메뉴 건너뛰기




Volumn 21, Issue 24, 2005, Pages 4371-4377

Microarray phenotyping in Dictyostelium reveals a regulon of chemotaxis genes

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHEMOTAXIS; CONTROLLED STUDY; DICTYOSTELIUM; DNA MICROARRAY; FUNCTIONAL GENOMICS; GENE CLUSTER; GENE CONTROL; GENE EXPRESSION; GENE FUNCTION; GENE MUTATION; GENETIC CORRELATION; MUTANT; NEUTROPHIL; NONHUMAN; PHENOTYPE; PREDICTION; PRIORITY JOURNAL; PUBLISHING; REGULON; WILD TYPE;

EID: 28944435090     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti726     Document Type: Article
Times cited : (20)

References (32)
  • 1
    • 0033279835 scopus 로고    scopus 로고
    • Integration of signaling networks that regulate Dictyostelium differentiation
    • Aubry,L. and Firtel,R. (1999) Integration of signaling networks that regulate Dictyostelium differentiation. Ann. Rev. Cell Dev. Biol., 15, 469-517.
    • (1999) Ann. Rev. Cell Dev. Biol. , vol.15 , pp. 469-517
    • Aubry, L.1    Firtel, R.2
  • 2
    • 0029059528 scopus 로고
    • Comparative analysis of chemotaxis in Dictyostelium using a radial bioassay method: Protein tyrosine kinase activity is required for chemotaxis to folate but not to cAMP
    • Browning,D.D. et al. (1995) Comparative analysis of chemotaxis in Dictyostelium using a radial bioassay method: Protein tyrosine kinase activity is required for chemotaxis to folate but not to cAMP. Cell Signal, 7, 481-489.
    • (1995) Cell Signal , vol.7 , pp. 481-489
    • Browning, D.D.1
  • 3
    • 26944457753 scopus 로고    scopus 로고
    • Wound healing and inflammation genes revealed by array analysis of 'macrophageless' PU.1 null mice
    • Cooper,L. et al. (2005) Wound healing and inflammation genes revealed by array analysis of 'macrophageless' PU.1 null mice. Genome Biol., 6, R5.
    • (2005) Genome Biol. , vol.6
    • Cooper, L.1
  • 4
    • 0036489046 scopus 로고    scopus 로고
    • Comparison of discrimination methods for the classification of tumors suing gene expression data
    • Dudoit,S. et al. (2002) Comparison of discrimination methods for the classification of tumors suing gene expression data. J. Am. Stat. Assoc., 97, 77-87.
    • (2002) J. Am. Stat. Assoc. , vol.97 , pp. 77-87
    • Dudoit, S.1
  • 5
    • 0037173615 scopus 로고    scopus 로고
    • Functional profiling of the Saccharomyces cerevisiae genome
    • Giaever,G. et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature, 418, 387-391.
    • (2002) Nature , vol.418 , pp. 387-391
    • Giaever, G.1
  • 6
    • 0034616930 scopus 로고    scopus 로고
    • Functional discovery via a compendium of expression profiles
    • Hughes,T.R. et al. (2000) Functional discovery via a compendium of expression profiles. Cell, 102, 109-126.
    • (2000) Cell , vol.102 , pp. 109-126
    • Hughes, T.R.1
  • 7
    • 0035172914 scopus 로고    scopus 로고
    • Expression patterns of cell-type-specific genes in Dictyostelium
    • Iranfar,N. et al. (2001) Expression patterns of cell-type-specific genes in Dictyostelium. Mol. Biol. Cell., 12, 2590-2600.
    • (2001) Mol. Biol. Cell. , vol.12 , pp. 2590-2600
    • Iranfar, N.1
  • 8
    • 0042232109 scopus 로고    scopus 로고
    • Genome-wide expression analyses of gene regulation during early development of Dictyostelium discoideum
    • Iranfar,N. et al. (2003) Genome-wide expression analyses of gene regulation during early development of Dictyostelium discoideum. Eukaryot. Cell, 2, 664-670.
    • (2003) Eukaryot. Cell , vol.2 , pp. 664-670
    • Iranfar, N.1
  • 9
    • 2342593128 scopus 로고    scopus 로고
    • An orderly retreat: Dedifferentiation is a regulated process
