메뉴 건너뛰기




Volumn 53, Issue 2, 2004, Pages 265-277

The importance of proper model assumption in bayesian phylogenetics

Author keywords

Bayesian phylogenetic inference; Convergence; Markov chain Monte Carlo; Maximum likelihood; Model choice; Posterior probability

Indexed keywords

ARTICLE; BAYES THEOREM; BIOLOGICAL MODEL; COMPARATIVE STUDY; COMPUTER SIMULATION; METHODOLOGY; MOLECULAR EVOLUTION; PHYLOGENY; STATISTICAL MODEL;

EID: 2442581218     PISSN: 10635157     EISSN: None     Source Type: Journal    
DOI: 10.1080/10635150490423520     Document Type: Article
Times cited : (253)

References (58)
  • 1
    • 0016355478 scopus 로고
    • A new look at statistical model identification
    • Akaike, H. 1974. A new look at statistical model identification. IEEE Trans. Automatic. Control. 19:716-723.
    • (1974) IEEE Trans. Automatic. Control. , vol.19 , pp. 716-723
    • Akaike, H.1
  • 2
    • 0037329391 scopus 로고    scopus 로고
    • Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence
    • Alfaro, M. E., S. Zoller, and F. Lutzoni. 2003. Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence. Mol. Biol. Evol. 20:255-266.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 255-266
    • Alfaro, M.E.1    Zoller, S.2    Lutzoni, F.3
  • 3
    • 84948755297 scopus 로고    scopus 로고
    • Case Study: Visualizing sets of evolutionary trees
    • Amenta, N., and J. Klinger. 2002. Case Study: Visualizing sets of evolutionary trees. Pages 71-74 in IEEE symposium on Information Visualization. Available at http://csdl.computer.org/ comp/proceedings/infovis/2002/1751/00/ 175/toc.htm.
    • (2002) IEEE Symposium on Information Visualization , pp. 71-74
    • Amenta, N.1    Klinger, J.2
  • 4
    • 0035986890 scopus 로고    scopus 로고
    • Bayesian model adequacy and choice in phylogenetics
    • Bollback, J. P. 2002. Bayesian model adequacy and choice in phylogenetics. Mol. Biol. Evol. 19:1171-1180.
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 1171-1180
    • Bollback, J.P.1
  • 5
    • 0042069655 scopus 로고    scopus 로고
    • Comparing bootstrap and posterior probability values in the four-taxon case
    • Cummings, M. P., S. A. Handley, D. S. Myers, D. L. Reed, A. Rokas, and K. Winka. 2003. Comparing bootstrap and posterior probability values in the four-taxon case. Syst. Biol. 52:477-487.
    • (2003) Syst. Biol. , vol.52 , pp. 477-487
    • Cummings, M.P.1    Handley, S.A.2    Myers, D.S.3    Reed, D.L.4    Rokas, A.5    Winka, K.6
  • 6
    • 0031713421 scopus 로고    scopus 로고
    • Best-fit maximum-likelihood models for phylogenetic inference: Empirical tests with known phylogenies
    • Cunningham, C. W., H. Zhu, and D. M. Hillis. 1998. Best-fit maximum-likelihood models for phylogenetic inference: Empirical tests with known phylogenies. Evolution 52:978-987.
    • (1998) Evolution , vol.52 , pp. 978-987
    • Cunningham, C.W.1    Zhu, H.2    Hillis, D.M.3
  • 7
    • 0037329108 scopus 로고    scopus 로고
    • Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability
    • Douady, C. J., F. Delsuc, Y. Boucher, W. F. Doolittle, and E. J. P. Douzery. 2003. Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability. Mol. Biol. Evol. 20:248-254.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 248-254
    • Douady, C.J.1    Delsuc, F.2    Boucher, Y.3    Doolittle, W.F.4    Douzery, E.J.P.5
  • 8
    • 0242487486 scopus 로고    scopus 로고
    • The reliability of Bayesian posterior probabilities and bootstrap frequencies in phylogenetics
    • Erixon, P., B. Svennblad, T. Britton, and B. Oxelman. 2003. The reliability of Bayesian posterior probabilities and bootstrap frequencies in phylogenetics. Syst. Biol. 52:665-673.
