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Volumn 2, Issue 4, 2006, Pages 266-270

Comparison of human (and other) genome browsers

Author keywords

Genome annotations; Genome browsers; Genome databases

Indexed keywords

ACCESS TO INFORMATION; BIOINFORMATICS; COMPUTER INTERFACE; EQUIPMENT DESIGN; GENE EXPRESSION; GENE LOCATION; GENE MAPPING; GENE SEQUENCE; GENETIC TRANSCRIPTION; HUMAN; HUMAN GENOME; INFORMATION PROCESSING; INTERMETHOD COMPARISON; NONHUMAN; REVIEW; SPECIES COMPARISON; WEB BROWSER;

EID: 32044449197     PISSN: 14797364     EISSN: 14797364     Source Type: Journal    
DOI: 10.1186/1479-7364-2-4-266     Document Type: Review
Times cited : (14)

References (25)
  • 1
    • 13444304332 scopus 로고    scopus 로고
    • 'The vertebrate genome annotation (VEGA) database'
    • (Database issue)
    • Ashurst, J.L., Chen, C.K., Gilbert, J.G. et al. (2005), 'The vertebrate genome annotation (VEGA) database', Nucleic Acids Res. Vol. 33, pp. D459-D465, (Database issue).
    • (2005) Nucleic Acids Res. , vol.33
    • Ashurst, J.L.1    Chen, C.K.2    Gilbert, J.G.3
  • 2
    • 13444306641 scopus 로고    scopus 로고
    • 'NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins'
    • (Database issue)
    • Pruitt, K.D., Tatusova, T. and Maglott, D.R. (2005), 'NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins', Nucleic Acids Res Vol. 33, pp. D501-D504 (Database issue).
    • (2005) Nucleic Acids Res , vol.33
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 3
    • 7444262496 scopus 로고    scopus 로고
    • 'The status, quality, and expansion of the NIH full-length cDNA project: The Mammalian Gene Collection (MGC)'
    • Gerhard, D.S., Wagner, L., Feingold, E.A. et al. (2004), 'The status, quality, and expansion of the NIH full-length cDNA project: The Mammalian Gene Collection (MGC)', Genome Res. Vol. 14, pp. 2121-2127.
    • (2004) Genome Res. , vol.14 , pp. 2121-2127
    • Gerhard, D.S.1    Wagner, L.2    Feingold, E.A.3
  • 4
    • 2442707676 scopus 로고    scopus 로고
    • 'The Ensembl automatic gene annotation system'
    • Curwen, V., Eyras, E., Andrews, T.D. et al. (2004), 'The Ensembl automatic gene annotation system', Genome Res. Vol. 14, pp. 942-950.
    • (2004) Genome Res. , vol.14 , pp. 942-950
    • Curwen, V.1    Eyras, E.2    Andrews, T.D.3
  • 5
    • 0031586003 scopus 로고    scopus 로고
    • 'Prediction of complete gene structures in human genomic DNA'
    • Burge, C. and Karlin, S. (1997), 'Prediction of complete gene structures in human genomic DNA', J. Mol. Biol. Vol. 268, pp. 78-94.
    • (1997) J. Mol. Biol. , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 6
    • 17444437765 scopus 로고    scopus 로고
    • 'Integrating genomic homology into gene structure prediction'
    • Korf, I., Flicek, P., Duan, D. and Brent, M.R. (2001), 'Integrating genomic homology into gene structure prediction', Bioinformatics Vol. 17(Suppl 1), pp. S140-S148.
    • (2001) Bioinformatics , vol.17 , Issue.SUPPL. 1
    • Korf, I.1    Flicek, P.2    Duan, D.3    Brent, M.R.4
  • 7
    • 18544381909 scopus 로고    scopus 로고
    • 'A high-resolution recombination map of the human genome'
