Complete mitochondrial DNA sequence of the Japanese eel Anguilla japonica

Fisheries Science

Volumn 67, Issue 1, 2001, Pages 118-125

  Inoue, Jun G ^a   Miya, Masaki ^b   Aoyama, Jun ^a   Ishikawa, Satoshi ^a   Tsukamoto, Katsumi ^a   Nishida, Mutsumi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b NATURAL HISTORY MUSEUM AND INSTITUTE   (Japan)

Author keywords

Anguilla japonica; Complete mitochondrial DNA sequence; Japanese eel; Long PCR; Mitogenomics

Indexed keywords

BASE PAIRING; DNA TEMPLATE; GENE PRODUCT; MITOCHONDRIAL DNA; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIMER DNA; SPECIFICITY; TRANSFER RNA;

ANGUILLA JAPONICA;

EID: 0034997411     PISSN: 09199268     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1444-2906.2001.00207.x     Document Type: Article

References (27)

1. Ege V. A revision of the genus Anguilla Shaw, a systematic, phylogenetic and geographical study. Dana Rep. 1939; 16: 1-256.
2. Matsui I. Eel Biology - Biological Study. Koseisha-Koseikaku, Tokyo. 1972.
3. Castle PHJ, Williamson GR. On the validity of the freshwater eel species Anguilla ancestralis Ege, from Celebes. Copeia 1974; 2: 569-570.
4. Dijkstra LH, Jellyman DJ. Is the subspecies classification of the freshwater eels Anguilla australis australis Richardson and A. a. schmidtii Phillipps still valid? Mar. Freshwater Res. 1999; 50: 261-263.
5. Jespersen P. Indo-Pacific leptocephalids of the genus Anguilla: Systematic and biological studies. Dana Rep. 1942; 22: 1-128.
6. Chan IKK, Chan DKO, Lee SC, Tsukamoto K. Genetic variability of the Japanese eel Anguilla japonica (Temminck & Schlegel) related to latitude. Ecol. Freshwater. Fish. 1997; 6: 45-49.
7. Tsukamoto K. Discovery of the spawning area for Japanese eel. Nature 1992; 356: 789-791.
8. Sang T-K, Chang H-Y, Chen C-T, Hui C-F. Population structure of the Japanese eel Anguilla japonica. Mol. Biol. Evol. 1994; 11: 250-260.
9. Taniguchi N, Numachi K. Genetic variation of 6-phospho-gluconate dehydrogenase, isocitrate dehydrogenase, and glutamic-oxaloacetic transaminase in the liver of Japanese eel. Nippon Suisan Gakkaishi 1978; 44: 1351-1355.
10. Miya M, Nishida M. Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): First example of transter RNA gene rearrangements in bony fishes. Mar. Biotechnol. 1999; 1: 416-426.
11. Anderson S, Bankier AT, Barrell BG et al. Sequence and organization of the human mitochondrial genome. Nature 1981; 290: 457-465.
12. Tzeng C-S, Hui C-F, Shen S-C, Huan PC. The complete nucleotide sequence of the Crossostoma lacustre mitochondrial genome: Conservation and variations among vertebrates. Nucleic Acids Res. 1992; 20: 4853-4858.
13. Chang Y-S, Huang F-I, Lo T-B. The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome. J. Mol. Evol. 1994; 38: 138-155.
14. Zardoya R, Garrido-Pertierra A, Bautista JM. The complete nucleotide sequence of the mitochondrial DNA genome of the rainbow trout, Oncorhynchus mykiss. J. Mol. Evol. 1995; 41: 942-951.
15. Johansen S, Bakke I. The complete mitochondrial DNA sequence of Atlantic cod (Gadus morhua): Relevance to taxonomic studies among codfishes. Mol. Mar. Biol. Biotechnol. 1996; 5: 203-214.
16. Noack K, Zardoya R, Meyer A. The complete mitochondrial DNA sequence of the bichir (Polypterus ornatipinnis), a basal ray-finned fish: Ancient establishment of the consensus vertebrate gene order. Genetics 1996; 144: 1165-1180.
17. Zardoya R, Meyer A. The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolli) supports its phylogenetic position as a close relative of land vertebrates. Genetics 1996; 142: 1249-1263.
18. Kumazawa Y, Nishida M. Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J. Mol. Evol. 1993; 37: 380-398.
19. Gutell RR, Gray MW, Schnare MN. A compilation of large subunit (23S and 23S-like) ribosome RNA structures. Nucleic Acids Res. 1993; 21: 3055-3074.
20. Dowling TE, Moritz C, Palmer JD, Rieseberg LH. Nucleic acids III. Analysis of fragments and restriction sites. In: Hillis DM, Moritz C, Mable BK (eds). Molecular Systematics, 2nd edn. Sinauer Associates, Sunderland. 1996; 249-320.
21. Zardoya R, Meyer A. The complete DNA sequence of the mitochondrial genome of a 'living fossil', the coelacanth (Latimeria chalumnae). Genetics 1997; 146: 995-1010.
22. Murakami M, Yamashita Y, Fujitani H. The complete sequence of mitochondrial genome from a gynogenetic triploid 'ginbuna' (Carassius auratus langsdorfi). Zool. Sci. 1998; 15: 335-337.
23. Hurst CD, Bartlett SE, Davidson WS, Bruce IJ. The complete mitochondrial DNA sequence of the Atlantic salmon, Salmo salar. Gene 1999; 239: 237-242.
24. Inoue JG, Miya M, Tsukamoto K, Nishida M. Complete mitochondrial DNA sequence of Japanese sardine Sardinops melanostictus. Fisheries Sci. 2000; 66: 924-932.
25. Hixson JE, Wong TW, Clayton DA. Both the conserved stem loop and divergent 5′-flanking sequences are required for initiation at the human mitochondrial origin of light-strand DNA replication. J. Biol. Chem. 1986; 261: 2384-2390.
26. Walberg MW, Clayton DA. Sequence and properties of the human KB cell and mouse L cell D-loop regions of mitochondrial DNA. Nucleic Acids Res. 1981; 9: 5411-5421.
27. Doda JN, Wright CT, Clayton DA. Elongation of displacement-loop strands in human and mouse mitochondrial DNA is arrested near specific template sequences. Proc. Natl Acad. Sci. USA 1981; 78: 6116-6120.