메뉴 건너뛰기




Volumn 7, Issue 6, 2005, Pages 543-550

Genomic studies in stem cell systems

Author keywords

Functional genomics; High throughput screen; Microarray; Proteomics; Stem cells; Transcriptome profiling

Indexed keywords

BONE MORPHOGENETIC PROTEIN 4; COMPLEMENTARY DNA; EPIDERMAL GROWTH FACTOR; FIBROBLAST GROWTH FACTOR; FLUORESCENT DYE; MICRORNA; OSTEOGENIC PROTEIN 1; PLATELET DERIVED GROWTH FACTOR; TRANSCRIPTOME; VIRUS VECTOR;

EID: 28844446286     PISSN: 14648431     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (7)

References (47)
  • 1
    • 0042738931 scopus 로고    scopus 로고
    • Umbilical-cord blood transplantation for the treatment of cancer
    • Barker JN, Wagner JE: Umbilical-cord blood transplantation for the treatment of cancer. Nat Rev Cancer (2003) 3(7):526-532.
    • (2003) Nat Rev Cancer , vol.3 , Issue.7 , pp. 526-532
    • Barker, J.N.1    Wagner, J.E.2
  • 4
    • 9244221172 scopus 로고    scopus 로고
    • Tissue repair and stem cell renewal in carcinogenesis
    • Beachy PA, Karhadkar SS, Berman DM: Tissue repair and stem cell renewal in carcinogenesis. Nature (2004) 432(7015):324-31.
    • (2004) Nature , vol.432 , Issue.7015 , pp. 324-331
    • Beachy, P.A.1    Karhadkar, S.S.2    Berman, D.M.3
  • 6
    • 0041560908 scopus 로고    scopus 로고
    • Molecular signature of human embryonic stem cells and its comparison with the mouse
    • Sato N, Sanjuan IM, Heke M, Uchida M, Naef F, Brivanlou AH: Molecular signature of human embryonic stem cells and its comparison with the mouse. Dev Biol (2003) 260(2):404-413.
    • (2003) Dev Biol , vol.260 , Issue.2 , pp. 404-413
    • Sato, N.1    Sanjuan, I.M.2    Heke, M.3    Uchida, M.4    Naef, F.5    Brivanlou, A.H.6
  • 8
    • 1642407667 scopus 로고    scopus 로고
    • Unique gene expression signatures of independently-derived human embryonic stem cell lines
    • Abeyta MJ, Clark AT, Rodriguez RT, Bodnar MS, Pera RA, Firpo MT: Unique gene expression signatures of independently-derived human embryonic stem cell lines. Hum Mol Genet (2004) 13(6):601-608.
    • (2004) Hum Mol Genet , vol.13 , Issue.6 , pp. 601-608
    • Abeyta, M.J.1    Clark, A.T.2    Rodriguez, R.T.3    Bodnar, M.S.4    Pera, R.A.5    Firpo, M.T.6
  • 10
    • 16644383562 scopus 로고    scopus 로고
    • Temporal expression changes during differentiation of neural stem cells derived from mouse embryonic stem cell
    • Ahn JI, Lee KH, Shin DM, Shim JW, Kim CM, Kim H, Lee SH, Lee YS: Temporal expression changes during differentiation of neural stem cells derived from mouse embryonic stem cell. J Cell Biochem (2004) 93(3):563-578.
    • (2004) J Cell Biochem , vol.93 , Issue.3 , pp. 563-578
    • Ahn, J.I.1    Lee, K.H.2    Shin, D.M.3    Shim, J.W.4    Kim, C.M.5    Kim, H.6    Lee, S.H.7    Lee, Y.S.8
  • 11
    • 0141594644 scopus 로고    scopus 로고
    • Genetic and functional differences between multipotent neural and pluripotent embryonic stem cells
    • D'Amour KA, Gage FH: Genetic and functional differences between multipotent neural and pluripotent embryonic stem cells. Proc Natl Acad Sci USA (2003) 100(Suppl 1):11866-11872.
    • (2003) Proc Natl Acad Sci USA , vol.100 , Issue.SUPPL. 1 , pp. 11866-11872
    • D'Amour, K.A.1    Gage, F.H.2
  • 12
    • 16444365757 scopus 로고    scopus 로고
    • Differential gene expression profiling of human umbilical cord blood-derived mesenchymal stem cells by DNA microarray
    • Jeong JA, Hong SH, Gang EJ, Ahn C, Hwang SH, Yang IH, Han H, Kim H: Differential gene expression profiling of human umbilical cord blood-derived mesenchymal stem cells by DNA microarray. Stem Cells (2005) 23(4):584-593.
    • (2005) Stem Cells , vol.23 , Issue.4 , pp. 584-593
    • Jeong, J.A.1    Hong, S.H.2    Gang, E.J.3    Ahn, C.4    Hwang, S.H.5    Yang, I.H.6    Han, H.7    Kim, H.8
  • 15
    • 18744390776 scopus 로고    scopus 로고
    • The age of high-throughput microRNA profiling
    • Esquela-Kerscher A, Slack FJ: The age of high-throughput microRNA profiling. Nat Methods (2004) 1(2):106-107.