    • Kong, A., Gudbjartsson, D.F., Sainz, J. et al. (2002), 'A high-resolution recombination map of the human genome', Nat. Genet. Vol. 31, pp. 241-247.
    • (2002) Nat. Genet. , vol.31 , pp. 241-247
    • Kong, A.1    Gudbjartsson, D.F.2    Sainz, J.3
  • 8
    • 0032231877 scopus 로고    scopus 로고
    • 'Comprehensive human genetic maps: Individual and sex-specific variation in recombination'
    • Broman, K.W., Murray, J.C., Sheffield, V.C. et al. (1998), 'Comprehensive human genetic maps: Individual and sex-specific variation in recombination', Am. J. Hum. Genet. Vol. 63, pp. 861-869.
    • (1998) Am. J. Hum. Genet. , vol.63 , pp. 861-869
    • Broman, K.W.1    Murray, J.C.2    Sheffield, V.C.3
  • 9
    • 13344259999 scopus 로고    scopus 로고
    • 'A comprehensive genetic map of the human genome based on 5,264 microsatellites'
    • Dib, C., Faure, S., Fizames, C. et al. (1996), 'A comprehensive genetic map of the human genome based on 5,264 microsatellites', Nature Vol, 380, pp. 152-154.
    • (1996) Nature , vol.380 , pp. 152-154
    • Dib, C.1    Faure, S.2    Fizames, C.3
  • 10
    • 0038364021 scopus 로고    scopus 로고
    • 'Integration of the cytogenetic map with the draft human genome sequence'
    • Furey, T.S. and Haussler, D. (2003), 'Integration of the cytogenetic map with the draft human genome sequence', Hum. Mol. Genet. Vol. 12, pp. 1037-1044.
    • (2003) Hum. Mol. Genet. , vol.12 , pp. 1037-1044
    • Furey, T.S.1    Haussler, D.2
  • 11
    • 0036079158 scopus 로고    scopus 로고
    • 'The human genome browser at UCSC'
    • Kent, W.J., Sugnet, C.W., Furey, T.S. et al. (2002), 'The human genome browser at UCSC', Cenome Res. Vol. 12, pp. 996-1006.
    • (2002) Genome Res. , vol.12 , pp. 996-1006
    • Kent, W.J.1    Sugnet, C.W.2    Furey, T.S.3
  • 13
    • 13444293344 scopus 로고    scopus 로고
    • 'Database resources of the National Center for Biotechnology Information'
    • (Database issue)
    • Wheeler, D.L., Barrett, T., Benson, D.A. et al. (2005), 'Database resources of the National Center for Biotechnology Information', Nucleic Acids Res. Vol. 33, pp. D39-D45 (Database issue).
    • (2005) Nucleic Acids Res. , vol.33
    • Wheeler, D.L.1    Barrett, T.2    Benson, D.A.3
  • 14
    • 13444273448 scopus 로고    scopus 로고
    • 'The universal protein resource (UniProt)'
    • (Database issue)
    • Bairoch, A., Apweiler, R., Wu, C.H. et al. (2005), 'The universal protein resource (UniProt)', Nucleic Acids Res. Vol. 33, pp. D154-D159 (Database issue).
    • (2005) Nucleic Acids Res. , vol.33
    • Bairoch, A.1    Apweiler, R.2    Wu, C.H.3
  • 15
    • 13444272087 scopus 로고    scopus 로고
    • 'Entrez Gene: Gene-centered information at NCBI'
    • (Database issue)
    • Maglott, D., Ostell, J., Pruitt, K.D., et al. (2005), 'Entrez Gene: Gene-centered information at NCBI', Nucleic Acids Res. Vol. 33, pp. D54-D58 (Database issue).
    • (2005) Nucleic Acids Res. , vol.33
    • Maglott, D.1    Ostell, J.2    Pruitt, K.D.3
  • 16
    • 13444266370 scopus 로고    scopus 로고
    • 'Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders'
    • (Database issue)
    • Hamosh, A., Scott, A.F., Amberger, J.S. et al. (2005), 'Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders', Nucleic Acids Res. Vol. 33, pp. D514-D517 (Database issue).
