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Funding for this project was provided by grants from National Institute for Allergy and Infectious Disease (NIAID) to N.M.E.-S. (AI4S038), K.S. and P.J.M. (AI045039), and B.A. (AI45061) and the Wellcome Trust (WT) to the Sanger Institute. We also thank NIAID, the Burroughs Wellcome Fund (BWF), WT, and the World Health Organization Special Programme for Research and Training in Tropical Diseases (WHO TDR) for providing funds for several Tritryp meetings. G.C.C is the recipient of a fellowship from the Conselho Nacional de Desenvolvimento Cientifico e Technológico (CNPq-Braiil). L. major genome accession numbers: AE001274, CP000078 to CP000081, NC_004916, AL389894, AL139794, and consecutive accession numbers CT005244 to CT005272. T. brucei genome accession numbers: Sequence data have been deposited at DDBJ/EMBL/GenBank with consecutive accession numbers CP000066 to CP000071 for chromosomes 3 to 8 and project accession numbers AAGZ00000000, AAHA00000000, AAHB0000000 for the whole-chromosome shotgun projects of chromosomes 9 to 11. The versions of chromosomes 9 to 11 described in this paper are the first versions, AAGZ01000000, AAHA01000000, and AAHB01000000, and unassembled contigs have accession number CR940345. T. cruzi genome accession numbers: This Whole-Genome Shotgun project has been deposited at DDBJ/EMBL/ GenBank under the project accession AAHK00000000. The version described in this paper is the first version, AAHK01000000. All data sets and genome annotations are also available through GeneDB at www.genedb.org.
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