Molecular cloning and expression of a cDNA encoding 1-deoxy-D-xylulose-5- phosphate synthase from oil palm Elaeis guineensis Jacq.

Plant Science

Volumn 169, Issue 3, 2005, Pages 571-578

  Khemvong, Sawitri ^a   Suvachittanont, Wallie ^a  

^a PRINCE OF SONGKLA UNIVERSITY   (Thailand)

Author keywords

Carotene; 1 Deoxy D xylulose 5 phosphate reductoisomerase; 1 Deoxy D xylulose 5 phosphate synthase; 2C methyl D erythritol 4 phosphate; Carotenoids; Elaeis guineensis Jacq.

Indexed keywords

BIOSYNTHESIS; CLONING; CONDENSATION; FRUITS; GENES; PHOSPHATES;

ACETATE/MEVALONATE (MVA); CAROTENE; MOLECULAR CLONING; OIL PALM;

DNA;

BIOSYNTHESIS; CONDENSATION; FRUITS; GENES; GLYCERALDEHYDE; NUCLEIC ACIDS; PHOSPHATES;

ELAEIS; ELAEIS GUINEENSIS; EMBRYOPHYTA;

EID: 22444438101     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2005.05.001     Document Type: Article

References (49)

1. J.C. Sacchettini, and C.D. Poulter Creating isoprenoid diversity Science 277 1997 1788 1789
2. J.L. Goldstein, and M.S. Brown Regulation of the mevalonate pathway Nature 343 1990 425 430
3. M. Rohmer, M. Knani, P. Simonin, B. Sutter, and H. Sahn Isoprenoid biosynthesis in bacteria: a novel pathway for the early steps leading to isopentenyl diphosphate Biochem. J. 295 1993 517 524
4. N. Campos, M. Rodríguez-Concepción, S. Sauret-gueto, F. Gallego, L. Lois, and A. Boronat Escherichia coli engineered to synthesize isopentenyl diphosphate and dimethylallyl diphosphate from mevalonate: a novel system for genetic analysis of the 2C-methyl-d-erythritol-4-phosphate pathway for isoprenoid biosynthesis Biochem. J. 353 2001 59 67
5. B.M. Lange, T. Rujan, W. Martin, and R. Croteau Isoprenoid biosynthesis: the evolution of two ancient and distinct pathways across genomes Proc. Natl. Acad. Sci. U.S.A. 97 2000 13171 13177
6. A. Disch, J. Schwender, C. Müller, H.K. Lichtenthaler, and M. Rohmer Distribution of the mevalonate and glyceraldehydes phosphate/pyruvate pathways for isoprenoid biosynthesis in cellular algae and the cyanobacterium Synechocystis PCC 6714 Biochem. J. 333 1998 381 388
7. J. Schwender, M. Seemann, H.K. Lichtenthaler, and M. Rohmer Biosynthesis of isoprenoids (carotenoids, sterols, prenyl side-chains of chlorophylls and plastoquinone) via a novel pyruvate/glyceraldehydes-3-phosphate non-mevalonate pathway in the green algae Scenedesmus obliquus Biochemistry 316 1996 73 80
8. H.K. Lichtenthaler, J. Schwender, A. Disch, and M. Rohmer Biosynthesis of isoprenoids in higher plant chloroplasts proceeds via a mevalonate-independent pathway FEBS Lett. 400 1997 271 274
9. J. Schwender, J. Zeidler, R. Gröner, C. Müller, M. Focke, S. Braun, F.W. Lichtenthaler, and H.K. Lichtenthaler Incorporation of 1-deoxy-d-xylulose into isoprene and phytol by higher plants and algae FEBS Lett. 414 1997 129 134
10. D. Arigoni, S. Sagner, C. Latzel, W. Eisenreich, A. Bacher, and M.H. Zenk Terpenoid biosynthesis from of 1-deoxy-d-xylulose in higher plants by intramolecular skeleton rearrangement Proc. Natl. Acad. Sci. U.S.A. 94 1997 10600 10605
11. M. Rohmer, M. Seemann, S. Horbach, S. Bringer-Meyer, and H. Sahm Glyceraldehydes-3-phosphate and pyruvate as precursors of isoprenic units in an alternative non-mevalonate pathway for terpenoid biosynthesis J. Am. Chem. Soc. 118 1996 2564 2566
12. B.M. Lange, M.R. Wildung, D. McCaskill, and R. Croteau A family of transketolase that directs isoprenoid biosynthesis via a mevalonate-independent pathway Proc. Natl. Acad. Sci. U.S.A. 95 1998 2100 2104
13. L.M. Lois, N. Campos, S. Rosa Poutra, K. Danielsen, M. Rohmer, and A. Boronat Cloning and characterization of a gene from Escherichia coli encoding a transketolase-like enzyme that catalyzes the synthesis of d-1-deoxyxylulose-5- phosphate, a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis Proc. Natl. Acad. Sci. U.S.A. 95 1998 2105 2110
