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Volumn 34, Issue 1, 2006, Pages

A systematic approach to infer biological relevance and biases of gene network structures

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOINFORMATICS; CONTROLLED STUDY; GENE FUNCTION; GENE SEQUENCE; GENETIC ANALYSIS; HIGH THROUGHPUT SCREENING; INTERNET; PRIORITY JOURNAL; PROTEIN INTERACTION; QUANTITATIVE ANALYSIS;

EID: 31644435820     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gnj002     Document Type: Article
Times cited : (15)

References (33)
  • 4
    • 21244464335 scopus 로고    scopus 로고
    • Binding properties and evolution of homodimers in protein-protein interaction networks
    • Ispolatov,I., Yuryev,A., Mazo,I. and Maslov,S. (2005) Binding properties and evolution of homodimers in protein-protein interaction networks. Nucleic Acids Res., 33, 3629-3635.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 3629-3635
    • Ispolatov, I.1    Yuryev, A.2    Mazo, I.3    Maslov, S.4
  • 9
    • 0345305369 scopus 로고    scopus 로고
    • Functional modules by relating protein interaction networks and gene expression
    • Tornow,S. and Mewes,H.W. (2003) Functional modules by relating protein interaction networks and gene expression. Nucleic Acids Res., 31, 6283-6289.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 6283-6289
    • Tornow, S.1    Mewes, H.W.2
  • 10
    • 19444387865 scopus 로고    scopus 로고
    • A mathematical and computational framework for quantitative comparison and integration of large-scale gene expression data
    • Hart,C.E., Sharenbroich,L., Bornstein,B.J., Trout,D., King,B., Mjolsness,E. and Wold,B.J. (2005) A mathematical and computational framework for quantitative comparison and integration of large-scale gene expression data. Nucleic Acids Res., 33, 2580-2594.
    • (2005) Nucleic Acids Res. , vol.33 , pp. 2580-2594
    • Hart, C.E.1    Sharenbroich, L.2    Bornstein, B.J.3    Trout, D.4    King, B.5    Mjolsness, E.6    Wold, B.J.7
  • 11
    • 3042526849 scopus 로고    scopus 로고
    • Calculating the statistical significance of physical clusters of co-regulated genes in the genome: The role of chromatin in domain-wide gene regulation
    • Chang,C.F., Wai,K.M. and Patterton,H.G. (2004) Calculating the statistical significance of physical clusters of co-regulated genes in the genome: The role of chromatin in domain-wide gene regulation. Nucleic Acids Res., 32, 1798-1807.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1798-1807
    • Chang, C.F.1    Wai, K.M.2    Patterton, H.G.3
  • 12
    • 13444283846 scopus 로고    scopus 로고
    • Global protein function annotation through mining genome-scale data in yeast Saccharomyces cerevisiae
    • Chen,Y. and Xu,D. (2004) Global protein function annotation through mining genome-scale data in yeast Saccharomyces cerevisiae. Nucleic Acids Res., 32, 6414-6424.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 6414-6424
    • Chen, Y.1    Xu, D.2
  • 13
    • 23144467417 scopus 로고    scopus 로고
    • Exploiting scale-free information from expression data for cancer classification
    • Antonov,A.V., Tetko,I.V., Kosykh,D., Surmeli,D. and Mewes,H.W. (2005) Exploiting scale-free information from expression data for cancer classification. Comput. Biol. Chem., 29, 288-293.
    • (2005) Comput. Biol. Chem. , vol.29 , pp. 288-293
    • Antonov, A.V.1    Tetko, I.V.2    Kosykh, D.3    Surmeli, D.4    Mewes, H.W.5
  • 14
    • 33846563409 scopus 로고    scopus 로고
    • Why most published research findings are false
    • Ioannidis,J.P. (2005) Why most published research findings are false. PLoS Med., 2, e124.
    • (2005) PLoS Med. , vol.2
    • Ioannidis, J.P.1
  • 18
    • 0030925920 scopus 로고    scopus 로고
    • Pfam: A comprehensive database of protein domain families based on seed alignments
    • Sonnhammer,E.L., Eddy,S.R. and Durbin,R. (1997) Pfam: A comprehensive database of protein domain families based on seed alignments. Proteins, 28, 405-420.
    • (1997) Proteins , vol.28 , pp. 405-420
    • Sonnhammer, E.L.1    Eddy, S.R.2    Durbin, R.3
  • 19
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto encyclopedia of genes and genomes
    • Kanehisa,M. and Goto,S. (2000) KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res., 28, 27-30.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 21
    • 3242880832 scopus 로고    scopus 로고
    • GFINDer: Genome Function Integrated Discoverer through dynamic annotation, statistical analysis, and mining
    • Masseroli,M., Martucci,D. and Pinciroli,F. (2004) GFINDer: Genome Function Integrated Discoverer through dynamic annotation, statistical analysis, and mining. Nucleic Acids Res., 32, W293-W300.
    • (2004) Nucleic Acids Res. , vol.32
    • Masseroli, M.1    Martucci, D.2    Pinciroli, F.3
  • 22
  • 23
    • 1542399989 scopus 로고    scopus 로고
    • FatiGO: A web tool for finding significant associations of Gene Ontology terms with groups of genes
    • Al-Shahrour,F., Diaz-Uriarte,R. and Dopazo,J. (2004) FatiGO: A web tool for finding significant associations of Gene Ontology terms with groups of genes. Bioinformatics, 20, 578-580.
    • (2004) Bioinformatics , vol.20 , pp. 578-580
    • Al-Shahrour, F.1    Diaz-Uriarte, R.2    Dopazo, J.3
  • 25
    • 0037263812 scopus 로고    scopus 로고
    • MAPPFinder: Using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data
    • Doniger,S.W., Salomonis,N., Dahlquist,K.D., Vranizan,K., Lawlor,S.C. and Conklin,B.R. (2003) MAPPFinder: Using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol., 4, R7.
    • (2003) Genome Biol. , vol.4
    • Doniger, S.W.1    Salomonis, N.2    Dahlquist, K.D.3    Vranizan, K.4    Lawlor, S.C.5    Conklin, B.R.6
  • 26
    • 2942550697 scopus 로고    scopus 로고
    • GOTree Machine (GOTM): A web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
    • Zhang,B., Schmoyer,D., Kirov,S. and Snoddy,J. (2004) GOTree Machine (GOTM): A web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies. BMC Bioinformatics, 5, 16.
    • (2004) BMC Bioinformatics , vol.5 , pp. 16
    • Zhang, B.1    Schmoyer, D.2    Kirov, S.3    Snoddy, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.