    • (2003) Syst. Biol. , vol.52 , pp. 665-673
    • Erixon, P.1    Svennblad, B.2    Britton, T.3    Oxelman, B.4
  • 9
    • 84959798530 scopus 로고
    • Cases in which parsimony or compatibility methods will be positively misleading
    • Felsenstein, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27:401-410.
    • (1978) Syst. Zool. , vol.27 , pp. 401-410
    • Felsenstein, J.1
  • 10
    • 0030034795 scopus 로고    scopus 로고
    • A hidden Markov model approach to variation among sites in rate of evolution
    • Felsenstein, J., and G. A. Churchill. 1996. A hidden Markov model approach to variation among sites in rate of evolution. Mol. Biol. Evol. 13:93-104.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 93-104
    • Felsenstein, J.1    Churchill, G.A.2
  • 11
    • 0031829758 scopus 로고    scopus 로고
    • Inferring pattern and process: Maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis
    • Galtier, N., and M. Gouy. 1998. Inferring pattern and process: Maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis. Mol. Biol. Evol. 15:871-879.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 871-879
    • Galtier, N.1    Gouy, M.2
  • 12
    • 0028887457 scopus 로고
    • Success of maximum likelihood phylogeny inference in the four-taxon case
    • Gaut, B. S., and P. O. Lewis. 1995. Success of maximum likelihood phylogeny inference in the four-taxon case. Mol. Biol. Evol. 12:152-162.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 152-162
    • Gaut, B.S.1    Lewis, P.O.2
  • 13
    • 0021003230 scopus 로고
    • Estimates of DNA and protein sequence divergence: An examination of some assumptions
    • Golding, G. B. 1983. Estimates of DNA and protein sequence divergence: An examination of some assumptions. Mol. Biol. Evol. 1:125-142.
    • (1983) Mol. Biol. Evol. , vol.1 , pp. 125-142
    • Golding, G.B.1
  • 14
    • 0027526039 scopus 로고
    • Statistical tests of models of DNA substitution
    • Goldman, N. 1993. Statistical tests of models of DNA substitution. J. Mol. Evol. 36:182-198.
    • (1993) J. Mol. Evol. , vol.36 , pp. 182-198
    • Goldman, N.1
  • 15
    • 0028168856 scopus 로고
    • Codon-based model of nucleotide substitution for protein-coding DNA sequences
    • Goldman, N., and Z. H. Yang. 1994. Codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol. Biol. Evol. 11:725-736.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.H.2
  • 16
    • 0029068893 scopus 로고
    • Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites
    • Gu, X., Y.-X. Fu, and W.-H. Li. 1995. Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites. Mol. Biol. Evol. 12:546-557.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 546-557
    • Gu, X.1    Fu, Y.-X.2    Li, W.-H.3
  • 17
    • 0031875569 scopus 로고    scopus 로고
    • Evolutionary distances for protein-coding sequences: Modeling site-specific residue frequencies
    • Halpern, A. L., and W. J. Bruno. 1998. Evolutionary distances for protein-coding sequences: Modeling site-specific residue frequencies. Mol. Biol. Evol. 15:910-917.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 910-917
    • Halpern, A.L.1    Bruno, W.J.2
  • 18
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., H. Kishino, and T. Yano. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 20
    • 12044255023 scopus 로고
    • Success of phylogenetic methods in the four-taxon case
    • Huelsenbeck, J. P., and D. M. Hillis. 1993. Success of phylogenetic methods in the four-taxon case. Syst. Biol. 42:247-264.
    • (1993) Syst. Biol. , vol.42 , pp. 247-264
    • Huelsenbeck, J.P.1    Hillis, D.M.2
  • 21
    • 0036806280 scopus 로고    scopus 로고
    • Potential applications and pitfalls of Bayesian inference of phylogeny
    • Huelsenbeck, J. P., B. Larget, R. E. Miller, and F. Ronquist. 2002. Potential applications and pitfalls of Bayesian inference of phylogeny. Syst. Biol. 51:673-688.
    • (2002) Syst. Biol. , vol.51 , pp. 673-688
    • Huelsenbeck, J.P.1    Larget, B.2    Miller, R.E.3    Ronquist, F.4
  • 22
    • 0034077901 scopus 로고    scopus 로고
    • A compound Poisson process for relaxing the molecular clock
    • Huelsenbeck, J. P., B. Larget, and D. Swofford. 2000. A compound Poisson process for relaxing the molecular clock. Genetics 154:1879-1892.
