Samle phenotype clusters in high-density oligonucleotide microarray data sets are revealed using Isomap, a nonlinear algorithm

BMC Bioinformatics

Volumn 6, Issue , 2005, Pages

  Dawson, Kevin ^a   Rodriguez, Raymond L ^a   Malyj, Wasyl ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AFFYMETRIX MICROARRAYS; DIMENSIONALITY REDUCTION; ENVIRONMENTAL FACTORS; ENVIRONMENTAL VARIABLES; HIGH-DENSITY OLIGONUCLEOTIDE MICROARRAY; LOW-DIMENSIONAL STRUCTURES; NONLINEAR INTERACTIONS; SPINAL CORD INJURIES (SCI);

COMPUTERIZED TOMOGRAPHY; GENES; OLIGONUCLEOTIDES; TISSUE;

CLUSTERING ALGORITHMS;

AMYGDALOID NUCLEUS; ARTICLE; DISEASE SEVERITY; DNA MICROARRAY; GENE CLUSTER; GENE EXPRESSION; GENETIC ALGORITHM; GENETIC ANALYSIS; GENETIC MODEL; HIGH THROUGHPUT SCREENING; NONHUMAN; PHENOTYPE; PREDICTION; RAT; SPINAL CORD INJURY; ALGORITHM; ANIMAL; BIOLOGICAL MODEL; BIOLOGY; CELL DEATH; CHROMOSOME MAP; CLUSTER ANALYSIS; DRUG EFFECTS; DRUG SCREENING; GENETICS; HL 60 CELL LINE; HUMAN; INFORMATION PROCESSING; NERVE CELL; NONLINEAR SYSTEM; PATHOLOGY; PROCEDURES; STATISTICAL BIAS;

ALGORITHMS; ANIMALS; BIAS (EPIDEMIOLOGY); CELL DEATH; CHROMOSOME MAPPING; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; DATA DISPLAY; DRUG EVALUATION, PRECLINICAL; HL-60 CELLS; HUMANS; MODELS, GENETIC; NEURONS; NONLINEAR DYNAMICS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; RATS; SPINAL CORD INJURIES;

EID: 25444512607     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-6-195     Document Type: Article

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