Rapid method for quantifying the extent of methionine oxidation in intact calmodulin

Journal of the American Society for Mass Spectrometry

Volumn 16, Issue 9, 2005, Pages 1470-1480

  Galeva, Nadezhda A ^a   Esch, S Wynn ^a   Williams, Todd D ^a   Lye, Meng Markille ^b   Squier, Thomas C ^b  

^a UNIVERSITY OF KANSAS   (United States)

^b PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALMODULIN; ELECTROSPRAY IONIZATION; METHIONINE OXIDATION; PROTEIN-COLLISION;

DISSOCIATION; HYDROGEN PEROXIDE; IONIZATION; IONS; MASS SPECTROMETRY; PROTEINS; REDUCTION; SULFUR;

OXIDATION;

CALMODULIN; HYDROGEN PEROXIDE; METHIONINE; PEROXYNITRITE; SULFOXIDE;

ANALYTIC METHOD; ARTICLE; CARBOXY TERMINAL SEQUENCE; CHEMICAL MODIFICATION; CHEMICAL REACTION; COLLISIONALLY ACTIVATED DISSOCIATION; ELECTROSPRAY MASS SPECTROMETRY; OXIDATION; QUANTITATIVE ANALYSIS; REACTION ANALYSIS; STEREOISOMERISM;

ALGORITHMS; AMINO ACID SUBSTITUTION; CALMODULIN; METHIONINE; OXIDATION-REDUCTION; PEPTIDE MAPPING; SEQUENCE ANALYSIS, PROTEIN; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TIME FACTORS;

EID: 23844470201     PISSN: 10440305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jasms.2005.04.009     Document Type: Article

References (46)