    • (2000) Genetics , vol.154 , pp. 1879-1892
    • Huelsenbeck, J.P.1    Larget, B.2    Swofford, D.3
  • 23
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J. P., and F. Ronquist. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 24
    • 0035861456 scopus 로고    scopus 로고
    • Bayesian inference of phylogeny and its impact on evolutionary biology
    • Huelsenbeck, J. P., F. Ronquist, R. Nielsen, and J. P. Bollback. 2001. Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294:2310-2314.
    • (2001) Science , vol.294 , pp. 2310-2314
    • Huelsenbeck, J.P.1    Ronquist, F.2    Nielsen, R.3    Bollback, J.P.4
  • 25
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • (H. N. Munro, ed.). Academic Press, New York
    • Jukes, T. H., and C. R. Cantor. 1969. Evolution of protein molecules. Pages 21-132 in Mammalian protein metabolism (H. N. Munro, ed.). Academic Press, New York.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 26
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 27
    • 0035103260 scopus 로고    scopus 로고
    • Performance of a divergence time estimation method under a probabilistic model of rate evolution
    • Kishino, H., J. L. Thorne, and W. J. Bruno. 2001. Performance of a divergence time estimation method under a probabilistic model of rate evolution. Mol. Biol. Evol. 18:352-361.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 352-361
    • Kishino, H.1    Thorne, J.L.2    Bruno, W.J.3
  • 28
    • 0028177080 scopus 로고
    • A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates
    • Kuhner, M. K., and J. Felsenstein. 1994. A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates. Mol. Biol. Evol. 11:459-468.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 459-468
    • Kuhner, M.K.1    Felsenstein, J.2
  • 29
    • 0021277009 scopus 로고
    • A new method for calculating evolutionary substitution rates
    • Lanave, C., G. Preparata, C. Saccone, and G. Serio. 1984. A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20:86-93.
    • (1984) J. Mol. Evol. , vol.20 , pp. 86-93
    • Lanave, C.1    Preparata, G.2    Saccone, C.3    Serio, G.4
  • 30
    • 0036679128 scopus 로고    scopus 로고
    • The metapopulation genetic algorithm: An efficient solution for the problem of large phylogeny estimation
    • Lemmon, A. R., and M. C. Milinkovitch. 2002. The metapopulation genetic algorithm: An efficient solution for the problem of large phylogeny estimation. Proc. Natl. Acad. Sci. USA 99:10516-10521.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 10516-10521
    • Lemmon, A.R.1    Milinkovitch, M.C.2
  • 31
    • 0029935637 scopus 로고    scopus 로고
    • Evolution of chlorophyll and bacteriochlorophyll: The problem of invariant sites in sequence analysis
    • Lockhart, P. J., A. W. D. Larkum, M. A. Steel, P. J. Waddell, and D. Penny. 1996. Evolution of chlorophyll and bacteriochlorophyll: The problem of invariant sites in sequence analysis. Proc. Natl. Acad. Sci. USA 93:1930-1934.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 1930-1934
    • Lockhart, P.J.1    Larkum, A.W.D.2    Steel, M.A.3    Waddell, P.J.4    Penny, D.5
  • 32
    • 0028361182 scopus 로고
    • Recovering evolutionary trees under a more realistic model of sequence evolution
    • Lockhart, P. J., M. A. Steel, M. D. Hendy, and D. Penny. 1994. Recovering evolutionary trees under a more realistic model of sequence evolution. Mol. Biol. Evol. 11:605-612.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 605-612
    • Lockhart, P.J.1    Steel, M.A.2    Hendy, M.D.3    Penny, D.4
  • 34
    • 0035057511 scopus 로고    scopus 로고
    • Models of sequence evolution for DNA sequences containing gaps
    • McGuire, G., M. C. Denham, and D. J. Balding. 2001. Models of sequence evolution for DNA sequences containing gaps. Mol. Biol. Evol. 18:481-490.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 481-490
    • McGuire, G.1    Denham, M.C.2    Balding, D.J.3
  • 35
    • 0242487488 scopus 로고    scopus 로고
    • Performance-based selection of likelihood models for phylogeny estimation
    • Minin, V., Z. Abdo, P. Joyce, and J. Sullivan. 2003. Performance-based selection of likelihood models for phylogeny estimation. Syst. Biol. 52:674-683.
