-
1
-
-
0642345085
-
Channel-tunnels: Outer membrane components of type I secretion systems and multidrug efflux pumps of Gram-negative bacteria
-
Andersen, C. (2003) Channel-tunnels: outer membrane components of type I secretion systems and multidrug efflux pumps of Gram-negative bacteria. Rev Physiol Biochem Pharmacol 147: 122-165.
-
(2003)
Rev Physiol Biochem Pharmacol
, vol.147
, pp. 122-165
-
-
Andersen, C.1
-
2
-
-
0034304901
-
Chunnel vision. Export and efflux through bacterial channel-tunnels
-
Andersen, C., Hughes, C., and Koronakis, V. (2000) Chunnel vision. Export and efflux through bacterial channel-tunnels. EMBO Rep 1: 313-318.
-
(2000)
EMBO Rep
, vol.1
, pp. 313-318
-
-
Andersen, C.1
Hughes, C.2
Koronakis, V.3
-
3
-
-
0035909824
-
Dominant thermodynamic role of the third independent receptor binding site in the receptor-associated protein RAP
-
Andersen, O.M., Schwarz, F.P., Eisenstein, E., Jacobsen, C., Moestrup, S.K., Etzerodt, M., and Thogersen, H.C. (2001) Dominant thermodynamic role of the third independent receptor binding site in the receptor-associated protein RAP. Biochemistry 40: 15408-15417.
-
(2001)
Biochemistry
, vol.40
, pp. 15408-15417
-
-
Andersen, O.M.1
Schwarz, F.P.2
Eisenstein, E.3
Jacobsen, C.4
Moestrup, S.K.5
Etzerodt, M.6
Thogersen, H.C.7
-
4
-
-
0037143615
-
Transition to the open state of the TolC periplasmic tunnel entrance
-
Andersen, C., Koronakis, E., Bokma, E., Eswaran, J., Humphreys, D., Hughes, C., and Koronakis, V. (2002) Transition to the open state of the TolC periplasmic tunnel entrance. Proc Natl Acad Sci USA 99: 11103-11108.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11103-11108
-
-
Andersen, C.1
Koronakis, E.2
Bokma, E.3
Eswaran, J.4
Humphreys, D.5
Hughes, C.6
Koronakis, V.7
-
5
-
-
0031930713
-
Involvement of outer membrane protein TolC, a possible member of the mar-sox regulon, in maintenance and improvement of organic solvent tolerance of Escherichia coli K-12
-
Aono, R., Tsukagoshi, N., and Yamamoto, M. (1998) Involvement of outer membrane protein TolC, a possible member of the mar-sox regulon, in maintenance and improvement of organic solvent tolerance of Escherichia coli K-12. J Bacteriol 180: 938-944.
-
(1998)
J Bacteriol
, vol.180
, pp. 938-944
-
-
Aono, R.1
Tsukagoshi, N.2
Yamamoto, M.3
-
6
-
-
0029646091
-
Structure of the biotinyl domain of acetyl-coenzyme a carboxylase determined by MAD phasing
-
Athappilly, F.K., and Hendrickson, W.A. (1995) Structure of the biotinyl domain of acetyl-coenzyme A carboxylase determined by MAD phasing. Structure 3: 1407-1419.
-
(1995)
Structure
, vol.3
, pp. 1407-1419
-
-
Athappilly, F.K.1
Hendrickson, W.A.2
-
7
-
-
0035955547
-
Substrate-triggered recruitment of the TolC channel-tunnel during type I export of hemolysin by Escherichia coli
-
Balakrishnan, L., Hughes, C., and Koronakis, V. (2001) Substrate-triggered recruitment of the TolC channel-tunnel during type I export of hemolysin by Escherichia coli. J Mol Biol 313:501-510.
-
(2001)
J Mol Biol
, vol.313
, pp. 501-510
-
-
Balakrishnan, L.1
Hughes, C.2
Koronakis, V.3
-
8
-
-
0344405700
-
A specific interaction between the NBD of the ABC-transporter HlyB and a C-terminal fragment of its transport substrate haemolysin A
-
Benabdelhak, H., Kiontke, S., Horn, C., Ernst, R., Blight, M.A., Holland, I.B., and Schmitt, L. (2003) A specific interaction between the NBD of the ABC-transporter HlyB and a C-terminal fragment of its transport substrate haemolysin A. J Mol Biol 327: 1169-1179.
