-
1
-
-
0034885052
-
AAA+ superfamily ATPases: Common structure—diverse function. Genes
-
Ogura, T. & Wilkinson, A.J. AAA+ superfamily ATPases: common structure—diverse function. Genes Cells 6, 575-597 (2001).
-
(2001)
Cells
, vol.6
, pp. 575-597
-
-
Ogura, T.1
Wilkinson, A.J.2
-
2
-
-
0032483546
-
A subcomplex of the proteasome regulatory particle required for ubiquitin-conjugate degradation and related to the COP9-signalosome and eIF3
-
Glickman, M.H. et al. A subcomplex of the proteasome regulatory particle required for ubiquitin-conjugate degradation and related to the COP9-signalosome and eIF3. Cell 94, 615-623 (1998).
-
(1998)
Cell
, vol.94
, pp. 615-623
-
-
Glickman, M.H.1
-
3
-
-
0030936847
-
Protein quality control: Triage by chaper- ones and proteases
-
Gottesman, S., Wickner, S. & Maurizi, M.R. Protein quality control: triage by chaper- ones and proteases. Genes Dev. 11, 815-823 (1997).
-
(1997)
Genes Dev
, vol.11
, pp. 815-823
-
-
Gottesman, S.1
Wickner, S.2
Maurizi, M.R.3
-
4
-
-
0030726160
-
Regulatory subunits of energy-dependent proteases
-
Gottesman, S., Maurizi, M.R. & Wickner, S. Regulatory subunits of energy-dependent proteases. Cell 91, 435-438 (1997).
-
(1997)
Cell
, vol.91
, pp. 435-438
-
-
Gottesman, S.1
Maurizi, M.R.2
Wickner, S.3
-
5
-
-
0030925223
-
Crystal structure of heat shock locus V (HslV) from Escherichia coli
-
Bochtler, M., Ditzel, L., Groll, M. & Huber, R. Crystal structure of heat shock locus V (HslV) from Escherichia coli. Proc. Natl. Acad. Sci. USA 94, 6070-6074 (1997).
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 6070-6074
-
-
Bochtler, M.1
Ditzel, L.2
Groll, M.3
Huber, R.4
-
6
-
-
0030897031
-
Structure of 20S proteasome from yeast at 2.4 A resolution
-
Groll, M. et al. Structure of 20S proteasome from yeast at 2.4 A resolution. Nature 386, 463-471 (1997).
-
(1997)
Nature
, vol.386
, pp. 463-471
-
-
Groll, M.1
-
7
-
-
0030691115
-
The structure of ClpP at 2.3 A resolution suggests a model for ATP-dependent proteolysis
-
Wang, J., Hartling, J.A. & Flanagan, J.M. The structure of ClpP at 2.3 A resolution suggests a model for ATP-dependent proteolysis. Cell 91, 447-456 (1997).
-
(1997)
Cell
, vol.91
, pp. 447-456
-
-
Wang, J.1
Hartling, J.A.2
Flanagan, J.M.3
-
8
-
-
0032469437
-
Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask
-
Wang, J., Hartling, J.A. & Flanagan, J.M. Crystal structure determination of Escherichia coli ClpP starting from an EM-derived mask. J. Struct. Biol. 124, 151-163 (1998).
-
(1998)
J. Struct. Biol.
, vol.124
, pp. 151-163
-
-
Wang, J.1
Hartling, J.A.2
Flanagan, J.M.3
-
9
-
-
0034677361
-
The structures of HsIU and the ATP-dependent protease HsIU- HsIV
-
Bochtler, M. et al. The structures of HsIU and the ATP-dependent protease HsIU- HsIV. Nature 403, 800-805 (2000).
-
(2000)
Nature
, vol.403
, pp. 800-805
-
-
Bochtler, M.1
-
10
-
-
0033766480
-
A gated channel into the proteasome core particle
-
Groll, M. et al. A gated channel into the proteasome core particle. Nat. Struct. Biol. 7, 1062-1067 (2000).
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 1062-1067
-
-
Groll, M.1
-
11
-
-
0033681249
-
Crystal and solution structures of an HslUV protease-chaperone complex
-
Sousa, M.C. et al. Crystal and solution structures of an HslUV protease-chaperone complex. Cell 103, 633-643 (2000).
