-
1
-
-
0029974748
-
Model of amino acid substitution and applications to mitochondrial protein evolution
-
Adachi, J. & Hasegawa, M. (1996). Model of amino acid substitution and applications to mitochondrial protein evolution. Journal of Molecular Evolution 42, 459-468.
-
(1996)
Journal of Molecular Evolution
, vol.42
, pp. 459-468
-
-
Adachi, J.1
Hasegawa, M.2
-
2
-
-
84960608823
-
Relationships of the osmeroid fishes and the use of reductive characters in phylogenetic analysis
-
Begle, D. P. (1991). Relationships of the osmeroid fishes and the use of reductive characters in phylogenetic analysis. Systematic Zoology 40, 33-53.
-
(1991)
Systematic Zoology
, vol.40
, pp. 33-53
-
-
Begle, D.P.1
-
3
-
-
27744491245
-
Sundasalanx mekongensis, a new species of clupeiform fish from the Mekong Basin (Teleostei: Sundasalangidae)
-
Britz, R. & Kottelat, M. (1999). Sundasalanx mekongensis, a new species of clupeiform fish from the Mekong Basin (Teleostei: Sundasalangidae). Ichthyological Exploration of Freshwaters 10, 337-344.
-
(1999)
Ichthyological Exploration of Freshwaters
, vol.10
, pp. 337-344
-
-
Britz, R.1
Kottelat, M.2
-
4
-
-
0028082089
-
The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome
-
Chang, Y.-S., Huang, F.-I. & Lo, T.-B. (1994). The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome. Journal of Molecular Evolution 38, 138-155.
-
(1994)
Journal of Molecular Evolution
, vol.38
, pp. 138-155
-
-
Chang, Y.-S.1
Huang, F.-I.2
Lo, T.-B.3
-
5
-
-
0001691335
-
Basal euteleosts: Relationships
-
Moser, H. G., Richardson, W. J., Cohen, D. M., Fahay, M. P., Kendall, A. W. Jr. & Richards, S. L., eds Lawrence, KA: American Society of Ichthyologists and Herpetologists
-
Fink, W. L. (1984). Basal euteleosts: Relationships. In Ontogeny and Systematics of Fishes (Moser, H. G., Richardson, W. J., Cohen, D. M., Fahay, M. P., Kendall, A. W. Jr. & Richards, S. L., eds), pp. 202-206. Lawrence, KA: American Society of Ichthyologists and Herpetologists.
-
(1984)
Ontogeny and Systematics of Fishes
, pp. 202-206
-
-
Fink, W.L.1
-
6
-
-
2442667686
-
Four new avian mitochondrial genomes help get to basic evolutionary questions in the late cretaceous
-
Harrison, G. L., McLenachan, P. A., Phillips, M. J., Slack, K. E., Cooper, A. & Penny, D. (2004). Four new avian mitochondrial genomes help get to basic evolutionary questions in the late cretaceous. Molecular Biology and Evolution 21, 974-983.
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 974-983
-
-
Harrison, G.L.1
McLenachan, P.A.2
Phillips, M.J.3
Slack, K.E.4
Cooper, A.5
Penny, D.6
-
7
-
-
0032740650
-
The complete mitochondrial DNA sequence of the Atlantic salmon, Salmo solar
-
Hurst, C. D., Bartlett, S. E., Davidson, W. S. & Bruce, I. J. (1999). The complete mitochondrial DNA sequence of the Atlantic salmon, Salmo solar. Gene 239, 237-242.
-
(1999)
Gene
, vol.239
, pp. 237-242
-
-
Hurst, C.D.1
Bartlett, S.E.2
Davidson, W.S.3
Bruce, I.J.4
-
8
-
-
0000675190
-
Complete mitochondrial DNA sequence of the Japanese sardine, Sardinops melanostictus
-
Inoue, J. G., Miya, M., Tsukamoto, K. & Nishida, M. (2000). Complete mitochondrial DNA sequence of the Japanese sardine, Sardinops melanostictus. Fisheries Science 66, 924-932.
-
(2000)
Fisheries Science
, vol.66
, pp. 924-932
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
9
-
-
0034904214
-
A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences
-
Inoue, J. G., Miya, M., Tsukamoto, K. & Nishida, M. (2001a). A mitogenomic perspective on the basal teleostean phylogeny: Resolving higher-level relationships with longer DNA sequences. Molecular Phylogenetics and Evolution 20, 275-285.
