The budding yeast protein Chl1p has a role in transcriptional silencing, rDNA recombination, and aging

Biochemical and Biophysical Research Communications

Volumn 337, Issue 1, 2005, Pages 167-172

  Das, Shankar Prasad ^a   Sinha, Pratima ^a  

^a BOSE INSTITUTE   (India)

Author keywords

Aging; Chl1p; Heat shock; Life span; rDNA recombination; Sir proteins; Sister chromatid cohesion; Transcriptional silencing; Yeast

Indexed keywords

PROTEIN; PROTEIN CHL1P; RIBOSOME DNA; SILENT INFORMATION REGULATOR PROTEIN; SILENT INFORMATION REGULATOR PROTEIN 2; UNCLASSIFIED DRUG;

AGING; ARTICLE; CELL SURVIVAL; CHROMATIN STRUCTURE; DNA RECOMBINATION; GENE SILENCING; HEAT STRESS; NONHUMAN; PRIORITY JOURNAL; SILENCER ELEMENT; TELOMERE; YEAST; YEAST CELL;

CHROMOSOMAL PROTEINS, NON-HISTONE; DNA, RIBOSOMAL; GENE EXPRESSION REGULATION, FUNGAL; GENE SILENCING; HEAT; MUTATION; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SILENT INFORMATION REGULATOR PROTEINS, SACCHAROMYCES CEREVISIAE; SISTER CHROMATID EXCHANGE; TELOMERE; TRANSCRIPTION, GENETIC;

SACCHAROMYCETALES;

EID: 25844517501     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2005.09.034     Document Type: Article

References (48)