1. G.E. Reid, S.A. McLuckey "Top down" protein characterization via tandem mass spectrometry J. Mass Spectrom. 37 2002 663 675
2. J.L. Stephenson, S.A. McLuckey, G.E. Reid, J.M. Wells, J.L. Bundy Ion/ion chemistry as a top-down approach for protein analysis Curr. Opin. Biotechnol. 13 2002 57 64
3. N.L. Kelleher, S.V. Taylor, D. Grannis, C. Kinsland, H.J. Chiu, T.P. Begley, F.W. McLafferty Efficient sequence analysis of the six gene products (7-74 kDa) from the Escherichia coli thiamin biosynthetic operon by tandem high-resolution mass spectrometry Protein Sci. 7 1998 1796 1801
4. J.F. Nemeth-Cawley, J.C. Rouse Identification and sequencing analysis of intact proteins via collision-induced dissociation and quadrupole time-of-flight mass spectrometry J. Mass Spectrom. 37 2002 270 282
5. J.F. Nemeth-Cawley, B.S. Tangarone, J.C. Rouse "Top Down" characterization is a complementary technique to peptide sequencing for identifying protein species in complex mixtures J. Proteome Res. 2 2003 495 505
6. G.E. Reid, H. Shang, J.M. Hogan, G.U. Lee, S.A. McLuckey Gas-phase concentration, purification, and identification of whole proteins from complex mixtures J. Am. Chem. Soc. 124 2002 7353 7362
7. M. Thevis, R.R. Loo, J.A. Loo Mass spectrometric characterization of transferrins and their fragments derived by reduction of disulfide bonds J. Am. Soc. Mass Spectrom. 14 2003 635 647
8. G.E. Reid, J.L. Stephenson Jr., S.A. McLuckey Tandem mass spectrometry of ribonuclease A and B N-linked glycosylation site analysis of whole protein ions Anal. Chem. 74 2002 577 583
9. N. Zhou, T. Yuan, A.S. Mak, H.J. Vogel NMR studies of caldesmon-calmodulin interactions Biochemistry 36 1997 2817 2825
10. R.A. Edwards, M.P. Walsh, C. Sutherland, H.J. Vogel Activation of calcineurin and smooth muscle myosin light chain kinase by Met-to-Leu mutants of calmodulin Biochem. J. (Part 1) 331 1998 149 152
11. S.W. Vetter, E. Leclerc Novel aspects of calmodulin target recognition and activation Eur. J Biochem 270 2003 404 414
12. Y. Yao, T.C. Squier Variable conformation and dynamics of calmodulin complexed with peptides derived from the autoinhibitory domains of target proteins Biochemistry 35 1996 6815 6827
13. E. Carafoli, E. Garcia-Martin, D. Guerini The plasma membrane calcium pump Recent developments and future perspectives Experientia 52 1996 1091 1100
14. E.E. Strehler, D.A. Zacharias Role of alternative splicing in generating isoform diversity among plasma membrane calcium pumps Physiol. Rev. 81 2001 21 50
15. J. Lehotsky Plasma membrane Ca(2+)-pump functional specialization in the brain. Complex of isoform expression and regulation by effectors Mol. Chem. Neuropathol. 25 1995 175 187
16. D. Guerini, J. Krebs, E. Carafoli Stimulation of the purified erythrocyte Ca2+-ATPase by tryptic fragments of calmodulin J. Biol. Chem. 259 1984 15172 15177
17. B. Elshorst, M. Hennig, H. Forsterling, A. Diener, M. Maurer, P. Schulte, H. Schwalbe, C. Griesinger, J. Krebs, H. Schmid, T. Vorherr, E. Carafoli NMR solution structure of a complex of calmodulin with a binding peptide of the Ca2+ pump Biochemistry 38 1999 12320 12332
18. Y. Yao, J. Gao, T.C. Squier Dynamic structure of the calmodulin-binding domain of the plasma membrane Ca-ATPase in native erythrocyte ghost membranes Biochemistry 35 1996 12015 12028
19. H. Sun, T.C. Squier Ordered and cooperative binding of opposing globular domains of calmodulin to the plasma membrane Ca-ATPase J. Biol. Chem. 275 2000 1731 1738
20. T.C. Squier Oxidative stress and protein aggregation during biological aging Exp. Gerontol. 36 2001 1539 1550
21. M.L. Michaelis, D.J. Bigelow, C. Schoneich, T.D. Williams, L. Ramonda, D. Yin, A.F. Huhmer, Y. Yao, J. Gao, T.C. Squier Decreased plasma membrane calcium transport activity in aging brain Life Sci. 59 1996 405 412
22. J. Gao, D. Yin, Y. Yao, T.D. Williams, T.C. Squier Progressive decline in the ability of calmodulin isolated from aged brain to activate the plasma membrane Ca-ATPase Biochemistry 37 1998 9536 9548
23. J. Gao, Y. Yao, T.C. Squier Oxidatively modified calmodulin binds to the plasma membrane Ca-ATPase in a nonproductive and conformationally disordered complex Biophys. J. 80 2001 1791 1801
24. D. Yin, K. Kuczera, T.C. Squier The sensitivity of carboxyl-terminal methionines in calmodulin isoforms to oxidation by H(2)O(2) modulates the ability to activate the plasma membrane Ca-ATPase Chem. Res. Toxicol. 13 2000 103 110