-
(2001)
Molecular Phylogenetics and Evolution
, vol.20
, pp. 275-285
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
10
-
-
0034997411
-
Complete mitochondrial DNA sequence of the Japanese eel Anguilla japonica
-
Inoue, J. G., Miya, M., Aoyama, J., Ishikawa, S., Tsukamoto, K. & Nishida, M. (2001b). Complete mitochondrial DNA sequence of the Japanese eel Anguilla japonica. Fisheries Science 67, 118-125.
-
(2001)
Fisheries Science
, vol.67
, pp. 118-125
-
-
Inoue, J.G.1
Miya, M.2
Aoyama, J.3
Ishikawa, S.4
Tsukamoto, K.5
Nishida, M.6
-
11
-
-
0035049036
-
Complete mitochondrial DNA sequence of Conger myriaster (Teleostei: Anguilliformes): Novel gene order for vertebrate mitochondrial genomes and the phylogenetic implications for anguilliform families
-
Inoue, J. G., Miya, M., Tsukamoto, K. & Nishida, M. (2001c). Complete mitochondrial DNA sequence of Conger myriaster (Teleostei: Anguilliformes): Novel gene order for vertebrate mitochondrial genomes and the phylogenetic implications for anguilliform families. Journal of Molecular Evolution 52, 311-320.
-
(2001)
Journal of Molecular Evolution
, vol.52
, pp. 311-320
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
12
-
-
0000307861
-
Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus
-
Inoue, J. G., Miya, M., Tsukamoto, K. & Nishida, M. (2001d). Complete mitochondrial DNA sequence of the Japanese anchovy Engraulis japonicus. Fisheries Science 67, 828-835.
-
(2001)
Fisheries Science
, vol.67
, pp. 828-835
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
13
-
-
12244307474
-
Basal actinopterygian relationships: A mitogenomic perspective on the phylogeny of the "ancient fish."
-
Inoue, J. G., Miya, M., Tsukamoto, K. & Nishida, M. (2003). Basal actinopterygian relationships: A mitogenomic perspective on the phylogeny of the "ancient fish." Molecular Phylogenetics and Evolution 26, 110-120.
-
(2003)
Molecular Phylogenetics and Evolution
, vol.26
, pp. 110-120
-
-
Inoue, J.G.1
Miya, M.2
Tsukamoto, K.3
Nishida, M.4
-
14
-
-
0034952488
-
Complete mitochondrial DNA sequence of ayu Plecoglossus altivelis
-
Ishiguro, N., Miya, M. & Nishida, M. (2001). Complete mitochondrial DNA sequence of ayu Plecoglossus altivelis. Fisheries Science 67, 474-481.
-
(2001)
Fisheries Science
, vol.67
, pp. 474-481
-
-
Ishiguro, N.1
Miya, M.2
Nishida, M.3
-
15
-
-
0038175392
-
Basal euteleostean relationships: A mitogenomic perspective on the phylogenetic reality of the "Protacanthopterygii."
-
Ishiguro, N. B., Miya, M. & Nishida, M. (2003). Basal euteleostean relationships: A mitogenomic perspective on the phylogenetic reality of the "Protacanthopterygii." Molecular Phylogenetics and Evolution 27, 476-488.
-
(2003)
Molecular Phylogenetics and Evolution
, vol.27
, pp. 476-488
-
-
Ishiguro, N.B.1
Miya, M.2
Nishida, M.3
-
16
-
-
0000998035
-
Schindleria: A paedomorphic goby (Teleostei: Gobioidei)
-
Johnson, G. D. & Brothers, E. B. (1993). Schindleria: A paedomorphic goby (Teleostei: Gobioidei). Bulletin of Marine Science 52, 441-471.
-
(1993)
Bulletin of Marine Science
, vol.52
, pp. 441-471
-
-
Johnson, G.D.1
Brothers, E.B.2
-
17
-
-
0000298485
-
Relationships of lower euteleostean fishes
-
Stiassny, M. L. J., Parenti, L. R. & Johnson, G. D., eds San Diego, CA: Academic Press
-
Johnson, G. D. & Patterson, C. (1996). Relationships of lower euteleostean fishes. In Interrelationships of Fishes (Stiassny, M. L. J., Parenti, L. R. & Johnson, G. D., eds), pp. 251-332. San Diego, CA: Academic Press.
-
(1996)
Interrelationships of Fishes
, pp. 251-332
-
-
Johnson, G.D.1
Patterson, C.2
-
18
-
-
0035539901
-
Complete mitochondrial DNA sequence of Aulopus japonicus (Teleostei: Aulopiformes), a basal Eurypterygii: Longer DNA sequences and higher-level relationships
-
Kawaguchi, A., Miya, M. & Nishida, M. (2001). Complete mitochondrial DNA sequence of Aulopus japonicus (Teleostei: Aulopiformes), a basal Eurypterygii: Longer DNA sequences and higher-level relationships. Ichthyological Research 48, 213-223.