    • Katoh,M. et al. (2004) An orderly retreat: Dedifferentiation is a regulated process. Proc. Natl Acad. Sci. USA, 101, 7005-7010.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 7005-7010
    • Katoh, M.1
  • 11
    • 0038642514 scopus 로고    scopus 로고
    • A novel developmental mechanism in Dictyostelium revealed in a screen for communication mutants
    • Kibler,K. et al. (2003a) A novel developmental mechanism in Dictyostelium revealed in a screen for communication mutants. Dev. Biol., 259, 193-208.
    • (2003) Dev. Biol. , vol.259 , pp. 193-208
    • Kibler, K.1
  • 12
    • 0344925819 scopus 로고    scopus 로고
    • A cell-adhesion pathway regulates intercellular communication during Dictyostelium development
    • Kibler,K. et al. (2003b) A cell-adhesion pathway regulates intercellular communication during Dictyostelium development. Dev. Biol., 264, 506-521.
    • (2003) Dev. Biol. , vol.264 , pp. 506-521
    • Kibler, K.1
  • 13
    • 0037567299 scopus 로고    scopus 로고
    • The signal to move: D. discoideum go orienteering
    • Kimmel,A.R. and Parent,C.A. (2003) The signal to move: D. discoideum go orienteering. Science, 300, 1525-1527.
    • (2003) Science , vol.300 , pp. 1525-1527
    • Kimmel, A.R.1    Parent, C.A.2
  • 14
    • 0022815791 scopus 로고
    • Developmental regulation of Dictyostelium discoideum actin gene fusions carried on low-copy and high-copy transformation vectors
    • Knecht,D.A. et al. (1986) Developmental regulation of Dictyostelium discoideum actin gene fusions carried on low-copy and high-copy transformation vectors. Mol. Cell. Biol., 6, 3973-3983.
    • (1986) Mol. Cell. Biol. , vol.6 , pp. 3973-3983
    • Knecht, D.A.1
  • 15
    • 0031712268 scopus 로고    scopus 로고
    • Role of PKA in the timing of developmental events in Dictyostelium cells
    • Loomis,W.F. (1998) Role of PKA in the timing of developmental events in Dictyostelium cells. Microbiol. Mol. Biol. Rev., 62, 684-694.
    • (1998) Microbiol. Mol. Biol. Rev. , vol.62 , pp. 684-694
    • Loomis, W.F.1
  • 16
    • 10744225585 scopus 로고    scopus 로고
    • Changing patterns of gene expression in Dictyostelium prestalk cell subtypes recognized by in situ hybridization with genes from microarray analyses
    • Maeda,M. et al. (2003) Changing patterns of gene expression in Dictyostelium prestalk cell subtypes recognized by in situ hybridization with genes from microarray analyses. Eukaryot. Cell, 2, 627-637.
    • (2003) Eukaryot. Cell , vol.2 , pp. 627-637
    • Maeda, M.1
  • 17
    • 2442526725 scopus 로고    scopus 로고
    • Periodic signaling controlled by an oscillatory circuit that includes protein kinases ERK2 and PKA
    • Maeda,M. et al. (2004) Periodic signaling controlled by an oscillatory circuit that includes protein kinases ERK2 and PKA. Science, 304, 875-878.
    • (2004) Science , vol.304 , pp. 875-878
    • Maeda, M.1
  • 18
    • 0030876641 scopus 로고    scopus 로고
    • Precocious sporulation and developmental lethality in yelA null mutants of Dictyostelium
    • Osherov,N. et al. (1997) Precocious sporulation and developmental lethality in yelA null mutants of Dictyostelium. Dev. Genet., 20, 307-319.
    • (1997) Dev. Genet. , vol.20 , pp. 307-319
    • Osherov, N.1
  • 19
    • 1642328487 scopus 로고    scopus 로고
    • Making all the right moves: Chemotaxis in neutrophils and Dictyostelium
    • Parent,C.A. (2004) Making all the right moves: Chemotaxis in neutrophils and Dictyostelium. Curr. Opin. Cell. Biol., 16, 4-13.
    • (2004) Curr. Opin. Cell. Biol. , vol.16 , pp. 4-13
    • Parent, C.A.1
  • 20
    • 0033617576 scopus 로고    scopus 로고
    • A cell's sense of direction
    • Parent,C.A. and Devreotes,P.N. (1999) A cell's sense of direction. Science, 284, 765-770.