14. G.A. Sprenger, U. Schörken, T. Wiegert, S. Grolle, A.A. De Graaf, S.V. Taylor, T.P. Begley, S. Bringer-Meyer, and H. Sahm Identification of a thiamin-dependent synthesis in Escherichia coli required for the formation of the 1-deoxy-d-xylulose-5-phosphate precursor to isoprenoids, thiamin, and pyridoxol Proc. Natl. Acad. Sci. U.S.A. 94 1997 12857 12862
15. 1) in higher plant chloroplasts Proc. Natl. Acad. Sci. U.S.A. 88 1991 2042 2045
16. 13C NMR investigation of the biosynthesis of pyridoxol in Escherichia coli J. Biol. Chem. 271 1996 30426 30435
17. T. Kuzuyama, M. Takagi, S. Takahashi, and H. Seto Cloning and characterization of 1-deoxy-d-xylulose-5-phosphate synthase from Streptomyces sp. Strain CL190, which uses both the mevalonate and non-mevalonate pathway for isopentenyl diphosphate biosynthesis J. Bacteriol. 182 2000 891 897
18. F.M. Hahn, L.M. Eubanks, C.A. Testa, B.S.J. Blagg, J.A. Baker, and C.D. Paulter 1-deoxy-d-xylulose-5-phosphate synthase, the gene product of open reading frame (ORF) 2816 and ORF 2895 in Rhodobacter capsulatus J. Bacterial. 183 2001 1 11
19. F. Bouvier, A. d'Harlingue, C. Suire, R.A. Backhaus, and B. Camara Dedicated roles of plastid transketolases during the early onset of isoprenoid biogenesis in pepper fruits Plant Physiol. 117 1998 1423 1431
20. K. Chahed, A. Oudin, N. Guivarch, S. Hamdi, J.C. Chenieux, M. Rideau, and M. Clastre 1-deoxy-d-xylulose-5-phosphate synthase from periwinkle: cDNA identification and induced gene expression in terpenoid indole alkaloid-producing cells Plant Physiol. Biochem. 38 2000 559 566
21. Y.S. Han, S. Roytrakul, M.C. Verberne, R.V.D. Heijden, H.J.M. Linthorst, and R. Verpoorte Cloning of a cDNA encoding 1-deoxy-d-xylulose-5-phosphate synthase from Morinda citrifolia and analysis of its expression in relation to anthraquinone accumulation Plant Sci. 164 2003 911 917
22. B.M. Lange, and R. Croteu Isoprenoid biosynthesis via a mevalonate-independent pathway in plants: cloning and expression of 1-deoxy-d-xylulose-5-phosphate reductoisomerase from peppermint Arch. Biochem. Biophys. 365 1999 170 174
23. J. Schwender, C. Müller, J. Zeidler, and H.K. Lichtenthaler Cloning and heterologous expression of a cDNA encoding 1-deoxy-d-xylulose-5-phosphate reductoisomerase of Arabidopsis thaliana FEBS Lett. 455 1999 140 144
24. S. Takahashi, T. Kuzuyama, H. Watanabe, and H. Seto A 1-deoxy-d-xylulose-5-phosphate reductoisomerase catalyzing the formation of 2C-methyl-d-erythritol-4-phosphate in an alternative nonmevalonate pathway for terpenoid biosynthesis Proc. Natl. Acad. Sci. U.S.A. 95 1998 9879 9884
25. F. Rohdich, J. Wungsintaweekul, W. Eisenreich, G. Rochter, C.A. Schuhr, S. Hecht, M.H. Zenk, and A. Bacher Biosynthessis of terpenoids: 4-diphosphocytidyl-2C-methyl-d-erythritol synthase of Arabidopsis thaliana Proc. Natl. Acad. Sci. U.S.A. 97 2000 6451 6456
26. F. Rohdich, J. Wungsintaweekul, M. Fellermeier, S. Sagner, S. Herz, K. Kis, W. Eisenreich, A. Bacher, and M.H. Zenk Cytidine-5-triphosphate-dependent biosynthesis of isoprenoids: YgbP protein of Escherichia coli catalyzes the formation of 4-diphosphocytidyl-2C-methyl erythritol Proc. Natl. Acad. Sci. U.S.A. 96 1999 11758 11763
27. F. Rohdich, J. Wungsintaweekul, H. Lüttgen, M. Fischer, W. Eisenreich, C.A. Schuhr, M. Fellermeier, N. Schramek, M.H. Zenk, and A. Bacher Biosynthessis of terpenoids: 4-diphosphocytidyl-2C-methyl-d-erythritol kinase from tomato Proc. Natl. Acad. Sci. U.S.A. 97 2000 8251 8256
28. H. Lüttgen, F. Rohdich, S. Herz, J. Wungsintaweekul, S. Hecht, C.A. Schuhr, M. Fellermeier, S. Sagner, M.H. Zenk, A. Bacher, and W. Eisenreich Biosynthessis of terpenoids: YchB protein of Escherichia coli phosphorylates the 2-hydroxy group of diphosphocytidyl-2C-methyl-d-erythritol Proc. Natl. Acad. Sci. U.S.A. 97 2000 1062 1067