-
(2001)
Ichthyological Research
, vol.48
, pp. 213-223
-
-
Kawaguchi, A.1
Miya, M.2
Nishida, M.3
-
19
-
-
0035145155
-
Phylogenetic systematics turns over a new leaf
-
Lewis, P. O. (2001). Phylogenetic systematics turns over a new leaf. Trends in Ecology and Evolution 16, 30-37.
-
(2001)
Trends in Ecology and Evolution
, vol.16
, pp. 30-37
-
-
Lewis, P.O.1
-
20
-
-
0041886963
-
A hidden Markov model for progressive multiple alignment
-
Löytynoja, A. & Milinkovitch, M. C. (2003). A hidden Markov model for progressive multiple alignment. Bioinformatics 19, 1505-1513.
-
(2003)
Bioinformatics
, vol.19
, pp. 1505-1513
-
-
Löytynoja, A.1
Milinkovitch, M.C.2
-
22
-
-
0033191527
-
Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): First example of transfer RNA gene rearrangements in bony fishes
-
Miya, M. & Nishida, M. (1999). Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): First example of transfer RNA gene rearrangements in bony fishes. Marine Biotechnology 1, 416-426.
-
(1999)
Marine Biotechnology
, vol.1
, pp. 416-426
-
-
Miya, M.1
Nishida, M.2
-
23
-
-
0034497887
-
Use of mitogenomic information in teleostean molecular phylogenetics: A tree-based exploration under the maximum-parsimony optimality criterion
-
Miya, M. & Nishida, M. (2000). Use of mitogenomic information in teleostean molecular phylogenetics: A tree-based exploration under the maximum-parsimony optimality criterion. Molecular Phylogenetics and Evolution 17, 437-455.
-
(2000)
Molecular Phylogenetics and Evolution
, vol.17
, pp. 437-455
-
-
Miya, M.1
Nishida, M.2
-
24
-
-
0032373939
-
The complete sequence of mitochondrial genome from a gynogenetic triploid "ginbuna" (Carassius auratus longsdorfi)
-
Murakami, M., Yamashita, Y. & Fujitani, H. (1998). The complete sequence of mitochondrial genome from a gynogenetic triploid "ginbuna" (Carassius auratus longsdorfi). Zoological Science 15, 335-337.
-
(1998)
Zoological Science
, vol.15
, pp. 335-337
-
-
Murakami, M.1
Yamashita, Y.2
Fujitani, H.3
-
26
-
-
1642341403
-
Bayesian phylogenetic analysis of combined data
-
Nylander, J. A. A., Ronquist, F., Huelsenbeck, J. P. & Nieves-Aldrey, J. L. (2004). Bayesian phylogenetic analysis of combined data. Systematic Biology 53, 47-67.
-
(2004)
Systematic Biology
, vol.53
, pp. 47-67
-
-
Nylander, J.A.A.1
Ronquist, F.2
Huelsenbeck, J.P.3
Nieves-Aldrey, J.L.4
-
28
-
-
0141721426
-
The root of the mammalian tree inferred from whole mitochondrial genomes
-
Phillips, M. J. & Penny, D. (2003). The root of the mammalian tree inferred from whole mitochondrial genomes. Molecular Phylogenetics and Evolution 28, 171-185.
-
(2003)
Molecular Phylogenetics and Evolution
, vol.28
, pp. 171-185
-
-
Phillips, M.J.1
Penny, D.2
-
29
-
-
0031773680
-
ModelTest: Testing the model of DNA substitution
-
Posada, D. & Crandall, K. A. (1998). ModelTest: Testing the model of DNA substitution. Bioinformatics 14, 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
30
-
-
0009221983
-
Sundasalangidae, a new family of minute freshwater salmoniform fishes from Southeast Asia
-
Roberts, T. R. (1981). Sundasalangidae, a new family of minute freshwater salmoniform fishes from Southeast Asia. Proceedings of the California Academy of Sciences 42, 295-302.
-
(1981)
Proceedings of the California Academy of Sciences
, vol.42
, pp. 295-302
-
-
Roberts, T.R.1
-
31
-
-
0010990683
-
Skeletal anatomy and classification of the neotenic Asian salmoniform superfamily Salangoidea (icefishes or noodlefishes)
-
Roberts, T. R. (1984). Skeletal anatomy and classification of the neotenic Asian salmoniform superfamily Salangoidea (icefishes or noodlefishes). Proceedings of the California Academy of Sciences 43, 179-220.