    • (1999) Science , vol.284 , pp. 765-770
    • Parent, C.A.1    Devreotes, P.N.2
  • 21
    • 1242298534 scopus 로고    scopus 로고
    • Chemotaxis: Signalling modules join hands at front and tail
    • Postma,M. et al. (2004) Chemotaxis: Signalling modules join hands at front and tail. EMBO Rep., 5, 35-40.
    • (2004) EMBO Rep. , vol.5 , pp. 35-40
    • Postma, M.1
  • 22
    • 0035998870 scopus 로고    scopus 로고
    • Gene expression patterns in Dictyostelium using microarrays
    • Shaulsky,G. and Loomis,W.F. (2002) Gene expression patterns in Dictyostelium using microarrays. Protist., 153, 93-98.
    • (2002) Protist. , vol.153 , pp. 93-98
    • Shaulsky, G.1    Loomis, W.F.2
  • 23
    • 0141993704 scopus 로고    scopus 로고
    • A gene-coexpression network for global discovery of conserved genetic modules
    • Stuart,J.M. et al. (2003) A gene-coexpression network for global discovery of conserved genetic modules. Science, 302, 249-255.
    • (2003) Science , vol.302 , pp. 249-255
    • Stuart, J.M.1
  • 24
    • 2942592237 scopus 로고    scopus 로고
    • The transcriptional activation program of human neutrophils in skin lesions supports their important role in wound healing
    • Theilgaard-Monch,K. et al. (2004) The transcriptional activation program of human neutrophils in skin lesions supports their important role in wound healing. J. Immunol., 172, 7684-7693.
    • (2004) J. Immunol. , vol.172 , pp. 7684-7693
    • Theilgaard-Monch, K.1
  • 25
    • 1242307459 scopus 로고    scopus 로고
    • A bZIP/bRLZ transcription factor required for DIF signaling in Dictyostelium
    • Thompson,C.R. et al. (2004) A bZIP/bRLZ transcription factor required for DIF signaling in Dictyostelium. Development, 131, 513-523.
    • (2004) Development , vol.131 , pp. 513-523
    • Thompson, C.R.1
  • 26
    • 0036336886 scopus 로고    scopus 로고
    • A transcriptional profile of multicellular development in Dictyostelium discoideum
    • Van Driessche,N. et al. (2002) A transcriptional profile of multicellular development in Dictyostelium discoideum. Development, 129, 1543-1552.
    • (2002) Development , vol.129 , pp. 1543-1552
    • Van Driessche, N.1
  • 27
    • 18144425479 scopus 로고    scopus 로고
    • Epistasis analysis with global transcriptional phenotypes
    • Van Driessche,N. et al. (2005) Epistasis analysis with global transcriptional phenotypes. Nat. Genet., 37, 471-477.
    • (2005) Nat. Genet. , vol.37 , pp. 471-477
    • Van Driessche, N.1
  • 29
    • 0033529707 scopus 로고    scopus 로고
    • Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
    • Winzeler,E.A. et al. (1999) Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science, 285, 901-906.
    • (1999) Science , vol.285 , pp. 901-906
    • Winzeler, E.A.1
  • 30
    • 28444480655 scopus 로고    scopus 로고
    • GOAT: An R tool for analyzing Gene Ontology term enrichment
    • in press
    • Xu,Q. and Shaulsky,G. (2005) GOAT: An R tool for analyzing Gene Ontology term enrichment. Appl. Bioinformatics, in press.
    • (2005) Appl. Bioinformatics
    • Xu, Q.1    Shaulsky, G.2
  • 31
    • 6344291621 scopus 로고    scopus 로고
    • Transcriptional transitions during Dictyostelium spore germination. Eukaryot
    • Xu,Q. et al. (2004) Transcriptional transitions during Dictyostelium spore germination. Eukaryot. Cell., 3, 1101-1110.
    • (2004) Cell. , vol.3 , pp. 1101-1110
    • Xu, Q.1
  • 32
    • 33947219859 scopus 로고    scopus 로고
    • The functional landscape of mouse gene expression
    • Zhang,W. et al. (2004) The functional landscape of mouse gene expression. J.Bol., 3, 21.
    • (2004) J. Biol. , vol.3 , pp. 21
    • Zhang, W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.