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Volumn 25, Issue 23, 2005, Pages 10251-10260

The iStem, a long-range RNA secondary structure element required for efficient exon inclusion in the Drosophila Dscam pre-mRNA

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA PRECURSOR;

EID: 27944461704     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.25.23.10251-10260.2005     Document Type: Article
Times cited : (44)

References (33)
  • 1
    • 0034721644 scopus 로고    scopus 로고
    • Protein diversity from alternative splicing: A challenge for bioinformatics and post-genome biology
    • Black, D. L. 2000. Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology. Cell 103:367-370.
    • (2000) Cell , vol.103 , pp. 367-370
    • Black, D.L.1
  • 2
    • 10044274340 scopus 로고    scopus 로고
    • Influence of RNA secondary structure on the pre-mRNA splicing process
    • Buratti, E., and F. E. Baralle. 2004. Influence of RNA secondary structure on the pre-mRNA splicing process. Mol. Cell. Biol. 24:10505-10514.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 10505-10514
    • Buratti, E.1    Baralle, F.E.2
  • 3
    • 0034766398 scopus 로고    scopus 로고
    • Alternative splicing of the Drosophila Dscam pre-mRNA is both temporally and spatially regulated
    • Celotto, A. M., and B. R. Graveley. 2001. Alternative splicing of the Drosophila Dscam pre-mRNA is both temporally and spatially regulated. Genetics 159:599-608.
    • (2001) Genetics , vol.159 , pp. 599-608
    • Celotto, A.M.1    Graveley, B.R.2
  • 4
    • 0029959408 scopus 로고    scopus 로고
    • Intramolecular structure in yeast introns aids the early steps of in vitro spliceosome assembly
    • Charpentier, B., and M. Rosbash. 1996. Intramolecular structure in yeast introns aids the early steps of in vitro spliceosome assembly. RNA 2:509-522.
    • (1996) RNA , vol.2 , pp. 509-522
    • Charpentier, B.1    Rosbash, M.2
  • 5
    • 0141593581 scopus 로고    scopus 로고
    • Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene
    • Chen, Y., and W. Stephan. 2003. Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene. Proc. Natl. Acad. Sci. USA 100:11499-11504.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 11499-11504
    • Chen, Y.1    Stephan, W.2
  • 7
    • 0025780938 scopus 로고
    • Unexpected point mutations activate cryptic 3′ splice sites by perturbing a natural secondary structure within a yeast intron
    • Deshler, J. O., and J. J. Rossi. 1991. Unexpected point mutations activate cryptic 3′ splice sites by perturbing a natural secondary structure within a yeast intron. Genes Dev. 5:1252-1263.
    • (1991) Genes Dev. , vol.5 , pp. 1252-1263
    • Deshler, J.O.1    Rossi, J.J.2
  • 8
    • 0024366590 scopus 로고
    • Functional domains of the Drosophila melanogaster muscle myosin heavy-chain gene are encoded by alternatively spliced exons
    • George, E. L., M. B. Ober, and C. P. Emerson, Jr. 1989. Functional domains of the Drosophila melanogaster muscle myosin heavy-chain gene are encoded by alternatively spliced exons. Mol. Cell. Biol. 9:2957-2974.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 2957-2974
    • George, E.L.1    Ober, M.B.2    Emerson Jr., C.P.3
  • 9
    • 0035252410 scopus 로고    scopus 로고
    • Alternative splicing: Increasing diversity in the proteomic world
    • Graveley, B. R. 2001. Alternative splicing: increasing diversity in the proteomic world. Trends Genet. 17:100-107.
    • (2001) Trends Genet. , vol.17 , pp. 100-107
    • Graveley, B.R.1
  • 10
    • 26244435561 scopus 로고    scopus 로고
    • Mutually exclusive splicing of the insect Dscam pre-mRNA directed by competing intronic RNA secondary structures
    • Graveley, B. R. 2005. Mutually exclusive splicing of the insect Dscam pre-mRNA directed by competing intronic RNA secondary structures. Cell 123: 65-73.