    • (2003) Syst. Biol. , vol.52 , pp. 674-683
    • Minin, V.1    Abdo, Z.2    Joyce, P.3    Sullivan, J.4
  • 36
    • 0842331077 scopus 로고    scopus 로고
    • Phylogenetic relationships of North American chorus frogs (Pseudacris)
    • Moriarty, E. C., and D. C. Cannatella. 2004. Phylogenetic relationships of North American chorus frogs (Pseudacris). Mol. Phylogenet Evol. 30:409-442.
    • (2004) Mol. Phylogenet Evol. , vol.30 , pp. 409-442
    • Moriarty, E.C.1    Cannatella, D.C.2
  • 37
    • 0028900996 scopus 로고
    • Evolutionary analyses of DNA sequences subject to constraints on secondary structure
    • Muse, S. V. 1995. Evolutionary analyses of DNA sequences subject to constraints on secondary structure. Genetics 139:1429-1439.
    • (1995) Genetics , vol.139 , pp. 1429-1439
    • Muse, S.V.1
  • 38
    • 0028024626 scopus 로고
    • A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome
    • Muse, S. V., and B. S. Gaut. 1994. A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome. Mol. Biol. Evol. 11:715-724.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 715-724
    • Muse, S.V.1    Gaut, B.S.2
  • 39
    • 0031972161 scopus 로고    scopus 로고
    • Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
    • Nielsen, R., and Z. Yang. 1998. Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene. Genetics 148:929-936.
    • (1998) Genetics , vol.148 , pp. 929-936
    • Nielsen, R.1    Yang, Z.2
  • 40
    • 0035527410 scopus 로고    scopus 로고
    • Selecting the best-fit model of nucleotide substitution
    • Posada, D., and K. A. Crandall. 2001. Selecting the best-fit model of nucleotide substitution. Syst. Biol. 50:580-601.
    • (2001) Syst. Biol. , vol.50 , pp. 580-601
    • Posada, D.1    Crandall, K.A.2
  • 41
    • 0030928378 scopus 로고    scopus 로고
    • Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
    • Rambaut, A., and N. C. Grassly. 1997. Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Comput. Appl. Biosci. 13:235-238.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 235-238
    • Rambaut, A.1    Grassly, N.C.2
  • 42
    • 0019424782 scopus 로고
    • Comparison of phylogenetic trees
    • Robinson, D. F., and L. R. Foulds. 1981. Comparison of phylogenetic trees. Math. Biosci. 53:131-147.
    • (1981) Math. Biosci. , vol.53 , pp. 131-147
    • Robinson, D.F.1    Foulds, L.R.2
  • 43
  • 44
    • 0030773749 scopus 로고    scopus 로고
    • A nonparametric approach to estimating divergence times in the absence of rate constancy
    • Sanderson, M. J. 1997. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 14:1218-1231.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 1218-1231
    • Sanderson, M.J.1
  • 45
    • 0000120766 scopus 로고
    • Estimating the dimension of a model
    • Schwarz, G. 1974. Estimating the dimension of a model. Ann. Stat. 6:461-464.
    • (1974) Ann. Stat. , vol.6 , pp. 461-464
    • Schwarz, G.1
  • 46
    • 0001212293 scopus 로고
    • A complete family of phylogenetic invariants for any number of taxa under Kimura's 3ST model
    • Steel, M., P. J. L. Székely, P. L. Erdös, and P. J. Waddell. 1993. A complete family of phylogenetic invariants for any number of taxa under Kimura's 3ST model. N. Z. J. Bot. 31:289-296.
    • (1993) N. Z. J. Bot. , vol.31 , pp. 289-296
    • Steel, M.1    Székely, P.J.L.2    Erdös, P.L.3    Waddell, P.J.4
  • 47
    • 0028807391 scopus 로고
    • Among-site rate variation and phylogenetic analysis of 12S rRNA in sigmodontine rodents
    • Sullivan, J., K. E. Holsinger, and C. Simon. 1995. Among-site rate variation and phylogenetic analysis of 12S rRNA in sigmodontine rodents. Mol. Biol. Evol. 12:988-1001.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 988-1001
    • Sullivan, J.1    Holsinger, K.E.2    Simon, C.3
  • 48
    • 0035527373 scopus 로고    scopus 로고
    • Should we use model-based methods for phylogenetic inference when we know that assumptions about among-site rate variation and nucleotide substitution pattern are violated?