-
(2000)
Cell
, vol.103
, pp. 633-643
-
-
Sousa, M.C.1
-
12
-
-
0034597824
-
Structural basis for the activation of 20S proteasomes by 11S reg-ulators
-
Whitby, F.G. et al. Structural basis for the activation of 20S proteasomes by 11S reg-ulators. Nature 408, 115-120 (2000).
-
(2000)
Nature
, vol.408
, pp. 115-120
-
-
Whitby, F.G.1
-
13
-
-
0035096082
-
Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism
-
Wang, J. et al. Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism. Structure 9, 177-184 (2001).
-
(2001)
Structure
, vol.9
, pp. 177-184
-
-
Wang, J.1
-
14
-
-
0035211408
-
Structure of Haemophilus influenzae HslV protein at 1.9 A resolution, revealing a cation-binding site near the catalytic site
-
Sousa, M.C. & McKay, D.B. Structure of Haemophilus influenzae HslV protein at 1.9 A resolution, revealing a cation-binding site near the catalytic site. Acta Crystallogr. D 57, 1950-1954 (2001).
-
(2001)
Acta Crystallogr. D
, vol.57
, pp. 1950-1954
-
-
Sousa, M.C.1
McKay, D.B.2
-
15
-
-
0030666224
-
Crystal structure of the 8' subunit of the clamp-loader complex of E. Coli DNA polymerase III
-
Guenther, B., Onrust, R., Sali, A., O'Donnell, M. & Kuriyan, J. Crystal structure of the 8' subunit of the clamp-loader complex of E. coli DNA polymerase III. Cell 91, 335-345 (1997).
-
(1997)
Cell
, vol.91
, pp. 335-345
-
-
Guenther, B.1
Onrust, R.2
Sali, A.3
O'donnell, M.4
Kuriyan, J.5
-
16
-
-
0032969563
-
AAA+: A class of chaperone- like ATPases associated with the assembly, operation, and disassembly of protein complexes
-
Neuwald, A.F., Aravind, L., Spouge, J.L. & Koonin, E.V. AAA+: a class of chaperone- like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res. 9, 27-43 (1999).
-
(1999)
Genome Res
, vol.9
, pp. 27-43
-
-
Neuwald, A.F.1
Aravind, L.2
Spouge, J.L.3
Koonin, E.V.4
-
17
-
-
0035184442
-
Nucleotide-dependent conformational changes in a protease-associ- ated ATPase HsIU
-
Wang, J. et al. Nucleotide-dependent conformational changes in a protease-associ- ated ATPase HsIU. Structure 9, 1107-1116 (2001).
-
(2001)
Structure
, vol.9
, pp. 1107-1116
-
-
Wang, J.1
-
18
-
-
0036308646
-
Crystal structure of HslUV complexed with a vinyl sulfone inhibitor: Corroboration of a proposed mechanism of allosteric activation of HslV by HslU
-
Sousa, M.C., Kessler, B.M., Overkleeft, H.S. & McKay, D.B. Crystal structure of HslUV complexed with a vinyl sulfone inhibitor: corroboration of a proposed mechanism of allosteric activation of HslV by HslU. J. Mol. Biol. 318, 779-785 (2002).
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 779-785
-
-
Sousa, M.C.1
Kessler, B.M.2
Overkleeft, H.S.3
McKay, D.B.4
-
19
-
-
0001588962
-
Purification and characterization of the heat shock proteins HslV and HslU that form a new ATP-dependent protease in Escherichia coli
-
Yoo, S.J. et al. Purification and characterization of the heat shock proteins HslV and HslU that form a new ATP-dependent protease in Escherichia coli. J. Biol. Chem. 271, 14035-14040 (1996).
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 14035-14040
-
-
Yoo, S.J.1
-
20
-
-
0030804951
-
The heat-shock protein HslVU from Escherichia coli is a protein-activated ATPase as well as an ATP-dependent proteinase
-
Seol, J.H. et al. The heat-shock protein HslVU from Escherichia coli is a protein-activated ATPase as well as an ATP-dependent proteinase. Eur. J. Biochem. 247, 1143-1150 (1997).
-
(1997)
Eur. J. Biochem.