    • (2005) Cell , vol.123 , pp. 65-73
    • Graveley, B.R.1
  • 11
    • 4644353346 scopus 로고    scopus 로고
    • The organization and evolution of the dipteran and hyme-nopteran Down syndrome cell adhesion molecule (Dscam) genes
    • Graveley, B. R., A. Kaur, D. Gunning, S. L. Zipursky, L. Rowen, and J. C. Clemens. 2004. The organization and evolution of the dipteran and hyme-nopteran Down syndrome cell adhesion molecule (Dscam) genes. RNA 10: 1499-1506.
    • (2004) RNA , vol.10 , pp. 1499-1506
    • Graveley, B.R.1    Kaur, A.2    Gunning, D.3    Zipursky, S.L.4    Rowen, L.5    Clemens, J.C.6
  • 12
    • 0344838611 scopus 로고    scopus 로고
    • Roles of hnRNP A1, SR proteins, and p68 helicase in c-H-ras alternative splicing regulation
    • Guil, S., R. Gattoni, M. Carrascal, J. Abián, J. Stévenin, and M. Bach-Elias. 2003. Roles of hnRNP A1, SR proteins, and p68 helicase in c-H-ras alternative splicing regulation. Mol. Cell. Biol. 23:2927-2941.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 2927-2941
    • Guil, S.1    Gattoni, R.2    Carrascal, M.3    Abián, J.4    Stévenin, J.5    Bach-Elias, M.6
  • 13
    • 0025836145 scopus 로고
    • Myosin functional domains encoded by alternative exons are expressed in specific thoracic muscles of Drosophila
    • Hastings, G. A., and C. P. Emerson, Jr. 1991. Myosin functional domains encoded by alternative exons are expressed in specific thoracic muscles of Drosophila. J. Cell Biol. 114:263-276.
    • (1991) J. Cell Biol. , vol.114 , pp. 263-276
    • Hastings, G.A.1    Emerson Jr., C.P.2
  • 14
    • 0030773773 scopus 로고    scopus 로고
    • Intron self-complementarity enforces exon inclusion in a yeast pre-mRNA
    • Howe, K., and M. J. Ares. 1997. Intron self-complementarity enforces exon inclusion in a yeast pre-mRNA. Proc. Natl. Acad. Sci. USA 94:12467-12472.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 12467-12472
    • Howe, K.1    Ares, M.J.2
  • 16
    • 0025806969 scopus 로고
    • Tissue-specific splicing in vivo of the beta-tropomyosin gene: Dependence on an RNA secondary structure
    • Libri, D., A. Piseri, and M. Y. Fiszman. 1991. Tissue-specific splicing in vivo of the beta-tropomyosin gene: dependence on an RNA secondary structure. Science 252:1842-1845.
    • (1991) Science , vol.252 , pp. 1842-1845
    • Libri, D.1    Piseri, A.2    Fiszman, M.Y.3
  • 17
    • 0036315396 scopus 로고    scopus 로고
    • P68 RNA helicase is an essential human splicing factor that acts at the Ul snRNA-5′ splice site duplex
    • Liu, Z. R. 2002. p68 RNA helicase is an essential human splicing factor that acts at the Ul snRNA-5′ splice site duplex. Mol. Cell. Biol. 22:5443-5450.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 5443-5450
    • Liu, Z.R.1
  • 18
    • 0024976602 scopus 로고
    • Molecular analysis of the para locus, a sodium channel gene in Drosophila
    • Loughney, K., R. Kreber, and B. Ganetzky. 1989. Molecular analysis of the para locus, a sodium channel gene in Drosophila. Cell 58:1143-1154.
    • (1989) Cell , vol.58 , pp. 1143-1154
    • Loughney, K.1    Kreber, R.2    Ganetzky, B.3
  • 20
    • 1442311559 scopus 로고    scopus 로고
    • Stochastic yet biased expression of multiple Dscam splice variants by individual cells
    • Neves, G., J. Zucker, M. Daly, and A. Chess. 2004. Stochastic yet biased expression of multiple Dscam splice variants by individual cells. Nat. Genet. 36:240-246.