-
(2003)
J Mol Biol
, vol.327
, pp. 1169-1179
-
-
Benabdelhak, H.1
Kiontke, S.2
Horn, C.3
Ernst, R.4
Blight, M.A.5
Holland, I.B.6
Schmitt, L.7
-
9
-
-
0031053675
-
Three-dimensional structure in solution of the N-terminal lipoyl domain of the pyruvate dehydrogenase complex from Azotobacter vinelandii
-
Berg, A., Vervoort, J., and De Kok, A. (1997) Three-dimensional structure in solution of the N-terminal lipoyl domain of the pyruvate dehydrogenase complex from Azotobacter vinelandii. Eur J Biochem 244: 352-360.
-
(1997)
Eur J Biochem
, vol.244
, pp. 352-360
-
-
Berg, A.1
Vervoort, J.2
De Kok, A.3
-
10
-
-
0034967448
-
Vibrio cholerae TolC is required for bile resistance and colonization
-
Bina, J.E., and Mekalanos, J.J. (2001) Vibrio cholerae TolC is required for bile resistance and colonization. Infect Immun 69: 4681-4685.
-
(2001)
Infect Immun
, vol.69
, pp. 4681-4685
-
-
Bina, J.E.1
Mekalanos, J.J.2
-
11
-
-
0038609651
-
Hexameric structure and assembly of the interleukin-6/IL-6 alpha-receptor/gp130 complex
-
Boulanger, M.J., Chow, D.C., Brevnova, E.E., and Garcia, K.C. (2003) Hexameric structure and assembly of the interleukin-6/IL-6 alpha-receptor/gp130 complex. Science 300: 2101-2104.
-
(2003)
Science
, vol.300
, pp. 2101-2104
-
-
Boulanger, M.J.1
Chow, D.C.2
Brevnova, E.E.3
Garcia, K.C.4
-
12
-
-
0035150225
-
Type I secretion and multidrug efflux: Transport through the TolC channel-tunnel
-
Buchanan, S.K. (2001) Type I secretion and multidrug efflux: transport through the TolC channel-tunnel. Trends Biochem Sci 26: 3-6.
-
(2001)
Trends Biochem Sci
, vol.26
, pp. 3-6
-
-
Buchanan, S.K.1
-
13
-
-
0035910272
-
How to untwist an alpha-helix: Structural principles of an alphahelical barrel
-
Calladine, C.R., Sharff, A., and Luisi, B. (2001) How to untwist an alpha-helix: structural principles of an alphahelical barrel. J Mol Biol 305: 603-618.
-
(2001)
J Mol Biol
, vol.305
, pp. 603-618
-
-
Calladine, C.R.1
Sharff, A.2
Luisi, B.3
-
14
-
-
0032850996
-
Thermodynamic analysis of biomolecular interactions
-
Cooper, A. (1999) Thermodynamic analysis of biomolecular interactions. Curr Opin Chem Biol 3: 557-563.
-
(1999)
Curr Opin Chem Biol
, vol.3
, pp. 557-563
-
-
Cooper, A.1
-
15
-
-
0028318241
-
A family of extracytoplasmic proteins that allow transport of large molecules across the outer membranes of gram-negative bacteria
-
Dinh, T., Paulsen, I.T., and Saier, M.H., Jr (1994) A family of extracytoplasmic proteins that allow transport of large molecules across the outer membranes of gram-negative bacteria. J Bacteriol 176: 3825-3831.
-
(1994)
J Bacteriol
, vol.176
, pp. 3825-3831
-
-
Dinh, T.1
Paulsen, I.T.2
Saier Jr., M.H.3
-
16
-
-
0042838181
-
Chimeric analysis of AcrA function reveals the importance of its C-terminal domain in its interaction with the AcrB multidrug efflux pump
-
Elkins, C.A., and Nikaido, H. (2003) Chimeric analysis of AcrA function reveals the importance of its C-terminal domain in its interaction with the AcrB multidrug efflux pump. J Bacteriol 185: 5349-5356.
-
(2003)
J Bacteriol
, vol.185
, pp. 5349-5356
-
-
Elkins, C.A.1
Nikaido, H.2
-
17
-
-
0037459244
-
Locking TolC entrance helices to prevent protein translocation by the bacterial type I export apparatus
-
Eswaran, J., Hughes, C., and Koronakis, V. (2003) Locking TolC entrance helices to prevent protein translocation by the bacterial type I export apparatus. J Mol Biol 327: 309-315.
-
(2003)
J Mol Biol
, vol.327
, pp. 309-315
-
-
Eswaran, J.1
Hughes, C.2
Koronakis, V.3
-
18
-
-
0029963892
-
Direct measurement of the association of a protein with a family of membrane receptors
-
Evans, L.J., Cooper, A., and Lakey, J.H. (1996) Direct measurement of the association of a protein with a family of membrane receptors. J Mol Biol 255: 559-563.
