Phylogenetic systematics turns over a new leaf

Trends in Ecology and Evolution

Volumn 16, Issue 1, 2001, Pages 30-37

  Lewis, Paul O ^a  

^a UNIVERSITY OF CONNECTICUT   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EVOLUTIONARY BIOLOGY; MOLECULAR ANALYSIS; PHYLOGENETICS;

BAYES THEOREM; EVOLUTION; MOLECULAR DYNAMICS; PHYLOGENY; RESEARCH; REVIEW;

EID: 0035145155     PISSN: 01695347     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0169-5347(00)02025-5     Document Type: Review

References (39)

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5. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
6. The general stochastic model of nucleotide substitution
7. Sample size for a phylogenetic inference
8. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
9. Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites
10. Among-site rate variation and its impact on phylogenetic analyses
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14. PAML: A program package for phylogenetic analysis by maximum likelihood
15. A likelihood approach for comparing synonymous and nonsynonymous substitution rates, with application to the chloroplast genome
16. A codon-based model of nucleotide substitution for protein-coding DNA sequences
17. Neighbor joining and maximum likelihood with RNA sequences: Addressing the interdependence of sites
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19. Likelihood of ancestor states in adaptive radiation
20. Reconstructing ancestor states with maximum likelihood: Support for one- and two-rate models
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22. Reconstructing ancestral character states: A critical reappraisal
23. Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters
24. Two feathered dinosaurs from northeastern China
25. Accelerated evolution as a consequence of transitions to mutualism
26. Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees
27. Phylogenetic inference for binary data on dendrograms using Markov chain Monte Carlo
28. Bayesian phylogenetic inference via Markov chain Monte Carlo methods
29. Markov chain Monte Carlo for the Bayesian analysis of evolutionary trees from aligned molecular sequences
30. Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference
31. Bayesian phylogenetic inference using DNA sequences: A Markov Chain Monte Carlo method
32. Equation of state calculations by fast computing machines
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34. A compound Poisson process for relaxing the molecular clock
35. Estimating the rate of evolution of the rate of molecular evolution
36. Confidence intervals on phylogenies: An approach using the bootstrap