, vol.247
, pp. 1143-1150
-
-
Seol, J.H.1
-
21
-
-
0037188514
-
Functional interactions of HslV (ClpQ) with the ATPase HslU (ClpY)
-
Ramachandran, R., Hartmann, C., Song, H.K., Huber, R. & Bochtler, M. Functional interactions of HslV (ClpQ) with the ATPase HslU (ClpY). Proc. Natl. Acad. Sci. USA 99, 7396-7401 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7396-7401
-
-
Ramachandran, R.1
Hartmann, C.2
Song, H.K.3
Huber, R.4
Bochtler, M.5
-
22
-
-
0037135539
-
The C-terminal tails of HslU ATPase act as a molecular switch for activation of HslV peptidase
-
Seong, I.S. et al. The C-terminal tails of HslU ATPase act as a molecular switch for activation of HslV peptidase. J. Biol. Chem. 277, 25976-25982 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 25976-25982
-
-
Seong, I.S.1
-
23
-
-
0032524297
-
Enzymatic and structural similarities between the Escherichia coli ATP-dependent proteases, ClpXP and ClpAP
-
Grimaud, R., Kessel, M., Beuron, F., Steven, A.C. & Maurizi, M. R. Enzymatic and structural similarities between the Escherichia coli ATP-dependent proteases, ClpXP and ClpAP. J. Biol. Chem. 273, 12476-12481 (1998).
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 12476-12481
-
-
Grimaud, R.1
Kessel, M.2
Beuron, F.3
Steven, A.C.4
Maurizi, M.R.5
-
24
-
-
0032215219
-
At sixes and sevens: Characterization of the symmetry mismatch of the ClpAP chaperone-assisted protease
-
Beuron, F. et al. At sixes and sevens: characterization of the symmetry mismatch of the ClpAP chaperone-assisted protease. J. Struct. Biol. 123, 248-259 (1998).
-
(1998)
J. Struct. Biol.
, vol.123
, pp. 248-259
-
-
Beuron, F.1
-
25
-
-
0034502532
-
Visualization of substrate binding and translocation by the ATP-dependent protease, ClpXP
-
Ortega, J., Singh, S.K., Ishikawa, T., Maurizi, M.R. & Steven, A.C. Visualization of substrate binding and translocation by the ATP-dependent protease, ClpXP. Mol. Cell 6, 1515-1521 (2000).
-
(2000)
Mol. Cell
, vol.6
, pp. 1515-1521
-
-
Ortega, J.1
Singh, S.K.2
Ishikawa, T.3
Maurizi, M.R.4
Steven, A.C.5
-
26
-
-
0035122947
-
Molecular determinants of complex formation between Clp/Hsp100 ATPases and the ClpP peptidase
-
Kim, Y.I. et al. Molecular determinants of complex formation between Clp/Hsp100 ATPases and the ClpP peptidase. Nat. Struct. Biol. 8, 230-233 (2001).
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 230-233
-
-
Kim, Y.I.1
-
27
-
-
0035800729
-
Functional domains of the ClpA and ClpX molecular chaperones identified by limited proteolysis and deletion analysis
-
Singh, S.K. et al. Functional domains of the ClpA and ClpX molecular chaperones identified by limited proteolysis and deletion analysis. J. Biol. Chem. 276, 29420-29429 (2001).
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 29420-29429
-
-
Singh, S.K.1
-
28
-
-
0037195418
-
Crystal structure of ClpA, an Hsp100 chap- erone and regulator of ClpAP protease
-
Guo, F., Maurizi, M.R., Esser, L. & Xia, D. Crystal structure of ClpA, an Hsp100 chap- erone and regulator of ClpAP protease. J. Biol. Chem. 277, 46743-46752 (2002).
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 46743-46752
-
-
Guo, F.1
Maurizi, M.R.2
Esser, L.3
Xia, D.4
-
29
-
-
0348010311
-
Crystal structure of ClpX molecular chaperone from Helicobacter pylori
-
Kim, D.Y. & Kim, K.K. Crystal structure of ClpX molecular chaperone from Helicobacter pylori. J. Biol. Chem. 278, 50664-50670 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 50664-50670
-
-
Kim, D.Y.1
Kim, K.K.2
-
30
-
-
0028365133
-
Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli. Requirement for the multiple array of active sites in ClpP but not ATP hydrolysis
-
Thompson, M.W., Singh, S.K. & Maurizi, M.R. Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli. Requirement for the multiple array of active sites in ClpP but not ATP hydrolysis. J. Biol. Chem. 269, 18209-18215 (1994).