-
(1996)
J Mol Biol
, vol.255
, pp. 559-563
-
-
Evans, L.J.1
Cooper, A.2
Lakey, J.H.3
-
19
-
-
0029796966
-
Evidence that TolC is required for functioning of the Mar/AcrAB efflux pump of Escherichia coli
-
Fralick, J.A. (1996) Evidence that TolC is required for functioning of the Mar/AcrAB efflux pump of Escherichia coli. J Bacteriol 178: 5803-5805.
-
(1996)
J Bacteriol
, vol.178
, pp. 5803-5805
-
-
Fralick, J.A.1
-
20
-
-
0032698874
-
A ABC-ATPases, adaptable energy generators fuelling transmembrane movement of a variety of molecules in organisms from bacteria to humans
-
Holland, I.B., and Blight, M. (1999) A ABC-ATPases, adaptable energy generators fuelling transmembrane movement of a variety of molecules in organisms from bacteria to humans. J Mol Biol 293: 381-399.
-
(1999)
J Mol Biol
, vol.293
, pp. 381-399
-
-
Holland, I.B.1
Blight, M.2
-
21
-
-
0033515434
-
Alignment and structure prediction of divergent protein families: Periplasmic and outer membrane proteins of bacterial efflux pumps
-
Johnson, J.M., and Church, G.M. (1999) Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps. J Mol Biol 287: 695-715.
-
(1999)
J Mol Biol
, vol.287
, pp. 695-715
-
-
Johnson, J.M.1
Church, G.M.2
-
22
-
-
0031014882
-
Structure of TolC, the outer membrane component of the bacterial type I efflux system, derived from two-dimensional crystals
-
Koronakis, V., Li, J., Koronakis, E., and Stauffer, K. (1997) Structure of TolC, the outer membrane component of the bacterial type I efflux system, derived from two-dimensional crystals. Mol Microbiol 23: 617-626.
-
(1997)
Mol Microbiol
, vol.23
, pp. 617-626
-
-
Koronakis, V.1
Li, J.2
Koronakis, E.3
Stauffer, K.4
-
23
-
-
0034702177
-
Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export
-
Koronakis, V., Sharff, A., Koronakis, E., Luisi, B., and Hughes, C. (2000) Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export. Nature 405: 914-919.
-
(2000)
Nature
, vol.405
, pp. 914-919
-
-
Koronakis, V.1
Sharff, A.2
Koronakis, E.3
Luisi, B.4
Hughes, C.5
-
24
-
-
0035424976
-
Channel-tunnels
-
Koronakis, V., Andersen, C., and Hughes, C. (2001) Channel-tunnels. Curr Opin Struct Biol 11: 403-407.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 403-407
-
-
Koronakis, V.1
Andersen, C.2
Hughes, C.3
-
25
-
-
0028926676
-
Genes acrA and acrB encode a stress-induced efflux system of Escherichia coli
-
Ma, D., Cook, D.N., Alberti, M., Pon, N.G., Nikaido, H., and Hearst, J.E. (1995) Genes acrA and acrB encode a stress-induced efflux system of Escherichia coli. Mol Microbiol 16: 45-55.
-
(1995)
Mol Microbiol
, vol.16
, pp. 45-55
-
-
Ma, D.1
Cook, D.N.2
Alberti, M.3
Pon, N.G.4
Nikaido, H.5
Hearst, J.E.6
-
26
-
-
0037057652
-
Crystal structure of bacterial multidrug efflux transporter AcrB
-
Murakami, S., Nakashima, R., Yamashita, E., and Yamaguchi, A. (2002) Crystal structure of bacterial multidrug efflux transporter AcrB. Nature 419: 587-593.
-
(2002)
Nature
, vol.419
, pp. 587-593
-
-
Murakami, S.1
Nakashima, R.2
Yamashita, E.3
Yamaguchi, A.4
-
27
-
-
0041659129
-
Linkage of the efflux-pump expression level with substrate extrusion rate in the MexAB-OprM efflux pump of Pseudomonas aeruginosa
-
Narita, S., Eda, S., Yoshihara, E., and Nakae, T. (2003) Linkage of the efflux-pump expression level with substrate extrusion rate in the MexAB-OprM efflux pump of Pseudomonas aeruginosa. Biochem Biophys Res Commun 308: 922-926.