    • (2005) Nucleic Acids Res. , vol.33
    • Hamosh, A.1    Scott, A.F.2    Amberger, J.S.3
  • 17
    • 0035173378 scopus 로고    scopus 로고
    • 'dbSNP: The NCBI database of genetic variation'
    • Sherry, S.T., Ward, M.H., Kholodov, M. et al. (2001), 'dbSNP: The NCBI database of genetic variation', Nucleic Acids Res. Vol. 29, pp. 308-311.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 308-311
    • Sherry, S.T.1    Ward, M.H.2    Kholodov, M.3
  • 18
    • 1542537849 scopus 로고    scopus 로고
    • 'Combining phylogenetic and hidden Markov models in biosequence analysis'
    • Siepel, A. and Haussler, D. (2004), 'Combining phylogenetic and hidden Markov models in biosequence analysis', J. Comput. Biol. Vol. 11, pp. 413-428.
    • (2004) J. Comput. Biol. , vol.11 , pp. 413-428
    • Siepel, A.1    Haussler, D.2
  • 19
    • 7444260846 scopus 로고    scopus 로고
    • 'The ENCODE (ENCyclopedia Of DNA Elements) Project'
    • ENCODE Project Consortium
    • ENCODE Project Consortium (2004), 'The ENCODE (ENCyclopedia Of DNA Elements) Project', Science Vol. 306, pp. 636-640.
    • (2004) Science , vol.306 , pp. 636-640
  • 20
    • 79959503826 scopus 로고    scopus 로고
    • 'The International HapMap Project'
    • The International HapMap Consortium
    • The International HapMap Consortium (2003), 'The International HapMap Project', Nature Vol. 426, pp. 789-796.
    • (2003) Nature , vol.426 , pp. 789-796
  • 21
    • 0025183708 scopus 로고
    • 'Basic local alignment search tool'
    • Altschul, S.F., Gish, W., Miller, W. et al. (1990), 'Basic local alignment search tool', J. Mol. Biol. Vol. 215, pp. 403-410.
    • (1990) J. Mol. Biol. , vol.215 , pp. 403-410
    • Altschul, S.F.1    Gish, W.2    Miller, W.3
  • 22
    • 0036226603 scopus 로고    scopus 로고
    • 'BLAT - The BLAST like alignment tool'
    • Kent, W.J. (2002), 'BLAT - The BLAST like alignment tool', Genome Res. Vol. 12, pp. 656-664.
    • (2002) Genome Res. , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 23
    • 0030920610 scopus 로고    scopus 로고
    • 'Sequence mapping by electronic PCR'
    • Schuler, G.D. (1997), 'Sequence mapping by electronic PCR', Genome Res. Vol. 7, pp. 541-550.
    • (1997) Genome Res. , vol.7 , pp. 541-550
    • Schuler, G.D.1
  • 24
    • 24044522270 scopus 로고    scopus 로고
    • 'BioMart and Bioconductor: A powerful link between biological databases and microarray data analysis'
    • Durinck, S., Moreau, Y., Kasprzyk, A. et al. (2005), 'BioMart and Bioconductor: A powerful link between biological databases and microarray data analysis', Bioinformatics Vol. 21, pp. 3439-3440.
    • (2005) Bioinformatics , vol.21 , pp. 3439-3440
    • Durinck, S.1    Moreau, Y.2    Kasprzyk, A.3
  • 25
    • 0347755531 scopus 로고    scopus 로고
    • 'The UCSC Table Browser data retrieval tool'
    • (Database issue)
    • Karolchik, D., Hinrichs, A.S., Furey, T.S. et al. (2004), 'The UCSC Table Browser data retrieval tool', Nucleic Acids Res. Vol. 32, pp. D493-D496 (Database issue).
    • (2004) Nucleic Acids Res. , vol.32
    • Karolchik, D.1    Hinrichs, A.S.2    Furey, T.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.