    • (2004) Nat. Genet. , vol.36 , pp. 240-246
    • Neves, G.1    Zucker, J.2    Daly, M.3    Chess, A.4
  • 21
  • 24
    • 0028910659 scopus 로고
    • Molecular phylogeny and divergence times of drosophilid species
    • Russo, C. A., N. Takezaki, and M. Nei. 1995. Molecular phylogeny and divergence times of drosophilid species. Mol. Biol. Evol. 12:391-404.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 391-404
    • Russo, C.A.1    Takezaki, N.2    Nei, M.3
  • 25
    • 0034625260 scopus 로고    scopus 로고
    • Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity
    • Schmucker, D., J. C. Clemens, H. Shu, C. A. Worby, J. Xiao, M. Muda, J. E. Dixon, and S. L. Zipursky. 2000. Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity. Cell 101:671-684.
    • (2000) Cell , vol.101 , pp. 671-684
    • Schmucker, D.1    Clemens, J.C.2    Shu, H.3    Worby, C.A.4    Xiao, J.5    Muda, M.6    Dixon, J.E.7    Zipursky, S.L.8
  • 26
    • 0030777330 scopus 로고    scopus 로고
    • Splice-junction elements and intronic sequences regulate alternative splicing of the Drosophila myosin heavy chain gene transcript
    • Standiford, D. M., M. B. Davis, W. Sun, and C. P. Emerson, Jr. 1997. Splice-junction elements and intronic sequences regulate alternative splicing of the Drosophila myosin heavy chain gene transcript. Genetics 147:725-741.
    • (1997) Genetics , vol.147 , pp. 725-741
    • Standiford, D.M.1    Davis, M.B.2    Sun, W.3    Emerson Jr., C.P.4
  • 27
    • 0035148429 scopus 로고    scopus 로고
    • Positive and negative intronic regulatory elements control muscle-specific alternative exon splicing of Drosophila myosin heavy chain transcripts
    • Standiford, D. M., W. T. Sun, M. B. Davis, and C. P. Emerson, Jr. 2001. Positive and negative intronic regulatory elements control muscle-specific alternative exon splicing of Drosophila myosin heavy chain transcripts. Genetics 157:259-271.
    • (2001) Genetics , vol.157 , pp. 259-271
    • Standiford, D.M.1    Sun, W.T.2    Davis, M.B.3    Emerson Jr., C.P.4
  • 28
    • 0036270811 scopus 로고    scopus 로고
    • Structure and evolution of neurexin genes: Insight into the mechanism of alternative splicing
    • Tabuchi, K., and T. C. Sudhof. 2002. Structure and evolution of neurexin genes: insight into the mechanism of alternative splicing. Genomics 79:849-859.
    • (2002) Genomics , vol.79 , pp. 849-859
    • Tabuchi, K.1    Sudhof, T.C.2
  • 29
    • 0029166835 scopus 로고
    • Conserved alternative splicing patterns and splicing signals in the Drosophila sodium channel gene para
    • Thackeray, J. R., and B. Ganetzky. 1995. Conserved alternative splicing patterns and splicing signals in the Drosophila sodium channel gene para. Genetics 141:203-214.
    • (1995) Genetics , vol.141 , pp. 203-214
    • Thackeray, J.R.1    Ganetzky, B.2
  • 30
    • 0037075181 scopus 로고    scopus 로고
    • Drosophila Dscam is required for divergent segregation of sister branches and suppresses ectopic bifurcation of axons
    • Wang, J., C. T. Zugates, I. H. Liang, C. H. Lee, and T. Lee. 2002. Drosophila Dscam is required for divergent segregation of sister branches and suppresses ectopic bifurcation of axons. Neuron 33:559-571.
    • (2002) Neuron , vol.33 , pp. 559-571
    • Wang, J.1    Zugates, C.T.2    Liang, I.H.3    Lee, C.H.4    Lee, T.5
  • 32
    • 4444318773 scopus 로고    scopus 로고
    • Alternative splicing of Drosophila Dscam generates axon guidance receptors that exhibit isoform-specific homophilic binding
    • Wojtowicz, W. M., J. J. Flanagan, S. S. Millard, S. L. Zipursky, and J. C. Clemens. 2004. Alternative splicing of Drosophila Dscam generates axon guidance receptors that exhibit isoform-specific homophilic binding. Cell 118:619-633.
    • (2004) Cell , vol.118 , pp. 619-633
    • Wojtowicz, W.M.1    Flanagan, J.J.2    Millard, S.S.3    Zipursky, S.L.4    Clemens, J.C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.