29. S. Herz, J. Wungsintaweekul, C.A. Schuhr, S. Hecht, H. Lüttgen, S. Sagner, M. Fellermeier, W. Eisenreich, M.H. Zenk, A. Bacher, and F. Rohdich Biosynthessis of terpenoids: YgbB protein converts 4-diphosphocytidyl-2C-methyl- d-erythritol-2-phosphate to 2C-methyl-d-erythritol-2,4-cyclodiphos phate Proc. Natl. Acad. Sci. U.S.A. 97 2000 2486 2490
30. D. Siefermann-Harms The light-harvesting and protective functions of carotenoids in photosynthetic membranes Physiol. Plant 69 1987 561 568
31. B. Demmimg-Adam, and W.W. Adams The role of xanthophylls cycle carotenoids in the protection of photosynthesis Trends Plant Sci. 1 1996 21 26
32. D. DellaPenna Nutrition genomics: manipulating plant micronutrients to improve human health Science 285 1999 375 379
33. J. Hirschberg Production of high-value compounds: carotenoids and Vitamin E Curr. Opin. Biotechnol. 10 1999 186 192
34. S.T. Mayne Beta-carotene, carotenoids, and disease prevention in humans FESEB J. 10 1996 690 701
35. J.M. Estévez, A. Cantero, A. Reindl, S. Reichler, and P. León 1-deoxy-d-xylulose-5-phosphate synthase, a limiting enzyme for plastidic isoprenoid biosynthesis in plants J. Biol. Chem. 276 2001 22901 22909
36. H.P. Affek, and D. Yakir Natural abundance carbon isotope composition of isoprene reflects incomplete coupling between isoprene synthesis and photosynthetic carbon flow Plant Physiol. 131 2003 1727 1736
37. J. Sambrook, E.F. Fritsch, and T. Maniatis Molecular Cloning: A Laboratory Manual 1989 Cold Spring Harbor Laboratory Press USA
38. F. Sanger, S. Nicklen, and A.R. Coulson DNA sequencing with chain termination inhibitors Proc. Natl. Acad. Sci. U.S.A. 74 1977 5463 5467
39. J.D. Thompson, T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins The clustalX windows interface: flexible strategies for multiple sequence alignment aided by guality analysis tools Nucl. Acids Res. 24 1997 4876 4882
40. H. Nielsen, J. Engelbrectht, and S. Brunak A neural network method for identification of prokaryotic and eukaryotic signal peptidase and prediction of their cleavage site Int. J. Neurol. Syst. 8 1997 581 591
41. H. Nielsen, S. Brunak, and G. von Heijne Machine learning approaches for the prediction of signal peptides and other protein sorting signals Prot. Eng. 12 1999 3 9
42. O. Emanuelsson, H. Nielsen, and G. von Heijne ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites Protein Sci. 8 1999 978 984
43. D.F. Feng, and R.F. Doolittle Alignment and phylogenetic tree of protein sequences Meth. Enzymol. 1863 1990 375 381
44. A.E. Solovchenko, O.B. Chivkunova, M.N. Merzlyak, and I.V. Reshetnikova A spectrophotometric analysis of pigments in apples Russ. J. Plant Physiol. 48 2001 801 808
45. L.M. Lois, M. Rodríguez-Concepción, F. Gallego, N. Campos, and A. Boronat Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-d-xylulose-5-phosphate synthase Plant J. 22 2000 503 513
46. G. von Heijne, T. Hirai, R.B. Klösgen, J. Steppuhn, B. Bruce, K. Keegstra, and R.G. Herrmann CHLPEP: a database of chloroplast transit peptides Plant Mol. Biol. 9 1991 104 126
47. Y. Gavel, and G. von Heijne A conserved cleavage-site motif in chloroplast transit peptides FEBS Lett. 261 1990 455 458
48. J. Querol, M. Rodríguez-Concepción, A. Boronat, and S. Imperial Essential role of residue H49 for activity of Escherichia coli 1-deoxy-d-xylulose-5-phosphate synthase, the enzyme catalyzing the first step of the 2-C-methyl-d-erythritol-4-phosphate pathway for isoprenoid synthesis Biochem. Biophys. Res. Commun. 289 2001 155 160
49. G. Giuliano, G.E. Bartley, and P.A. Scolnik Regulation of carotenoid biosynthesis during tomato development Plant Cell 5 1993 379 387