-
(2003)
Biochem Biophys Res Commun
, vol.308
, pp. 922-926
-
-
Narita, S.1
Eda, S.2
Yoshihara, E.3
Nakae, T.4
-
28
-
-
23444456920
-
Prevention of drug access to bacterial targets: Permeability barriers and active efflux
-
Nikaido, H. (1994) Prevention of drug access to bacterial targets: permeability barriers and active efflux. Science 264: 382-388.
-
(1994)
Science
, vol.264
, pp. 382-388
-
-
Nikaido, H.1
-
29
-
-
0031278034
-
A family of gram-negative bacterial outer membrane factors that function in the export of proteins, carbohydrates, drugs and heavy metals from gram-negative bacteria
-
Paulsen, I.T., Park, J.H., Choi, P.S., and Saier, M.H. (1997) A family of gram-negative bacterial outer membrane factors that function in the export of proteins, carbohydrates, drugs and heavy metals from gram-negative bacteria. FEMS Microbiol Lett 156: 1-8.
-
(1997)
FEMS Microbiol Lett
, vol.156
, pp. 1-8
-
-
Paulsen, I.T.1
Park, J.H.2
Choi, P.S.3
Saier, M.H.4
-
30
-
-
0036794301
-
Purification, crystallization and preliminary diffraction studies of AcrB, an inner-membrane multi-drug efflux protein
-
Pos, K.M., and Diederichs, K. (2002) Purification, crystallization and preliminary diffraction studies of AcrB, an inner-membrane multi-drug efflux protein. Acta Crystallogr D Biol Crystallogr 58: 1865-1867.
-
(2002)
Acta Crystallogr D Biol Crystallogr
, vol.58
, pp. 1865-1867
-
-
Pos, K.M.1
Diederichs, K.2
-
31
-
-
0031799096
-
Discovery of critical Tol A-binding residues in the bactericidal toxin colicin N: A biophysical approach
-
Raggett, E.M., Bainbridge, G., Evans, L.J., Cooper, A., and Lakey, J.H. (1998) Discovery of critical Tol A-binding residues in the bactericidal toxin colicin N: a biophysical approach. Mol Microbiol 28: 1335-1343.
-
(1998)
Mol Microbiol
, vol.28
, pp. 1335-1343
-
-
Raggett, E.M.1
Bainbridge, G.2
Evans, L.J.3
Cooper, A.4
Lakey, J.H.5
-
32
-
-
0029926274
-
Positive selection vectors for allelic exchange
-
Skorupski, K., and Taylor, R.K. (1996) Positive selection vectors for allelic exchange. Gene 169: 47-52.
-
(1996)
Gene
, vol.169
, pp. 47-52
-
-
Skorupski, K.1
Taylor, R.K.2
-
33
-
-
0029051816
-
Salmonella enteritidis has a homologue of TolC that is required for virulence in BALB/ c mice
-
Stone, B.J., and Miller, V.L. (1995) Salmonella enteritidis has a homologue of TolC that is required for virulence in BALB/ c mice. Mol Microbiol 17: 701-712.
-
(1995)
Mol Microbiol
, vol.17
, pp. 701-712
-
-
Stone, B.J.1
Miller, V.L.2
-
34
-
-
0035086501
-
Antibiotic susceptibility profiles of Escherichia coli strains lacking multidrug efflux pump genes
-
Sulavik, M.C., Houseweart, C., Cramer, C., Jiwani, N., Murgolo, N., Greene, J., et al. (2001) Antibiotic susceptibility profiles of Escherichia coli strains lacking multidrug efflux pump genes. Antimicrob Agents Chemother 45: 1126-1136.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, pp. 1126-1136
-
-
Sulavik, M.C.1
Houseweart, C.2
Cramer, C.3
Jiwani, N.4
Murgolo, N.5
Greene, J.6
-
35
-
-
0032538793
-
Substrate-induced assembly of a contiguous channel for protein export from E. coli: Reversible bridging of an inner-membrane translocase to an outer membrane exit pore
-
Thanabalu, T., Koronakis, E., Hughes, C., and Koronakis, V. (1998) Substrate-induced assembly of a contiguous channel for protein export from E. coli: reversible bridging of an inner-membrane translocase to an outer membrane exit pore. EMBO J 17: 6487-6496.
-
(1998)
EMBO J
, vol.17
, pp. 6487-6496
-
-
Thanabalu, T.1
Koronakis, E.2
Hughes, C.3
Koronakis, V.4
-
36
-
-
0033937939
-
Multiple pathways allow protein secretion across the bacterial outer membrane
-
Thanassi, D.G., and Hultgren, S.J. (2000) Multiple pathways allow protein secretion across the bacterial outer membrane. Curr Opin Cell Biol 12: 420-430.