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 18209-18215
-
-
Thompson, M.W.1
Singh, S.K.2
Maurizi, M.R.3
-
31
-
-
0033638255
-
Dynamics of substrate denaturation and translocation by the ClpXP degradation machine
-
Kim, Y.I., Burton, R.E., Burton, B.M., Sauer, R.T. & Baker, T.A. Dynamics of substrate denaturation and translocation by the ClpXP degradation machine. Mol. Cell 5, 639-648 (2000).
-
(2000)
Mol. Cell
, vol.5
, pp. 639-648
-
-
Kim, Y.I.1
Burton, R.E.2
Burton, B.M.3
Sauer, R.T.4
Baker, T.A.5
-
32
-
-
0023906054
-
Protease Ti, a new ATP-depen- dent protease in Escherichia coli, contains protein-activated ATPase and proteolytic functions in distinct subunits
-
Hwang, B.J., Woo, K.M., Goldberg, A.L. & Chung, C.H. Protease Ti, a new ATP-depen- dent protease in Escherichia coli, contains protein-activated ATPase and proteolytic functions in distinct subunits. J. Biol. Chem. 263, 8727-8734 (1988).
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 8727-8734
-
-
Hwang, B.J.1
Woo, K.M.2
Goldberg, A.L.3
Chung, C.H.4
-
33
-
-
0032079329
-
The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system
-
Gottesman, S., Roche, E., Zhou, Y. & Sauer, R.T. The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system. Genes Dev. 12, 1338-1347 (1998).
-
(1998)
Genes Dev
, vol.12
, pp. 1338-1347
-
-
Gottesman, S.1
Roche, E.2
Zhou, Y.3
Sauer, R.T.4
-
34
-
-
0034254908
-
Unfolding and internalization of proteins by the ATP-dependent proteases ClpXP and ClpAP
-
Singh, S.K., Grimaud, R., Hoskins, J.R., Wickner, S. & Maurizi, M.R. Unfolding and internalization of proteins by the ATP-dependent proteases ClpXP and ClpAP. Proc. Natl. Acad. Sci. USA 97, 8898-8903 (2000).
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 8898-8903
-
-
Singh, S.K.1
Grimaud, R.2
Hoskins, J.R.3
Wickner, S.4
Maurizi, M.R.5
-
35
-
-
0042329502
-
Linkage between ATP consumption and mechanical unfolding during the protein processing reactions of an AAA+ degradation machine
-
Kenniston, J.A., Baker, T.A., Fernandez, J.M. & Sauer, R.T. Linkage between ATP consumption and mechanical unfolding during the protein processing reactions of an AAA+ degradation machine. Cell 114, 511-520 (2003).
-
(2003)
Cell
, vol.114
, pp. 511-520
-
-
Kenniston, J.A.1
Baker, T.A.2
Fernandez, J.M.3
Sauer, R.T.4
-
36
-
-
0036848756
-
Characterization of a specificity factor for an AAA+ ATPase. Assembly of SspB dimers with ssrA-tagged proteins and the ClpX hexamer
-
Wah, D.A., Levchenko, I., Baker, T.A. & Sauer, R.T. Characterization of a specificity factor for an AAA+ ATPase. Assembly of SspB dimers with ssrA-tagged proteins and the ClpX hexamer. Chem. Biol. 9, 1237-1245 (2002).
-
(2002)
Chem. Biol.
, vol.9
, pp. 1237-1245
-
-
Wah, D.A.1
Levchenko, I.2
Baker, T.A.3
Sauer, R.T.4
-
37
-
-
1242289869
-
The N-terminal zinc binding domain of ClpX is a dimerization domain that modulates the chaperone function
-
Wojtyra, U.A., Thibault, G., Tuite, A. & Houry, W.A. The N-terminal zinc binding domain of ClpX is a dimerization domain that modulates the chaperone function. J. Biol. Chem. 278, 48981-48990 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 48981-48990
-
-
Wojtyra, U.A.1
Thibault, G.2
Tuite, A.3
Houry, W.A.4
-
38
-
-
0037351068
-
Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signals
-
Flynn, J.M., Neher, S.B., Kim, Y.I., Sauer, R.T. & Baker, T.A. Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signals. Mol. Cell 11, 671-683 (2003).
