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Volumn 21, Issue 10, 2005, Pages 2520-2521

MIPS bacterial genomes functional annotation benchmark dataset

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN;

EID: 21144439082     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti380     Document Type: Article
Times cited : (11)

References (10)
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    • Altschul, S.F.1
  • 2
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    • Prediction of Saccharomyces cerevisiae protein functional class from functional domain composition
    • Cai,Y.D. and Doig,A.J. (2004) Prediction of Saccharomyces cerevisiae protein functional class from functional domain composition. Bioinformatics, 20, 1292-1300.
    • (2004) Bioinformatics , vol.20 , pp. 1292-1300
    • Cai, Y.D.1    Doig, A.J.2
  • 3
    • 6944251719 scopus 로고    scopus 로고
    • Predicting gene function in Saccharomyces cerevisiae
    • Clare,A. and King,R.D. (2003) Predicting gene function in Saccharomyces cerevisiae. Bioinformatics, 19, II42-II49.
    • (2003) Bioinformatics , vol.19
    • Clare, A.1    King, R.D.2
  • 4
    • 0036852181 scopus 로고    scopus 로고
    • Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons
    • Mateos,A. et al. (2002) Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons. Genome Res., 12, 1703-1715.
    • (2002) Genome Res. , vol.12 , pp. 1703-1715
    • Mateos, A.1
  • 5
    • 9144242935 scopus 로고    scopus 로고
    • MIPS: Analysis and annotation of proteins from whole genomes
    • Mewes,H.W. et al. (2004) MIPS: analysis and annotation of proteins from whole genomes. Nucleic Acids Res., 32, D41-D44.
    • (2004) Nucleic Acids Res. , vol.32
    • Mewes, H.W.1
  • 6
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    • Assessment of genome-wide protein function classification for Drosophila melanogaster
    • Mi,H. et al. (2003) Assessment of genome-wide protein function classification for Drosophila melanogaster. Genome Res., 13, 2118-2128.
    • (2003) Genome Res. , vol.13 , pp. 2118-2128
    • Mi, H.1
  • 7
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    • InterPro, progress and status in 2005
    • Mulder,N.J. et al. (2005) InterPro, progress and status in 2005. Nucleic Acids Res., 33, D201-D205.
    • (2005) Nucleic Acids Res. , vol.33
    • Mulder, N.J.1
  • 8
    • 0025933503 scopus 로고
    • Expert system for predicting protein localization sites in gram-negative bacteria
    • Nakai,K. and Kanehisa,M. (1991) Expert system for predicting protein localization sites in gram-negative bacteria. Proteins, 11, 95-110.
    • (1991) Proteins , vol.11 , pp. 95-110
    • Nakai, K.1    Kanehisa, M.2
  • 9
    • 0029933671 scopus 로고    scopus 로고
    • Effective protein sequence comparison
    • Pearson,W.R. (1996) Effective protein sequence comparison. Meth. Enzymol., 266, 227-258.
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    • The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes
    • Ruepp,A. et al. (2004) The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes. Nucleic Acids Res., 32, 5539-5545.
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    • Ruepp, A.1


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