-
(1984)
Proceedings of the California Academy of Sciences
, vol.43
, pp. 179-220
-
-
Roberts, T.R.1
-
32
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F. & Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
33
-
-
0037380299
-
Mitochondrial genomics of ostariophysan fishes: Perspectives on phylogeny and biogeography
-
Saitoh, K., Miya, M., Inoue, J. G., Ishiguro, N. B. & Nishida, M. (2003). Mitochondrial genomics of ostariophysan fishes: Perspectives on phylogeny and biogeography. Journal of Molecular Evolution 56, 464-472.
-
(2003)
Journal of Molecular Evolution
, vol.56
, pp. 464-472
-
-
Saitoh, K.1
Miya, M.2
Inoue, J.G.3
Ishiguro, N.B.4
Nishida, M.5
-
34
-
-
0002426164
-
Notes on the anatomy and relationships of Sundasalanx Roberts (Teleostei, Clupeidae), with descriptions of four new species from Borneo
-
Siebert, D. J. (1997). Notes on the anatomy and relationships of Sundasalanx Roberts (Teleostei, Clupeidae), with descriptions of four new species from Borneo. Bulletin of the Natural History Museum (Zoology Series) 63, 13-26.
-
(1997)
Bulletin of the Natural History Museum (Zoology Series)
, vol.63
, pp. 13-26
-
-
Siebert, D.J.1
-
35
-
-
0037353449
-
Molecular phylogeny of the gobioid fishes (Teleostei: Perciformes: Gobioidei)
-
Thacker, C. E. (2003). Molecular phylogeny of the gobioid fishes (Teleostei: Perciformes: Gobioidei). Molecular Phylogenetics and Evolution 26, 354-368.
-
(2003)
Molecular Phylogenetics and Evolution
, vol.26
, pp. 354-368
-
-
Thacker, C.E.1
-
36
-
-
0026670894
-
The complete nucleotide sequence of the Crossostoma lacustre mitochondrial genome: Conservation and variations among vertebrates
-
Tzeng, C.-S., Hui, C.-F., Shen, S.-C. & Huang, P.-C. (1992). The complete nucleotide sequence of the Crossostoma lacustre mitochondrial genome: Conservation and variations among vertebrates. Nucleic Acids Research 20, 4853-4858.
-
(1992)
Nucleic Acids Research
, vol.20
, pp. 4853-4858
-
-
Tzeng, C.-S.1
Hui, C.-F.2
Shen, S.-C.3
Huang, P.-C.4
-
37
-
-
10244268303
-
Schindleroidei: Development and relationships
-
Moser, H. G., Richardson, W. J., Cohen, D. M., Fahay, M. P., Kendall, A. W. Jr. & Richards, S. L., eds Lawrence, KA: American Society of Ichthyologists and Herpetologists
-
Watson, M., Stevens, E. G. & Matarese, A. C. (1984). Schindleroidei: development and relationships. In Ontogeny and Systematics of Fishes (Moser, H. G., Richardson, W. J., Cohen, D. M., Fahay, M. P., Kendall, A. W. Jr. & Richards, S. L., eds), pp. 552-554. Lawrence, KA: American Society of Ichthyologists and Herpetologists.
-
(1984)
Ontogeny and Systematics of Fishes
, pp. 552-554
-
-
Watson, M.1
Stevens, E.G.2
Matarese, A.C.3
-
38
-
-
0028214103
-
Estimating the pattern of nucleotide substitution
-
Yang, Z. B. (1994). Estimating the pattern of nucleotide substitution. Journal of Molecular Evolution 39, 105-111.
-
(1994)
Journal of Molecular Evolution
, vol.39
, pp. 105-111
-
-
Yang, Z.B.1
-
39
-
-
0029621005
-
The complete nucleotide sequence of the mitochondrial DNA genome of the rainbow trout, Oncorhynchus mykiss
-
Zardoya, R., Garrido-Pertierra, A. & Bautista, J. M. (1995). The complete nucleotide sequence of the mitochondrial DNA genome of the rainbow trout, Oncorhynchus mykiss. Journal of Molecular Evolution 41, 942-951.
-
(1995)
Journal of Molecular Evolution
, vol.41
, pp. 942-951
-
-
Zardoya, R.1
Garrido-Pertierra, A.2
Bautista, J.M.3
|