-
(2003)
Mol. Cell
, vol.11
, pp. 671-683
-
-
Flynn, J.M.1
Neher, S.B.2
Kim, Y.I.3
Sauer, R.T.4
Baker, T.A.5
-
39
-
-
0345269855
-
C-terminal domain mutations in ClpX uncouple substrate binding from an engagement step required for unfolding
-
Joshi, S.A., Baker, T.A. & Sauer, R.T. C-terminal domain mutations in ClpX uncouple substrate binding from an engagement step required for unfolding. Mol. Microbiol. 48, 67-76 (2003).
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 67-76
-
-
Joshi, S.A.1
Baker, T.A.2
Sauer, R.T.3
-
40
-
-
0037407940
-
Energy-dependent degradation: Linkage between ClpX-catalyzed nucleotide hydrolysis and protein-substrate processing
-
Burton, R.E., Baker, T.A. & Sauer, R.T. Energy-dependent degradation: linkage between ClpX-catalyzed nucleotide hydrolysis and protein-substrate processing. Protein Sci. 12, 893-902 (2003).
-
(2003)
Protein Sci
, vol.12
, pp. 893-902
-
-
Burton, R.E.1
Baker, T.A.2
Sauer, R.T.3
-
41
-
-
0033539690
-
ClpA and ClpP remain associated during multi-ple rounds of ATP-dependent protein degradation by ClpAP protease
-
Singh, S.K., Guo, F. & Maurizi, M.R. ClpA and ClpP remain associated during multi-ple rounds of ATP-dependent protein degradation by ClpAP protease. Biochemistry 38, 14906-14915 (1999).
-
(1999)
Biochemistry
, vol.38
, pp. 14906-14915
-
-
Singh, S.K.1
Guo, F.2
Maurizi, M.R.3
-
42
-
-
0037119954
-
Alternating translocation of pro-tein substrates from both ends of ClpXP protease
-
Ortega, J., Lee, H.S., Maurizi, M.R. & Steven, A.C. Alternating translocation of pro-tein substrates from both ends of ClpXP protease. EMBO J. 21, 4938-4949 (2002).
-
(2002)
EMBO J
, vol.21
, pp. 4938-4949
-
-
Ortega, J.1
Lee, H.S.2
Maurizi, M.R.3
Steven, A.C.4
-
43
-
-
0028863006
-
Disassembly of the Mu transposase tetramer by the ClpX chaperone
-
Levchenko, I., Luo, L. & Baker, T.A. Disassembly of the Mu transposase tetramer by the ClpX chaperone. Genes Dev. 9, 2399-2408 (1995).
-
(1995)
Genes Dev
, vol.9
, pp. 2399-2408
-
-
Levchenko, I.1
Luo, L.2
Baker, T.A.3
-
44
-
-
0030908043
-
ClpX and MuB interact with overlapping regions of Mu transposase: Implications for control of the transposition pathway
-
Levchenko, I., Yamauchi, M. & Baker, T.A. ClpX and MuB interact with overlapping regions of Mu transposase: implications for control of the transposition pathway. Genes Dev. 11, 1561-1572 (1997).
-
(1997)
Genes Dev
, vol.11
, pp. 1561-1572
-
-
Levchenko, I.1
Yamauchi, M.2
Baker, T.A.3
-
45
-
-
0003760238
-
Enzyme Kinetics: Behavior and Analysis of Rapid Equilibrium and Steady-State Enzyme Systems
-
Wiley Classics Library edn, Wiley, New York
-
Segel, I. H. Enzyme Kinetics: Behavior and Analysis of Rapid Equilibrium and Steady-State Enzyme Systems (Wiley Classics Library edn) 72-74 (Wiley, New York, 1993).
-
(1993)
, pp. 72-74
-
-
Segel, I.H.1
-
46
-
-
0028114256
-
Halothane and cyclopiazonic acid modu-late Ca-ATPase oligomeric state and function in sarcoplasmic reticulum
-
Karon, B.S., Mahaney, J.E. & Thomas, D.D. Halothane and cyclopiazonic acid modu-late Ca-ATPase oligomeric state and function in sarcoplasmic reticulum. Biochemistry 33, 13928-13937 (1994).
-
(1994)
Biochemistry
, vol.33
, pp. 13928-13937
-
-
Karon, B.S.1
Mahaney, J.E.2
Thomas, D.D.3
|