protein dispensability and rate of evolution Nature 2001, 411:1046-1049
2. Pal C, Papp B and Hurst LD Highly expressed genes in yeast evolve slowly Genetics 2001, 158:927-931
3. Fraser HB, Hirsh AE, Steinmetz LM, Scharfe C and Feldman MW Evolutionary rate in the protein interaction network Science 2002, 296:750-752
4. Jordan IK, Wolf YI and Koonin EV No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly BMC Evolutionary Biology 2003, 3:1
5. Mewes HW, Frishman D, Guldener U, Mannhaupt G, Mayer K, Mokrejs M, Morgenstern B, Munsterkotter M, Rudd S and Weil B MIPS: a database for genomes and protein sequences Nucleic Acids Res 2002, 30:31-34
6. Uetz P, Giot L, Cagney G, Mansfield TA, Judson RS, Knight JR, Lockshon D, Narayan V, Srinivasan M and Pochart P A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae Nature 2000, 403:623-627
7. Koski LB and Golding GB The closest BLAST hit is often not the nearest neighbor Journal of Molecular Evolution 2001, 52:540-542
8. Wall DP, Fraser HB and Hirsh AE An improved method for detecting putative orthologs Bioinformatics 2003,
9. Ito T, Chiba T, Ozawa R, Yoshida M, Hattori M and Sakaki Y A comprehensive two-hybrid analysis to explore the yeast protein interactome Proc Natl Acad Sci USA 2001, 98:4569-4574
10. Gavin AC, Bosche M, Krause R, Grandi P, Marzioch M, Bauer A, Schultz J, Rick JM, Michon AM and Cruciat CM Functional organization of the yeast proteome by systematic analysis of protein complexes Nature 2002, 415:141-147
11. Ho Y, Gruhler A, Heilbut A, Bader GD, Moore L, Adams SL, Millar A, Taylor P, Bennett K and Boutilier K Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry Nature 2002, 415:180-183
12. Jeong H, Mason SP, Barabasi AL and Oltvai ZN Lethality and centrality in protein networks Nature 2001, 411:41-42
13. Gibbons JD Nonparametric Measures of Association Newbury Park, UK: Sage 1993,
14. Rain JC, Selig L, De Reuse H, Battaglia V, Reverdy C, Simon S, Lenzen G, Petel F, Wojcik J and Schachter V The protein-protein interaction map of Helicobacter pylori Nature 2001, 409:211-215