-
(2000)
Curr Opin Cell Biol
, vol.12
, pp. 420-430
-
-
Thanassi, D.G.1
Hultgren, S.J.2
-
37
-
-
0025372570
-
TolC, an Escherichia coli outer membrane protein required for hemolysin secretion
-
Wandersman, C., and Delepelaire, P. (1990) TolC, an Escherichia coli outer membrane protein required for hemolysin secretion. Proc Natl Acad Sci USA 87: 4776-4780.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 4776-4780
-
-
Wandersman, C.1
Delepelaire, P.2
-
38
-
-
0026012975
-
Analysis of the membrane organization of an Escherichia coli protein translocator, HlyB, a member of a large family of prokaryote and eukaryote surface transport proteins
-
Wang, R.C., Seror, S.J., Blight, M., Pratt, J.M., Broome-Smith, J.K., and Holland, I.B. (1991) Analysis of the membrane organization of an Escherichia coli protein translocator, HlyB, a member of a large family of prokaryote and eukaryote surface transport proteins. J Mol Biol 217: 441-454.
-
(1991)
J Mol Biol
, vol.217
, pp. 441-454
-
-
Wang, R.C.1
Seror, S.J.2
Blight, M.3
Pratt, J.M.4
Broome-Smith, J.K.5
Holland, I.B.6
-
39
-
-
0027498262
-
Light scattering and the absolute characterisation of macromolecules
-
Wyatt, P.J. (1993) Light scattering and the absolute characterisation of macromolecules. Anal Chim Acta 272: 1-40.
-
(1993)
Anal Chim Acta
, vol.272
, pp. 1-40
-
-
Wyatt, P.J.1
-
40
-
-
0034255487
-
Thermodynamic characterization of the interaction between TRAF2 and tumor necrosis factor receptor peptides by isothermal titration calorimetry
-
Ye, H., and Wu, H. (2000) Thermodynamic characterization of the interaction between TRAF2 and tumor necrosis factor receptor peptides by isothermal titration calorimetry. Proc Natl Acad Sci USA 97: 8961-8966.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 8961-8966
-
-
Ye, H.1
Wu, H.2
-
41
-
-
0038670226
-
Structural basis of multidrug-binding capacity of the AcrB multidrug efflux pump
-
Yu, E.W., McDermott, G., Zgurskaya, H.I., Nikaido, H., and Koshland, D.E., Jr (2003a) Structural basis of multidrug-binding capacity of the AcrB multidrug efflux pump. Science 300: 976-980.
-
(2003)
Science
, vol.300
, pp. 976-980
-
-
Yu, E.W.1
McDermott, G.2
Zgurskaya, H.I.3
Nikaido, H.4
Koshland Jr., D.E.5
-
42
-
-
0141615783
-
AcrB multidrug efflux pump of Escherichia coli: Composite substrate-binding cavity of exceptional flexibility generates its extremely wide substrate specificity
-
Yu, E.W., Aires, J.R., and Nikaido, H. (2003b) AcrB multidrug efflux pump of Escherichia coli: composite substrate-binding cavity of exceptional flexibility generates its extremely wide substrate specificity. J Bacteriol 185: 5657-5664.
-
(2003)
J Bacteriol
, vol.185
, pp. 5657-5664
-
-
Yu, E.W.1
Aires, J.R.2
Nikaido, H.3
-
43
-
-
0033534373
-
AcrA is a highly asymmetric protein capable of spanning the periplasm
-
Zgurskaya, H.I., and Nikaido, H. (1999) AcrA is a highly asymmetric protein capable of spanning the periplasm. J Mol Biol 285: 409-420.
-
(1999)
J Mol Biol
, vol.285
, pp. 409-420
-
-
Zgurskaya, H.I.1
Nikaido, H.2
-
44
-
-
0033940002
-
Cross-linked complex between oligomeric periplasmic lipoprotein AcrA and the inner-membrane-associated multidrug efflux pump AcrB from Escherichia coli
-
Zgurskaya, H.I., and Nikaido, H. (2000) Cross-linked complex between oligomeric periplasmic lipoprotein AcrA and the inner-membrane-associated multidrug efflux pump AcrB from Escherichia coli. J Bacteriol 182: 4264-4267.
-
(2000)
J Bacteriol
, vol.182
, pp. 4264-4267
-
-
Zgurskaya, H.I.1
Nikaido, H.2
|