    • Sullivan, J., and D. L. Swofford. 2001. Should we use model-based methods for phylogenetic inference when we know that assumptions about among-site rate variation and nucleotide substitution pattern are violated? Syst. Biol. 50:723-729.
    • (2001) Syst. Biol. , vol.50 , pp. 723-729
    • Sullivan, J.1    Swofford, D.L.2
  • 49
    • 0037058983 scopus 로고    scopus 로고
    • Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics
    • Suzuki, Y., G. V. Glazko, and M. Nei. 2002. Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics. Proc. Natl. Acad. Sci. USA 99:16138-16143.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 16138-16143
    • Suzuki, Y.1    Glazko, G.V.2    Nei, M.3
  • 50
    • 0035527406 scopus 로고    scopus 로고
    • Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods
    • Swofford, D. L., P. J. Waddell, J. P. Huelsenbeck, P. G. Foster, P. O. Lewis, and J. S. Rogers. 2001. Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods. Syst. Biol. 50:525-539.
    • (2001) Syst. Biol. , vol.50 , pp. 525-539
    • Swofford, D.L.1    Waddell, P.J.2    Huelsenbeck, J.P.3    Foster, P.G.4    Lewis, P.O.5    Rogers, J.S.6
  • 51
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems on the analysis of DNA sequences
    • Tavaré, S. 1986. Some probabilistic and statistical problems on the analysis of DNA sequences. Lect. Math. Life Sci. 17:57-86.
    • (1986) Lect. Math. Life Sci. , vol.17 , pp. 57-86
    • Tavaré, S.1
  • 52
    • 0031741182 scopus 로고    scopus 로고
    • Estimating the rate of evolution of the rate of molecular evolution
    • Thorne, J. L., H. Kishino, and I. S. Painter. 1998. Estimating the rate of evolution of the rate of molecular evolution. Mol. Biol. Evol. 15:1647-1657.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1647-1657
    • Thorne, J.L.1    Kishino, H.2    Painter, I.S.3
  • 53
    • 0031894830 scopus 로고    scopus 로고
    • High apparent rate of simultaneous compensatory base-pair substitutions in ribosomal RNA
    • Tillier, E. R. M., and R. A. Collins. 1998. High apparent rate of simultaneous compensatory base-pair substitutions in ribosomal RNA. Genetics 148:1993-2002.
    • (1998) Genetics , vol.148 , pp. 1993-2002
    • Tillier, E.R.M.1    Collins, R.A.2
  • 54
    • 0002574561 scopus 로고    scopus 로고
    • Evolutionary trees of apes and humans from DNA sequences
    • (A. J. Lock and C. R. Peters, eds.). Clarendon Press, Oxford, U.K.
    • Waddell, P., and D. Penny. 1996. Evolutionary trees of apes and humans from DNA sequences. Pages 53-73 in Handbook of symbolic evolution (A. J. Lock and C. R. Peters, eds.). Clarendon Press, Oxford, U.K.
    • (1996) Handbook of Symbolic Evolution , pp. 53-73
    • Waddell, P.1    Penny, D.2
  • 55
    • 0036431235 scopus 로고    scopus 로고
    • Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support
    • Wilcox, T. P., D. J. Zwickl, T. A. Heath, and D. M. Hillis. 2002. Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support. Mol. Phylogenet. Evol. 25:361-371.
    • (2002) Mol. Phylogenet. Evol. , vol.25 , pp. 361-371
    • Wilcox, T.P.1    Zwickl, D.J.2    Heath, T.A.3    Hillis, D.M.4
  • 56
    • 0027132974 scopus 로고
    • Maximum likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites
    • Yang, Z. 1993. Maximum likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Mol. Biol. Evol. 10:1396-1401.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 1396-1401
    • Yang, Z.1
  • 57
    • 0028267146 scopus 로고
    • Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation
    • Yang, Z., N. Goldman, and A. Friday. 1994. Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. Mol. Biol. Evol. 11:316-324.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 316-324
    • Yang, Z.1    Goldman, N.2    Friday, A.3
  • 58
    • 0004252445 scopus 로고    scopus 로고
    • Prentice-Hall, Englewood Cliffs, New Jersey
    • Zar, J. H. 1999. Biostatistical analysis. Prentice-Hall, Englewood Cliffs, New Jersey.
    • (1999) Biostatistical Analysis
    • Zar, J.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.