1. Y. Huang Transcriptional silencing in Saccharomyces cerevisiae and Schizosaccharomyces pombe Nucleic Acids Res. 30 2002 1465 1482
2. L.N. Rusche, A.L. Kirchmaier, and J. Rine The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae Annu. Rev. Biochem. 272 2003 481 516
3. L. Chen, and J. Widom Molecular basis of transcriptional silencing in budding yeast Biochem. Cell Biol. 82 2004 413 418
4. C.A. Fox, and K.H. McConnell Toward biochemical understanding of a transcriptionally silenced chromosomal domain in Saccharomyces cerevisiae J. Biol. Chem. 280 2005 8629 8632
5. L. Guarente Diverse and dynamic functions of the Sir silencing complex Nat. Genet. 23 1999 281 285
6. S.M. Gasser, and M.M. Cockell The molecular biology of the Sir proteins Gene 279 2001 1 16
7. D. Shore The Sir2 protein family: a novel deacetylase for gene silencing and more Proc. Natl. Acad. Sci. USA 97 2000 14030 14032
8. G. Blander, and L. Guarente The Sir2 family of protein deacetylases Annu. Rev. Biochem. 73 2004 417 435
9. J. Rine, and I. Herskowitz Four genes responsible for a position effect on expression from HML and HMR in Saccharomyces cerevisiae Genetics 116 1987 9 22
10. O.M. Aparicio, B.L. Billington, and D.E. Gottschling Modifiers of position effect are shared between telomeric and silent mating-type loci in S. cerevisiae Cell 66 1991 1279 1287
11. F.E. Pryde, and E.J. Louis Limitations of silencing at native yeast telomeres EMBO J. 18 1999 2538 2550
12. J.S. Smith, and J.D. Boeke An unusual form of transcriptional silencing in yeast ribosomal DNA Genes Dev. 11 1997 241 254
13. M. Bryk, M. Banerjee, M. Murphy, K.E. Knudsen, D.J. Garfinkel, and M.J. Curcio Transcriptional silencing of Ty1 elements in the RDN1 locus of yeast Genes Dev. 11 1997 255 269
14. S. Gottlieb, and R.E. Esposito A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA Cell 56 1989 771 776
15. J.E. Haber Bisexual mating behaviour in a diploid of Saccharomyces cerevisiae: evidence for genetically controlled non-random chromosome loss during vegetative growth Genetics 78 1974 843 858
16. 2/M EMBO J. 9 1990 4347 4358
17. M.L. Mayer, I. Pot, M. Chang, H. Xu, V. Aneliunas, T. Kwok, R. Newitt, R. Aebersold, C. Boone, G.W. Brown, and P. Hieter Identification of protein complexes required for efficient sister chromatid cohesion Mol. Biol. Cell 15 2004 1736 1745
18. Ctf18/Dcc1/Ctf8, the helicase chl1 and the polymerase-α-associated protein Ctf4 is essential for chromatid disjunction during meiosis II J. Cell Sci. 117 2004 3547 3559
19. R.V. Skibbens Chl1p, a DNA helicase-like protein in budding yeast, functions in sister-chromatid cohesion Genetics 166 2004 33 42
20. K.S. Weiler, L. Szeto, and J.R. Broach Mutations affecting donor preference during mating type interconversion in Saccharomyces cerevisiae Genetics 139 1995 1495 1510
21. S.L. Holloway CHL1 is a nuclear protein with an essential ATP binding site that exhibits a size-dependent effect on chromosome segregation Nucleic Acids Res. 28 2000 3056 3064
22. S.B. Cantor, D.W. Bell, S. Ganesan, E.M. Kass, R. Drapkin, S. Grossman, D.C. Wahrer, D.C. Sgroi, W.S. Lane, D.A. Haber, and D.M. Livingston BACH1, a novel helicase-like protein, interacts directly with BRCA1 and contributes to its DNA repair function Cell 105 2001 149 160
23. B. Suter, A. Tong, M. Chang, L. Yu, G.W. Brown, C. Boone, and J. Rine The origin recognition complex links replication, sister chromatid cohesion and transcriptional silencing in Saccharomyces cerevisiae Genetics 167 2004 579 591
24. C.G. Riedel, J. Gregan, S. Gruber, and K. Nasmyth Is chromatin remodeling required to build sister-chromatid cohesion? Trends Biochem. Sci. 29 2004 389 392
25. G.T. Maine, P. Sinha, and B.K. Tye Mutants of S. cerevisiae defective in the maintenance of minichromosomes Genetics 106 1984 365 385
26. R.S. Sikorski, and J.D. Boeke In vitro mutagenesis and plasmid shuffling: from cloned gene to mutant yeast. Guide to yeast genetics and molecular biology C. Guthrie G.R. Fink Methods in Enzymology vol. 194 1991 Academic Press San Diego, CA 310
27. R.D. Gietz, and A. Sugino New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites Gene 74 1988 527 534
28. D.T. Burke, G.F. Carle, and M.V. Olson Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors Science 236 1987 806 812
29. S. Hajra, Kinetochore structure of the budding yeast Saccharomyces cerevisiae: a study using genetic and protein-protein interactions, Ph.D. thesis, Jadavpur University, Kolkata, 2003.
30. J.R. Broach, J.N. Strathern, and J.B. Hicks Transformation in yeast: development of a hybrid cloning vector and isolation of the can1 gene Gene 8 1979 121 133
31. N. Roy, and K.W. Runge The ZDS1 and ZDS2 proteins require the Sir3p component of yeast silent chromatin to enhance the stability of short linear centromeric plasmids Chromosoma 108 1999 146 161
32. M.S. Longtine, A. McKenzie III, D.J. Demarini, N.G. Shah, A. Wach, A. Brachat, P. Philippsen, and J.R. Pringle Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae Yeast 14 1998 953 961
33. N. Roy, and K.W. Runge Two paralogs involved in transcriptional silencing that antagonistically control yeast life span Curr. Biol. 10 2000 111 114
34. R.J. Merker, and H.L. Klein hpr1Δ affects ribosomal DNA recombination and cell life span in Saccharomyces cerevisiae Mol. Cell. Biol. 22 2002 421 429
35. B.K. Kennedy, N.R. Austriaco Jr., and L. Guarente Daughter cells of Saccharomyces cerevisiae from old mothers display a reduced life span J. Cell Biol. 127 1994 1985 1993
36. V. Lundblad, and J.W. Szostak A mutant with a defect in telomere elongation leads to senescence in yeast Cell 57 1989 633 643
37. F. Palladino, T. Laroche, E. Gilson, A. Axelrod, L. Pillus, and S.M. Gasser SIR3 and SIR4 proteins are required for the positioning and integrity of yeast telomeres Cell 75 1993 543 555
38. M.P. Longhese, V. Paciotti, H. Neecke, and G. Lucchini Checkpoint proteins influence telomeric silencing and length maintenance in budding yeast Genetics 155 2000 1577 1591
39. T. Kobayashi, T. Horiuchi, P. Tongaonkar, L. Vu, and N. Nomura SIR2 regulates recombination between different rDNA repeats, but not recombination within individual rRNA genes in yeast Cell 117 2004 441 453
40. D.A. Sinclair, and L. Guarente Extrachromosomal rDNA circles- a cause of aging in yeast Cell 91 1997 1033 1042
41. D. Shore Cellular senescence: lessons from yeast for human aging? Curr. Biol. 8 1998 R192 R195
42. K.J. Bitterman, O. Medvedik, and D.A. Sinclair Longevity regulation in Saccharomyces cerevisiae: linking metabolism, genome stability and heterochromatin Microbiol. Mol. Biol. Rev. 67 2003 376 399
43. H. Aguilaniu, L. Gustafsson, M. Rigoulet, and T. Nystrom Asymmetric inheritance of oxidatively damaged proteins during cytokinesis Science 299 2003 1751 1753
44. B.K. Kennedy, N.R. Austriaco Jr., J. Zhang, and L. Guarente Mutation in the silencing gene SIR4 can delay aging in S. cerevisiae Cell 80 1995 485 496
45. J.F. Davidson, and R.H. Schiestl Mitochondrial respiratory electron carriers are involved in oxidative stress during heat stress in Saccharomyces cerevisiae Mol. Cell. Biol. 21 2001 8483 8489
46. A. Lau, H. Blitzblau, and S.P. Bell Cell-cycle control of the establishment of mating-type silencing in S. cerevisiae Genes Dev. 16 2002 2935 2945
47. D. Donze, C.R. Adams, J. Rine, and R.T. Kamakaka The boundaries of the silenced HMR domain in Saccharomyces cerevisiae Genes Dev. 13 1999 698 708
48. P. Sinha, V. Chang, and B.K. Tye A mutant that affects the function of autonomously replicating sequences in yeast J. Mol. Biol. 192 1986 805 814