    • (2004) Nat Methods , vol.1 , Issue.2 , pp. 106-107
    • Esquela-Kerscher, A.1    Slack, F.J.2
  • 16
    • 13944262052 scopus 로고    scopus 로고
    • A custom microarray platform for analysis of microRNA gene expression
    • Thomson JM, Parker J, Perou CM, Hammond SM: A custom microarray platform for analysis of microRNA gene expression. Nat Methods (2004) 1(1):47-53.
    • (2004) Nat Methods , vol.1 , Issue.1 , pp. 47-53
    • Thomson, J.M.1    Parker, J.2    Perou, C.M.3    Hammond, S.M.4
  • 18
    • 0346250854 scopus 로고    scopus 로고
    • The transcriptome profile of human embryonic stem cells as defined by SAGE
    • Richards M, Tan SP, Tan JH, Chan WK, Bongso A: The transcriptome profile of human embryonic stem cells as defined by SAGE. Stem Cells (2004) 22(1):51-64.
    • (2004) Stem Cells , vol.22 , Issue.1 , pp. 51-64
    • Richards, M.1    Tan, S.P.2    Tan, J.H.3    Chan, W.K.4    Bongso, A.5
  • 23
    • 0030964025 scopus 로고    scopus 로고
    • Gene trapping and functional genomics
    • Evans MJ, Carlton MB, Russ AP: Gene trapping and functional genomics. Trends Genet (1997) 13(9):370-374.
    • (1997) Trends Genet , vol.13 , Issue.9 , pp. 370-374
    • Evans, M.J.1    Carlton, M.B.2    Russ, A.P.3
  • 24
    • 0027419727 scopus 로고
    • An efficient gene-trap method using poly A trap vectors and characterization of gene-trap events
    • Niwa H, Araki K, Kimura S, Taniguchi S, Wakasugi S, Yamamura K: An efficient gene-trap method using poly A trap vectors and characterization of gene-trap events. J Biochem (1993) 113(3):343-349.
    • (1993) J Biochem , vol.113 , Issue.3 , pp. 343-349
    • Niwa, H.1    Araki, K.2    Kimura, S.3    Taniguchi, S.4    Wakasugi, S.5    Yamamura, K.6
  • 25
    • 3042531072 scopus 로고    scopus 로고
    • Mismatch repair genes identified using genetic screens in Blm-deficient embryonic stem cells
    • Guo G, Wang W, Bradley A: Mismatch repair genes identified using genetic screens in Blm-deficient embryonic stem cells. Nature (2004) 429(6994):891-895.
    • (2004) Nature , vol.429 , Issue.6994 , pp. 891-895
    • Guo, G.1    Wang, W.2    Bradley, A.3
  • 27
    • 7644222271 scopus 로고    scopus 로고
    • Inducible gene trapping with drug-selectable markers and Cre/IoxP to identify developmentally regulated genes
    • Chen YT, Liu P, Bradley A: Inducible gene trapping with drug-selectable markers and Cre/IoxP to identify developmentally regulated genes. Mol Cell Biol (2004) 24(22):9930-9941.
    • (2004) Mol Cell Biol , vol.24 , Issue.22 , pp. 9930-9941
    • Chen, Y.T.1    Liu, P.2    Bradley, A.3
  • 28
    • 3242791094 scopus 로고    scopus 로고
    • Gene trap as a tool for genome annotation and analysis of X chromosome inactivation in human embryonic stem cells
    • Dhara SK, Benvenisty N: Gene trap as a tool for genome annotation and analysis of X chromosome inactivation in human embryonic stem cells. Nucleic Acids Res (2004) 32(13):3995-4002.
    • (2004) Nucleic Acids Res , vol.32 , Issue.13 , pp. 3995-4002
    • Dhara, S.K.1    Benvenisty, N.2
  • 29
    • 18244386467 scopus 로고    scopus 로고
    • Quantitative analysis of gene expression in living adult neural stem cells by gene trapping
    • Scheel JR, Ray J, Gage FH, Barlow C: Quantitative analysis of gene expression in living adult neural stem cells by gene trapping. Nat Methods (2005) 2(5):363-370.
    • (2005) Nat Methods , vol.2 , Issue.5 , pp. 363-370
    • Scheel, J.R.1    Ray, J.2    Gage, F.H.3    Barlow, C.4
  • 32
    • 0035942736 scopus 로고    scopus 로고
    • Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
    • Elbashir SM, Harborth J, Lendeckel W, Yalcin A, Weber K, Tuschl T: Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature (2001) 411(6836):494-498.
    • (2001) Nature , vol.411 , Issue.6836 , pp. 494-498
    • Elbashir, S.M.1    Harborth, J.2    Lendeckel, W.3    Yalcin, A.4    Weber, K.5    Tuschl, T.6
  • 36
    • 20044366920 scopus 로고    scopus 로고