25. R.K. Bartlett, R.J. Bieber Urbauer, A. Anbanandam, H.S. Smallwood, J.L. Urbauer, T.C. Squier Oxidation of Met144 and Met145 in calmodulin blocks calmodulin dependent activation of the plasma membrane Ca-ATPase Biochemistry 42 2003 3231 3238
26. H.J. Montgomery, R. Bartlett, B. Perdicakis, E. Jervis, T.C. Squier, J.G. Guillemette Activation of constitutive nitric oxide synthases by oxidized calmodulin mutants Biochemistry 42 2003 7759 7768
27. Z. Qin, T.C. Squier Calcium-dependent stabilization of the central sequence between Met(76) and Ser(81) in vertebrate calmodulin Biophys. J. 81 2001 2908 2918
28. C.B. Klee, T.C. Vanaman Calmodulin Adv. Protein Chem. 35 1982 213 321
29. G.M. Strasburg, M. Hogan, W. Birmachu, D.D. Thomas, C.F. Louis Site-specific derivatives of wheat germ calmodulin. Interactions with troponin and sarcoplasmic reticulum J. Biol. Chem. 263 1988 542 548
30. H.S. Smallwood, N.A. Galeva, R.K. Bartlett, R.J. Urbauer, T.D. Williams, J.L. Urbauer, T.C. Squier Selective nitration of Tyr99 in calmodulin as a marker of cellular conditions of oxidative stress Chem. Res. Toxicol. 16 2003 95 102
31. V.S. Sharov, N.A. Galeva, T.V. Knyushko, D.J. Bigelow, T.D. Williams, C. Schoneich Two-dimensional separation of the membrane protein sarcoplasmic reticulum Ca-ATPase for high-performance liquid chromatography-tandem mass spectrometry analysis of posttranslational protein modifications Anal. Biochem. 308 2002 328 335
32. H. Sun, J. Gao, D.A. Ferrington, H. Biesiada, T.D. Williams, T.C. Squier Repair of oxidized calmodulin by methionine sulfoxide reductase restores ability to activate the plasma membrane Ca-ATPase Biochemistry 38 1999 105 112
33. J. Gao, D.H. Yin, Y. Yao, H. Sun, Z. Qin, C. Schoneich, T.D. Williams, T.C. Squier Loss of conformational stability in calmodulin upon methionine oxidation Biophys. J. 74 1998 1115 1134
34. D. Lafitte, P.O. Tsvetkov, F. Devred, R. Toci, F. Barras, C. Briand, A.A. Makarov, J. Haiech Cation binding mode of fully oxidized calmodulin explained by the unfolding of the apostate Biochim. Biophys. Acta 1600 2002 105 110
35. J.P. Whitelegge, B. Penn, T. To, J. Johnson, A. Waring, M. Sherman, R.L. Stevens, C.B. Fluharty, K.F. Faull, A.L. Fluharty Methionine oxidation within the cerebroside-sulfate activator protein (CSAct or Saposin B) Protein Sci. 9 2000 1618 1630
36. H.L. Schenck, G.P. Dado, S.H. Gellman Redox-triggered secondary structure changes in the aggregated states of a designed methionine-rich peptide J. Am. Chem. Soc. 118 1996 12487 12494
37. G.P. Dado, S.H. Gellman Redox control of secondary structure in a designed peptide J. Am. Chem. Soc. 115 1993 12609 12610
38. D. Lafitte, A.J. Heck, T.J. Hill, K. Jumel, S.E. Harding, P.J. Derrick Evidence of noncovalent dimerization of calmodulin Eur. J. Biochem 261 1999 337 344
39. K.M. Downard, K. Biemann The effect of charge state and the localization of charge on the collision-induced dissociation of peptide ions J. Am. Soc. Mass Spectrom. 5 1994 966 975
40. G. Sonsmann, A. Romer, D. Schomburg Investigation of the influence of charge derivatization on the fragmentation of multiply protonated peptides J. Am. Soc. Mass Spectrom. 13 2002 47 58
41. L.A. Breci, D.L. Tabb, J.R. Yates III, V.H. Wysocki Cleavage N-terminal to proline Analysis of a database of peptide tandem mass spectra Anal. Chem. 75 2003 1963 1971
42. C. Gu, G. Tsaprailis, L.A. Breci, V.H. Wysocki Selective gas-phase cleavage at the peptide bond C-terminal to aspartic acid in fixed-charge derivatives of Asp-containing peptides Anal. Chem. 72 2000 5804 5813
43. G. Wang, R.B. Cole Disparity between solution-phase equilibria and charge-state distributions in positive-ion electrospray mass spectrometry. Org. Mass Spectrom. 29 1994 419 427
44. Y.-L. Chen, B.A. Collings, D.J. Douglas Collision cross sections of myoglobin and cytochrome c ions with Ne, Ar, and Kr J. Am. Soc. Mass Spectrom. 8 1997 681 687
45. V.S. Sharov, D.A. Ferrington, T.C. Squier, C. Schoneich Diastereoselective reduction of protein-bound methionine sulfoxide by methionine sulfoxide reductase FEBS Lett. 455 1999 247 250
46. R. Grimaud, B. Ezraty, J.K. Mitchell, D. Lafitte, C. Briand, P.J. Derrick, F. Barras Repair of oxidized proteins. Identification of a new methionine sulfoxide reductase J. Biol. Chem. 276 2001 48915 48920