    • Cell microarrays; and RNA interference chip away at gene function
    • Wheeler DB, Carpenter AE, Sabatini DM: Cell microarrays; and RNA interference chip away at gene function. Nat Genet (2005) 37(Suppl):S25-S30.
    • (2005) Nat Genet , vol.37 , Issue.SUPPL.
    • Wheeler, D.B.1    Carpenter, A.E.2    Sabatini, D.M.3
  • 37
    • 21844473275 scopus 로고    scopus 로고
    • High-throughput RNAi screening in vitro: From cell lines to primary cells
    • Ovcharenko D, Jarvis R, Hunicke-Smith S, Keinar K, Brown D: High-throughput RNAi screening in vitro: From cell lines to primary cells. RNA (2005) 11(6):985-993.
    • (2005) RNA , vol.11 , Issue.6 , pp. 985-993
    • Ovcharenko, D.1    Jarvis, R.2    Hunicke-Smith, S.3    Keinar, K.4    Brown, D.5
  • 38
    • 4644250693 scopus 로고    scopus 로고
    • Purmorphamine induces osteogenesis by activation of the hedgehog signaling pathway
    • Wu X, Walker J, Zhang J, Ding S, Schultz PG: Purmorphamine induces osteogenesis by activation of the hedgehog signaling pathway. Chem Biol (2004) 11(9):1229-1238.
    • (2004) Chem Biol , vol.11 , Issue.9 , pp. 1229-1238
    • Wu, X.1    Walker, J.2    Zhang, J.3    Ding, S.4    Schultz, P.G.5
  • 39
    • 3042744026 scopus 로고    scopus 로고
    • A role for chemistry in stem cell biology
    • Ding S, Schultz PG: A role for chemistry in stem cell biology. Nat Biotechnol (2004) 22(7):833-840.
    • (2004) Nat Biotechnol , vol.22 , Issue.7 , pp. 833-840
    • Ding, S.1    Schultz, P.G.2
  • 40
    • 10644230916 scopus 로고    scopus 로고
    • Current two-dimensional electrophoresis technology for proteomics
    • Gorg A, Weiss W, Dunn MJ: Current two-dimensional electrophoresis technology for proteomics. Proteomics (2004) 4(12):3665-3685.
    • (2004) Proteomics , vol.4 , Issue.12 , pp. 3665-3685
    • Gorg, A.1    Weiss, W.2    Dunn, M.J.3
  • 41
    • 10644237907 scopus 로고    scopus 로고
    • Two-dimensional gel electrophoresis database of murine R1 embryonic stem cells
    • Elliott ST, Crider DG, Garnham CP, Boheler KR, Van Eyk JE: Two-dimensional gel electrophoresis database of murine R1 embryonic stem cells. Proteomics (2004) 4(12):3813-3832.
    • (2004) Proteomics , vol.4 , Issue.12 , pp. 3813-3832
    • Elliott, S.T.1    Crider, D.G.2    Garnham, C.P.3    Boheler, K.R.4    Van Eyk, J.E.5
  • 43
    • 13844276803 scopus 로고    scopus 로고
    • Prefractionation techniques in proteome analysis: The mining tools of the third millennium
    • Righetti PG, Castagna A, Antonioli P, Boschetti E: Prefractionation techniques in proteome analysis: The mining tools of the third millennium. Electrophoresis (2005) 26(2):297-319.
    • (2005) Electrophoresis , vol.26 , Issue.2 , pp. 297-319
    • Righetti, P.G.1    Castagna, A.2    Antonioli, P.3    Boschetti, E.4
  • 45
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi SP, Rist B, Gerber SA, Turecek F, Gelb MH, Aebersold R: Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat Biotechnol (1999) 17(10):994-999.
    • (1999) Nat Biotechnol , vol.17 , Issue.10 , pp. 994-999
    • Gygi, S.P.1    Rist, B.2    Gerber, S.A.3    Turecek, F.4    Gelb, M.H.5    Aebersold, R.6
  • 46
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong SE, Blagoev B, Kratchmarova I, Kristensen DB, Steen H, Pandey A, Mann M: Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics (2002) 1(5):376-386.
    • (2002) Mol Cell Proteomics , vol.1 , Issue.5 , pp. 376-386
    • Ong, S.E.1    Blagoev, B.2    Kratchmarova, I.3    Kristensen, D.B.4    Steen, H.5    Pandey, A.6    Mann, M.7
  • 47
    • 20344363684 scopus 로고    scopus 로고
    • Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation
    • Kratchmarova I, Blagoev B, Haack-Sorensen M, Kassem M, Mann M: Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation. Science (2005) 308(5727):1472-1477.
    • (2005) Science , vol.308 , Issue.5727 , pp. 1472-1477
    • Kratchmarova, I.1    Blagoev, B.2    Haack-Sorensen, M.3    Kassem, M.4    Mann, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.